Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ARR14(2)                                                     --------->ARR14(2)                                                     <---------ARR11(3)                                                     --------->ARR11(3)                                          --------->ANAC58                                  ---------  <-----------HVH21                       --------->ANAC46                                 --------->ANAC46 --------->YAB1                           --------->ANAC58                                <---------LBD16 -ANAC58                          --------->AHL20(2) --------->GLK1(2)                 <-----------GT1 -ANAC58    <----------DOF2 ---------->DOF2         <---------GLK1(2)       --------->GLK1(2)      --   caattgtcacatacctttgatcaaaaaccaaaaagattatatacaagaaaaacagaatcttgaatttcaagaacagagaatttgatattttacccggagt  7552900                                                               <---------GLK1(2)                                                           <---------At4g35610                                     <------MYB83          --------->At4g35610                                     ----------->GT1 <-------TEIL                                     <------MYB46(1)--------->GLK1(2)                                    --------->MYB111(2)  <------ZmHOX2a(1)         ---------->DOF2  -            --------->DAG2          --------->MYB46(2)<-----------RAV1(2)      --------->ZAT6  <----- >LBD16    ---------->DOF2    <------ZmHOX2a(1)    --------->ARR14(2)   <---------YAB1        <------ ------->ICU4              <---------LBD16         <---------ARR14(2)<---------MYB52(1)       -------   aatgtttcgaaggaaaagtgccttcgaaaccaggaagtttggtgataagagcagattcaggagctgattctgttattacaaacactaaagagagtaatgt  7553000                                                                                       --------------                                                                                       <----------DOF2                        ------>MYB83--------->ATHB12                                   <-------------                        ------>MYB46(1)                                      --------->ZAT14                      <---------MYB59                                       <-----------RAV1(1) --------->DOF2       --------->AtMYB61                                 <------ZmHOX2a(2) ------HVH21<----------DOF2     <---------YAB1                  ---------->DOF2       <---------ANAC58 ---bZIP60(1)      <-----------GT1 --------->ICU4           --------->AHL20(2)        <---------ANAC58 -->bZIP60(1)   --------->TOE2(3)  <---------YAB1 --------->ANAC46    <------ZmHOX2a(1)<---------DAG2   cacaaagacaaaaactttcattaaccaaaccattgtgattattgacataaacacagaatgaattaaaaaagaggatcactgtggtattgctttatataga  7553100                                  <-------GAMYB                                 --------->MYB111(2)                                 --------->MYB46(2)                                 --------->MYB55(2)                                 <---------MYB46(3)                        <---------RVE1(1)                       --------->ARR14(2)                       --------->ARR11(3)                       <---------ARR11(3)        ------>MYB83 <---------YAB1              --------->ARR11(3) --------->MYB111(1)  --------->DAG2              <---------ARR11(3) --------->MYB52(2)  ---------->DOF2                   --------->ANAC58    ---------->DOF2    <---------ARR14(2)       ----------->RAV1(1)                    --------->ANAC58 --------->ZAT6       <------ZmHOX2a(1)       --------->MYB46(3)   --------->ATHB12    --------->ANAC46 ->AGL15      --------->GLK1(2)<---------MYB52(1)------>MYB46(1) ------->TEIL --------->ATHB12  <---- --AGL15 ----------->GT1<---------CCA1(1)  ---------->DOF2 <---------YAB1    --------->ICU4   <------   ctaacacaaagaagaaaatctagaggatattttgttagttggccataaaccaacaaaaagtattatgaatgtttggaaaatgatttagcacgaaataagg  7553200                                                                                     <---------ARR11(3)                                                                            <------MYB46(1)                                                                           --------->MYB46(2)                                                                           --------->MYB111(2)                                                                           <---------MYB46(3)                                                                           --------->MYB111(1)                                                                          <--------P --------->ARR11(3)                                                                          <---------MYB55(1)                                                                        --------->ATHB12                                                       <---------------AGL15----------->GT1       ----------->GT1                                ===============================================      <---------HSFB2a(2)                             <-----------------AGL3<------MYB83   --------->GLK1(2)  ---------->DOF2 <---------AHL20(2)                <---------MYB46(3)          - --ZmHOX2a(1)   <----------ID1     ------->TEIL  --------->HSFB2a(2)   <---------TOE2(3)   <---------YAB1 ---TOE2(3)   ---------->DOF2 --------->CCA1(2)  <---------HSFB2a(2)   <---------YAB1<---------GLK1(2)   atgaaattctggtaaaaaaagacaaaaagatgatatgaatttttttgatttttagaacaaaatttggaaacttatggttggtatatagattttgtgattc  7553300                             *TSS              <---------------AGL15              --------------->AGL15              --------->TOE2(3)              --------->TOE1(3)             <-----------------AG             <-----------------AGL1             ----------------->AGL2                                 <----------DOF2             ----------------->AGL1                                <---------ANAC46             ----------------->AG                               <---------DEAR3(1)             <-----             <-----------------AGL2                          <---------ANAC58                 <------             ----------------->AGL3                       <---------WOX13(1)                 --------             <-----------------AGL3                      <------------CBF                   ---------     --------->MYB52(1)  --------->ANAC58               --------->ATHB12                    <--------     ----------->RAV1(1) --------->ANAC58               <---------MYB46(3)                --------->YAB1  --------->ANAC58  --------->ANAC46                   <---------YAB1                   --------->ANAC58  --------->ANAC58---------->DOF2           ---------->DOF2  <---------ANAC58           --------->ANAC58 =============================MADS_MADS  --------->HSFB2a(2) <---------ANAC46     <-----------GT1---- --------->DOF2------>ZmHOX2a(1)         <---------HSFB2a(2) <---------RAP2.6(2)  <---------AHL20(2)   tgcaaagcaacagtttccttaaaaggcacgattttgagcatttctataaagaaaatggtgattgcgtctgcgtttagttgttatttacataagcatgatt  7553400                                                                                            <------MYB83                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                       --------->ALFIN1                                                                                      ------->PIF5                                                                                      ------->MYC3                                                                                      -------->ABF1                                                                                      <-------MYC3                                                                                      <-------PIF5                                                                                      <-------MYC4                                                                                      <-------MYC2                                                                                      ------->MYC2                                                                                      ------->MYC4                                                                                     --------->O2                                                                                     --------->TGA1a                                                                                     <---------O2                                                                                     ================                                                          ----------->HVH21          <---------TGA1a                  <---------ANAC58                     --------->DAG2                <---------bZIP60(2)                  <---------ANAC58                    =========================================bZIP_DOF        <---------ANAC58                        --------->ARR14(2)                   >>>>>>>>>>ABI5     --------->ALFIN1                           <---------MYB52(1)                   <---------ANAC55(2)   <---------ANAC58                             <---------ARR14(2)                   --------->ANAC55(2)   <---------ANAC58                            --------->At5g28300              ----------->HVH21 ----WOX13(1)  --------->WRKY12               ----------->GT1                 ----------->GT1 ------CBF<------NtERF2<---------PCF5         <---------MYB46(3)    <---------ANAC58 >>>>>>>>>>AtMYC2 ->ATHB12------>NtERF2----------->HVH21    ------------>MYB.PH3(1)  <---------ANAC58 >>>>>>>>>>HY5 >ICU4  <---------ANAC46              <----------ID1  ---------->DOF2        --------->DAG2 <------MYB46(1) -YAB1  <---------ANAC58           --------->DAG2  --------->ANAC55(2)     ====================bZIP_DOF ----->ATHB12  --------->WRKY38(1)---------->DOF2  <---------ANAC55(2)     ---------->DOF2<---------ANAC58   gatttgagtggcgcgagttgacttgggaccgcttcttaaagtgacaagcggttacttaaagtgacgactggcttaacaaaaggtgacacgtggctggttt  7553500                                                          --------->AHL20(2)                                                       --------->ATHB12                                                       <---------ICU4                                                       --------->YAB1                                                       -------->HAHB4                                                      --------->ICU4                                                    <---------ICU4                         <---------ANAC58      ------>ZmHOX2a(1)                <---------TOE2(3)          --------->GLK1(2)       <----------DOF2   <---------ANAC58 <---------GLK1(2) =================bZIP_DOF            ---------->DOF2 <---------YAB1<---------AtMYB61--------->DOF5.7(2)   ttgtgaattctttttgttaagttttaggcgttttgtttggaaaagattcctacataatgattaaaaagttttggttttattttgaacgataacttctacg  7553600                                                --------->ATHB51                                                --------->ATHB12                                                <---------ICU4                                                <------------ATHB5                                                -------->ATHB1                                                <--------ATHB1                                               <---------ATHB51                      <---------ANAC46         --------->ICU4                      <---------ANAC58         <---------YAB1                  --------->ANAC58                      <---------ANAC58         <---------ATHB12                --------->ANAC58                --------->AHL20(2)           <---------------AGL15    --------->ARR14(2)                <---------AHL20(2)           --------------->AGL15    <---------ARR14(2)            ----------->GT1            <---------YAB1               --------->LBD16    <----------DOF2   --------->ANAC55(2)   ------------>ATHB5     <---------ANAC55(2)            ---   <---------ANAC58   <---------ANAC55(2)   <---------AHL20(2)     --------->ANAC55(2)           <---   <---------ANAC58  <-----------------------TaNAC69(2)   ----------->GT1    ---------->DOF2<--------   aattagctttcccattgttaaattacgtagaaaataaactgattattcaattattgggaatagtataatccgtattttggaaagcattttgaaatttatg  7553700                                                                                    --------->ZAT6                                                                                    --------->ANAC46                                                                                  <---------ALFIN1                                                                                 <-------TEIL                                                                                --------->TCP16(2)                                                                          <------ZmHOX2a(2)                                                                          --------->CCA1(2)          <---------TOE2(3)            --------->ARR11(3) <---------AHL20(2)   --------->ARR14(2)          <---------TOE1(3)     <---------ARR11(3)--------->ANAC58       <---------ARR14(2)   ---------->DOF2    <-----------GT1  --------->GLK1(2)  --------->AHL20(2)   <---------ARR14(2) -------->GT1<---------MYB52(1)<---------CCA1(2)---------->DOF2          --------->ARR14(2) ------TOE2(3)    <----------DOF2 >>>>>>>>>RAP2.2 --------->ANAC58       --------->AGP1 -AHL20(2)<---------YAB1  --------->TOE2(3)  <---------ZAT6<---------YAB1--------->ARR11(3)   aggttaaaagctatggttagcttttaaacctatatatctaaaatctagtggaaagcaaattttaatagaagaatagatccaggtccacactactattttg  7553800  Previous    Next  AGI:  At4g12910.1    Description:  SCPL20 (serine carboxypeptidase-like 20); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 20 precursor (SCPL20) [Arabidopsis Thaliana] (GB:Q8L7B2;GB:Q9SV78); similar to SCPL21 (serine carboxypeptidase-like 21), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G25420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17050.1); similar to wound-inducible carboxypeptidase [Lycopersicon esculentum] (GB:AAF44708.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 7550431    to: 7553329    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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