Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ATHB12                                                                                        ------>ZmHOX2a(2)                                                                                <---------SPL7         <---------ARR11(3)              <---------ZAT6                        --------->ANAC55(2)---         --------->ARR11(3)       <---------MYB52(1)                     <---------HSFB2a(1)      <--    ------>NtERF2            <---------ARR14(2)              -------->P  --------->HSFB2a(1)   <----- ------->MYB46(3)            --------->ARR14(2)  <------ZmHOX2a(1)       --------->HSFC1(2)    <-----   aactgccgagacatcttccaatgtggaagaagacccgtttgtagtcttggaggagtctgaatcaacccctagagaaccctcccgtactgatccattggac  7513900                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                 <------ZmHOX2a(1)               ------->GAMYB                --------->ANAC46                                        <              --------->MYB46(3)         --------->ETT(2)                                           -   ----------->GT1                       <---------ETT(2)                                        <--- ------>ARR11(3)<---------At4g35610      <---------REM1(2)                           <------ZmHOX2a(1) -------ARR11(3)--------->At4g35610 --------->At4g35610           <-----------GT1--------->TOE1(2)--- ------------AG----------->RAV1(1)  <---------At4g35610 <---------MYB46(3)       --------->TOE2(2)<-- ------------AGL1            <---------YAB1<---------LBD16   --------->ARR11(3)--------->GLK1(2)<----   gatattggtaaattcaacagcagaaaaactgatcattcatctgtccacggaggagtatttgttgatattgaccctcttgataatctaggaaaaccagggc  7514000        --------->YAB1   <---------YAB1 --------->GLK1(1) --------->CCA1(2)                                              ----------->RAV1(1) ---------ARR14(2)                                             <---------ALFIN1          ------------ -------->ARR14(2)                            --------->ATHB12 --------->AtMYB61         <----------- ------ANAC46                               --------->TOE2(3) --------->MYB46(3)        <---------YAB1 ------>LBD16                          <------ZmHOX2a(1)  <-----------HVH21           <-----------GT1 ----NtERF2                       ----------->RAV1(1)    --------->ANAC46     <---------LBD16 -----LBD16---------->DOF2       --------->AtMYB61  <---------PCF2      ---------->DOF2 -------------   cggatatgaatagtaaagggaagagtcatttaagaccaccaggaaacatcagtggctcccagtcaccaccagtagaaagccctgggagttaccattctaa  7514100                                                    -------->P                                                    ------>MYB83                                                    ------>MYB46(1)                                                   --------->MYB55(1)                                                  <---------MYB111(1)                                                  <---------MYB55(2)                                                  --------->MYB46(3)                                                  <---------MYB46(2)                                                  --------->AtMYB61                                               --------->DEAR3(1)                 <---------At4g35610                                               <---------ALFIN1                <---------At4g35610               <---------RVE1(1)               --------->AtMYB61        <---------ANAC58      <------               <---------CCA1(1)            <---------ALFIN1        <---------HSFB2a(1)       <------    <-------TEIL          ----------->RAV1(1) --------->MYB46(3)    --------->HSFB2a(1)       <------ --->AGL15    <---------ARR11(3)            --------->ANAC46        <---------HSFC1(2)   --------->ALFIN1 ----AGL15    --------->ARR11(3)    --------------->AtSPL8          --------->HSFC1(2) <---------ANAC46 ---->AGL1    <---------GLK1(2)    <---------YAB1 <---------MYB111(2)   <---------ANAC58 <-----------RAV1(1)   gaaagtttcatttgaagattttttagagccacataatatgagtactccaccacctaccaattcaaatggaagtttcgagtcgtctgatgatgtgtggctt  7514200                                                 --------->ANAC46                                        --------->ANAC58                      --------->ANAC58  --------->ANAC58                      --------->ANAC55(2)--------->LBD16                      <---------ANAC55(2)------>NtERF2         <---------ARR14(2)             --------->ANAC46         --------->ARR14(2)             --------->DEAR3(1)                 --------->bZIP60(2)         --------->ARR11(3)         --------->ZAT14                        --------->ANAC46         ----------------------->TaNAC69(2)     ------>MYB83             <---------ALFIN1         --------->ARR14(3)   ------>MYB46(1)   ------>MYB46(1)         ------>MYB83         <---------ARR14(3)   ------>MYB83  ------>NtERF2               ------>MYB46(1)         <---------ARR11(3) --------->TOE2(2) --------->TOE1(2)       --------->AtMYB61        <---------GLK1(1) --------->ANAC58 --------->DEAR3(1)--------->AtMYB61        --------->GLK1(1) --------->ANAC58 <---------ALFIN1  <---------ALFIN1       <---------AHL20(2)      --------->LBD16 --------->ANAC58 <---------LBD16    --------->ANAC46 --------->ANAC58  --------->ARR14(2)  --------->ANAC55(1)<---------ATERF1(1)--------->MYB46(3)  ------>ZmHOX2a(1)  ------->TEIL    <----------DOF2   <---------ZAT14    --------->AtMYB61-------->P --------->AHL20(2)  <---------ARR14(2)  --------->ANAC46<---------ATERF1(1) <---------ALFIN1 --------->ANAC58 --------- ---ANAC46     <---------ALFIN1     --------->ZAT18  <---------ARR11(3) <---------REM1(2) xxxxxxxxxxx ---ANAC58 ------>ZmHOX2a(2)--------->TOE1(2) --------->AtMYB61     <---------ARR11(3)=============== ---ANAC58<------ZmHOX2a(2)--------->MYB46(3) --------->TOE2(2)     --------->ARR11(3)---------->DOF2   actgtatccgagatccccctctttacgcaacctacgagtgctccgccacctacgagacctccaccaccaagacctacacgtcctattaaaaagaaggtta  7514300                                             <---------LBD16                                   <-------MYC2                                   ------->MYC2                                   <-------MYC3                          --------->ZAT6     <-----------RAV1(2)     ----------->HVH21                    <---------At4g35610   <---------ZAT2             --------->ANAC58                 *TSS   -------->P ------->MYC3                      --------->ANAC46               --------->O2       --------->ANAC58                   <---------ETT(1)               ==================MYC_MYB  --------->ZAT2  ----------->GT1               <---------TGA1a    --------->ANAC46        <---------HSFB2a(2)               --------->TGA1a    --------->ANAC58     --------->GLK1(2)   <---------GLK1(2) ------->TEIL  <---------O2     <---------ALFIN1    --------->ARR11(3)----------->RAV1(1) -->GT1    --------->DEAR3(2)----------->HVH21  <------ZmHOX2a(1)    --------->ANAC58 xxxxx>smallRNA(i)  --------->At4g35610 ------>ZmHOX2a(1) --------->HSFB2a(2)--------->At4g35610 ========================bZIP_DOF<---------TOE1(2)  <---------ARR11(3)<---------ALFIN1     ------->TEIL   atgagccttctataccgacgtctgcttaccactcacacgttcctagctcaggaagagcttctgtaaatagcccgacagcatctcaaatggatgaactcga  7514400                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                    ------>ZmHOX2a(1)                         -------                                                ------>ZmHOX2a(1)                           <--------                                        ----------->RAV1(2)                          ------>NtERF2                                      <---------ARR11(3)                             <---------At4g35610                                      --------->ARR11(3)           <---------At4g35610     <---------At4g35610                                      --------->ARR14(2)         <-----------RAV1(2) --------->At4g35610                                      <---------ARR14(2)         ============================RAV <---                            ------>NtERF2 ------>ZmHOX2a(1)     <-------TEIL   <---------At4g35610                         <---------At4g35610  =============HOX2a_HOX2a     <-----------GT1<----------                --------->GLK1(1)    <---------GLK1(1)        --------->ARR14(2) ====================                <---------GLK1(1)    --------->GLK1(1)        <---------ARR14(2) <-----------RAV1(1)-   <-----------GT1       --------->At4g35610  ------>ZmHOX2a(2)--------->CCA1(2) ====================   cgatttttctattggcagaaatcagaccgctgcgaatggatatcctgatccttcctctggtgaagattcagatgttttttctactgccgctgcatcagct  7514500 ------ZAT2 ----->At4g35610 ----->ZAT2 -->At4g35610 -->ZAT2 ---ZAT2 ---At4g35610 ---->RAV1(2) ---RAV1(2)                     ---------->DOF2     ---------->DOF2 ------At4g35610             --------->ANAC58      <------ZmHOX2a(1)         --------->ANAC58       - -HVH21               --------->DAG2        --------->ANAC58     ----------->GT1                    < ===RAV<---------TOE2(3)     --------->ANAC58    <---------TOE1(3)           --------->ANAC58      -- ----->NtERF2        ---------->DOF2        --------->ANAC58   ---------->DOF2                     <- =====RAV<------ZmHOX2a(1) --------->At4g35610   <---------TOE2(3)         ---------->DOF2       <---   gctgccatgaaggatgccatggataaagcagaagcaaagtttaggcatgctaaggaaaggagagagaaagaaaatttgaaagcaagtagaagtagagaag  7514600              --------->YAB1             --------->ICU4 <------ZmHOX2a(2)         ---------->DOF2 -------->ARR11(3)       ----------->HVH21 ---------ARR11(3)     <---------ANAC46      --------->ANAC58 ------->GLK1(1)  <---------GLK1(2)          --------->ANAC58             <------NtERF2        ------ --------GLK1(1)<---------YAB1              --------->DAG2             --------->ZAT18<------NtERF2 ---ZmHOX2a(1)<---------ICU4               ---------->DOF2     <-----------HVH21   <------NtERF2-----   gagatcacacagaaaattatgattctcgtgaaagggaacttagagaaaagcaagtgagattggaccgtgagagggcagagagggaggcagagatggaaaa  7514700                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                      <------NtERF2                                                                     <---------MYB46(3)                                                                  <------MYB83    <------ZmHOX2a(1)                                             <------MYB46(1)             <------ <-----------RAV1(2)             --------->At4g35610             <---------AtMYB61<------NtERF2 <---------LBD16          ---------->DOF2      ---------->DOF2--------->ATHB12    <-------GAMYB ---->DOF2         <------ZmHOX2a(1)  ---------->DOF2        --------->ICU4 <-----------RAV1(2) ---->DAG2   ---------->DOF2     <---------At4g35610 ---------->DOF2<---------RAP2.6(2)  --------->ZAT18   agcccaggagagggagaaagaggagagagaaagagagcagaaaagaattgaaagagaaagggaaagattggtggctagacaggcggtagagagggctaca  7514800  Previous    Next  AGI:  At4g12780.1    Description:  auxilin-related. similar to heat shock protein binding [Arabidopsis thaliana] (TAIR:AT4G12770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71688.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) Range:  from: 7514317    to: 7517002    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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