Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------GLK1(2)  <---------ARR14(2)                                          --------->ICU4  --------->ARR14(2)                                        ---------->DOF2 ------->YAB1                                            --------->ANAC58                   --------- ------>At4g35610                                        --------->ANAC46                 --------->ANAC46 ----->ANAC58                                            --------->ANAC58        --------->ANAC46 --- ----->ANAC58     --------->ARR11(3)                ---------->DOF2              --------->ANAC58---- ->ANAC58         <---------ARR11(3)              <---------HSFB2a(2)   ----------->GT1 <-----------GT1 ->ANAC46     ---------->DOF2                  --------->GLK1(2)     ----------->RAV1(1)--------->ANAC46 ->ANAC58   --------->ANAC46                  <---------GLK1(2)--------->ATHB12  --------->ANAC58----   agcagaacctctccacaaaagctcttgaaattaacaaatacagtgaaagattctaaaagacgcaaagattgcaacagttatataagcaatacaccagaca  7519000                                      ---------->DOF2                                       <------ZmHOX2a(2)      ------>MYB46(1)           --------->PCF2                                         ---------->DOF2      ------>MYB83              <---------TCP15(1)                               ----------->GT1   <- >ANAC46   <---------ALFIN1   ----------->HVH21      --------->ANAC58         ---------->DOF2      -- ------>AtMYB61             <---------TOE1(2)        --------->ANAC58       ----------->HVH21      -- ----->ANAC58          <-----------HVH21      --------->ANAC58       --------------->AtSPL3--------->ARR11(3) ----->ANAC58         <-----------RAV1(1)     --------->ANAC58       --------------->AtSPL8<---------ARR11(3)   cctaaaccaaacaacactctcaaaatgtcgcagggacccataaaccagaagcaagaagcaatagacacatttcagtacctgaaaggcaaaaaagatcaaa  7519100                                                                                 >>>>>>>>>SARD1                                                                            --------->ANAC58                                                                            --------->ANAC58             <-------TEIL                                                <----------ID1    --------->ZAT6                                                     ---------->DOF2 ---------DOF2                           ----------->RAV1(1)      <---------MYB59>>>>>>>>>CBP60g ------->TOE2(3)                         <---------ALFIN1         --------->TOE2(3) ------->TOE1(3) --------->ATHB12 ---------->DOF2                 --------->TOE1(3)   actttaacactcacatacatgatttagctagggttttaaagacccacataaacccatgaaatagataacctaaaaaagacgaaatttgggagagaaattg  7519200               <---------RAP2.6(3)               ------>NtERF2               ----------->RAV1(1)              <---------ETT(1)              ------->GAMYB              --------->At1g77200              --------->DREB2C(2)              --------->RAP2.3(3)              --------->RAP2.6(2)              --------->DEAR3(1)             --------->RAP2.3(1)                                   --------->ANAC58             --------->DEAR3(2)                                  --------->At4g35610            <---------ATERF1(1)                                --------->YAB1            --------->ZAT2<-----------GT1                   --------->YAB1            <---------At4g35610                    ----------->GT1 --------->ANAC58            --------->At4g35610        --------->ANAC58    <---------AHL20(2)         --------->GLK1(2)         --------->At4g35610           --------->ANAC58--------->AHL20(2)        ----------->GT1   aagaaattagaagcagccgacaaaaatttcacaaggttgaaacgaaacccagaaggaataaataatcagaagcatcaatggagaagaaaatcggaatcag  7519300             <----------DOF2      --------->ATHB12     <---------YAB1     --------->ICU4   <---------ICU4                                                    ---------->DOF2   -------->HAHB4                                                --------->ANAC46   --------->YAB1                                                --------->ANAC58             <------  <---------YAB1      ----------->HVH21                          --------->ANAC58             -------  --------->ICU4      --------->WRKY12                 --------->TOE2(3)           <------ZmHOX2a(1)  <---------ATHB12  <----------DOF2      <----------DOF2 ---------->DOF2          ----------->GT1   agaaatgattattgactttcacctttgacgcgtcttcgtttttctttgctctcaaaacctaaagctcaagcaaaagaagaagagaggaaatttcaagagc  7519400                     --------->AHL20(2)                   *TSS <---------YAB1                 <---------ANAC46       <---------TOE1(3)                <---------AHL20(2)   -------                 <---------ANAC58       <---------TOE2(3)               <---------AHL20(2)  ---------                 <---------ANAC58<----------DOF2                        --------->AHL20(2)  <--------             <-------GAMYB---------->DOF2     <----------DOF2 <---------ICU4              -----------            <-----------RAV1(1) <-----------------AGL3        --------->YAB1             --------->AHL20(1) ---ARR11(3)--------->MYB52(2)--------->ARR11(3)  <---------TOE2(3) <---------DAG2       <---------AHL20(1) -->ARR11(3)<---------MYB46(3)<---------ARR11(3)  <---------TOE1(3) <----------DOF2----------->GT1  -   ttcagttttttggtttgttgcgttttattaaagaccttttttagggttctttatggtttttcattcattacttttttaatagtggtcgtaatatataaat  7519500                                                                                            <-------PIF5                                                                                            ------->MYC2                                                                                            <-------MYC3                                                                                            ------->PIF5                                                                                            <-------MYC2                                                                                            ------->MYC3                                                                                           --------->O2                                                                                           --------->TGA1a                                                                                           <---------bZIP60(2)                                                                                           <---------ANAC46                                                                                           <---------O2                                                                                           <---------TGA1a                                                                                        ----------->HVH21                                                                                   ------->MYC3                                                                                   <-------MYC3                                                                                  <---------O2                                                                                  --------->O2                   --------->AHL20(2)                             --------->ARR11(3) <-----------HVH21                   <---------ICU4                             ---------->DOF2     <---------TGA1a                   <---------AHL20(2)                         =======================================bZIP_DOF                   --------->ATHB51                       --------->AtLEC2        --------->TGA1a                  --------->ICU4                          --------->ANAC58       ------>MYB83-------- -->WOX13(1)   <---------AHL20(2)                         --------->ANAC58       ------>MYB46(1) >AHL20(2)   --------->ANAC55(2)                     <-----------GT1           --------->AtMYB61 -AHL20(2) <-----------GT1<---------AHL20(2)        ----------->HVH21          --------->DEAR3(1) >TBP <----------DOF2<---------YAB1                 --------->WRKY38(1)       --------->MYB46(3) <--- --------->DOF2--------->AHL20(2)        --------->At4g35610  ==============================bZIP_DOF   caaaaagacttttttacttaattattttttaattctttgaaacagctaaacgatttgaccatgcaaaagaactagtctccaccaacgtgtctcacgtgga  7519600                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                        ------------------------>ANAC81<---------RVE1(1)                  ----------- ->ALFIN1              xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         --------->AHL20(2) ---ZmHOX2a(2)  --------->AtLEC2              --------->YAB1 <-----------GT1      <---------AHL20(2)   tcaaaaacaatgggttttatgcaaaaaaaaaaaaaaaaaaaaacacattcaaaatcgatatttttacaattttagtttttagatttaaaaaatagaaaat  7519700                                <---------------AGL15                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                --------------->AGL15                               <-----------------AGL3                               <-----------------AGL2                               ----------------->AGL3                             <---------ARR11(3)                           --------->ARR11(3)    <---------WOX13(1)     <---------ARR11(3)                                                      <-  --------->ATHB12         <---------AHL20(2)                                                -------- <---------AHL20(2)        <---------AHL20(1)                                                <------- <---------YAB1            --------->AHL20(1)                          <------ZmHOX2a(2)     -------- ----->AHL20(2)      --------->ANAC55(2)                          <-----------GT1           <-------- ------AHL20(2)      ----------->GT1                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --- ----->AHL20(1)  --------->AHL20(2)                        <---------TOE2(3)            --------->AHL20(2) -----AHL20(2) --------->AHL20(2)                         <---------DOF5.7(2) <---------AHL20(2)<---- ---->AHL20(2)--------->YAB1<---------CCA1(2)        --------->ZAT6   <-----------HVH21 <---------AHL20(2) >GT1   ------->TEIL <---------ANAC55(2)         <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   aatttgattgaatctaaaataatatgtaatatatctaattttagtttgcaactttacagtaaacgttttcacgatcacatatatttgtgtttaaatattt  7519800   --------->CCA1(2)                                                                         <-------  --------->ARR11(3)                                                                         <-------  <---------ARR11(3)                                                              <---------AHL20(2) --------TOE2(3)                                                                  --------->AHL20(1) ->AHL20(1)                                  --------->AHL20(2)           --------->YAB1     <------- --AHL20(1)                                 <---------AHL20(2)<---------TOE2(3)   --------->AHL20(2) ->AHL20(2)                              <---------AHL20(1)  <-----------GT1----------->GT1  <------- -AHL20(2)        <---------ICU4         --------->AHL20(1) <-----------GT1 <---------YAB1   <------- ------->DOF2xxxxxxxxxxxxxxxx>smallRNA(i)--------->AHL20(2)<---------AHL20(2)    --------->AHL20(2)<- -----AHL20(2) --------->YAB1 --------->GLK1(2)     --------->YAB1   <---------TOE2(3)       --------   taaagatatagttgaattcatcatctcgagagattccatttgatatattatttatcaaaattttaacatttgacgataatgaaaaaaattgaattgcgta  7519900  Previous    Next  AGI:  At4g12790.1    Description:  ATP-binding family protein. similar to EMB1705/QQT1 (QUATRE-QUART1) [Arabidopsis thaliana] (TAIR:AT5G22370.2); similar to EMB1705/QQT1 (QUATRE-QUART1), ATP binding [Arabidopsis thaliana] (TAIR:AT5G22370.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98543.1); contains InterPro domain Protein of unknown function, ATP binding; (InterPro:IPR004130) Range:  from: 7517052    to: 7519419    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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