Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->LBD16                                            <---------LBD16                                          <---------ARR14(2)                                          --------->ARR14(2)                                          --------->GLK1(2)                                         <------NtERF2                                         --------->ATERF1(1)                                       <---------ANAC58                                       <---------ANAC58                                      <------NtERF2                                      --------->ATERF1(1)                                      <---------LBD16                                     ------>NtERF2                                     <---------MYB46(3)                             <---------DEAR3(1)                                    --------->ALFIN1                                <---------At1g77200                                    ----------->HVH21                              <---------MYB52(1)                                    <---------DEAR3(1)                             <------NtERF2                                   <---------MYB52(1)                             <-----------HVH21                                <---------LBD16     <---------WOX13(1)           --------->DEAR3(1)                              --------->ARR14(2)   >>>>>>>>>GATA-2              <------NtERF2                              <---------ARR14(2)   >>>>>>>>>GATA-3              --------->DEAR3(2)                             <---------HSFC1(2)    >>>>>>>>>GATA-4              --------->ATERF1(1)                             <---------HSFB2a(1)   >>>>>>>>>GATA-1              --------->RAP2.3(1)                         --------->LBD16<---------MYB46(3)                     <---------At4g35610 --------DOF2           --------->HSFB2a(2) ------>ZmHOX2a(2)                --------->ATERF1(1) ------DAG2             <---------HSFB2a(2)<------ZmHOX2a(2)               --------->ALFIN1------>ZmHOX2a(2) >NtERF2             ------->TEIL --------->LBD16<---------MYB46(3)     <---------AtMYB61--------->ARR11(3) -At5g28300          <---------ARR14(2)<---------ANAC46              --------->ALFIN1<---------DEAR3(2) --GT1      --------->ICU4   --------->HSFC1(2)<---------MYB52(1)<------NtERF2--------->TCP20   cttttatatcggtgatgttgatgtatccagaagttccggtggcggatccggtggattgaaacatggaggcagtggaggtggagccgtcggtgatctggtg  7492500                                                             <---------ZAT6                                                        <------MYB46(1)                                                        <------MYB83                                                       --------->MYB111(1)                                                       --------->MYB59                                --------->REM1(2)   --------->ARR14(2)                               --------->ALFIN1     <---------ARR14(2)                              <-------PIF5        --------->LBD16                  --------->ALFIN1                              ------->PIF5       <---------ANAC46                <------ZmHOX2a(1)          <------NtERF2      <---------ANAC58    --------->ANAC55(2)     <---------MYB52(1)         ------>NtERF2       <---------bZIP60(2) <---------ANAC58       <-----------HVH21   <---------ANAC58          <---------ANAC46    <---------ANAC58   <---------ARR14(2)   <---------ANAC46          <---------ANAC58   <---------LBD16     --------->GLK1(2)   <---------ANAC58        <------ZmHOX2a(1)<-----------RAV1(1)     --------->ARR14(2)  <------ZmHOX2a(1)   aagtttcttggtgccgaagtaatcgaccaggacgtggagagagagaatgttgcggatttggtagagtgagtatccgttagagaggatggaggacattgct  7492600                                    <--------P                                   <-------GAMYB                                  <---------DEAR3(2)                                  --------->MYB55(2)                                <------NtERF2                                <---------MYB52(1)                                --------->ATERF1(1)                               <---------RAP2.3(1)                               <---------ATERF1(1)                               --------->LBD16                               ------>NtERF2                               <---------ERF1  ------>NtERF2                              <---------RRTF1(2)                              <---------DREB2C(2)                              <---------RAP2.3(2)                              <---------RAP2.6(2)                              --------->ATERF1(2)                              <---------DEAR3(1)<------NtERF2                              <---------ATERF1(2)                              <---------RAP2.3(3)                             <---------LBD16   <---------DEAR3(2)                         <---------ANAC58     <---------At1g77200                         <---------ANAC58     <---------DEAR3(1)                        --------->GLK1(1)                   <---------YAB1<---------DEAR3(1)                                     <---------GLK1(1)                  --------->At5g28300       <-----------HVH21                      ----------->GT1                <---------DEAR3(1)<---------MYB46(3)                          ---------->DOF2        ------>NtERF2 <---------WOX13(1) ------>ZmHOX2a(2)               <---------MYB46(3)    <-----    --------->ETT(2)<---------MYB46(3) --------->ARR11(3)   --------->At4g35610   --------->ALFIN1<--   gagttatcgacggccaagacggtgattgtttgccggcggttgatctcgtcggcgagatgagtcgctgagagatagtggttgaaagtggagaaatcagggt  7492700                                                                                           <------NtERF2                                                                                          --------->LBD16                                                                                         --------->DEAR3(1)                                                                                   --------->ZAT2                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                                   <---------ZAT2                                                                                 <---------RAP2.3(3)                                                                                <---------At4g35610          <-------TEIL                                                          <------NtERF2         --------->GLK1(2)                                                      --------->ATERF1(1)         --------->ARR14(1)                                                    <---------MYB46(3)         --------->CCA1(2)                                                     ------>NtERF2       --        <---------ARR14(2)                            <---------ZAT2           --------->ABI4(2)   <-        --------->ARR14(2)                            <---------At4g35610      --------->MYB55(2)----        <---------GLK1(2)                             --------->At4g35610      <---------ATERF1(1) <-        --------->ARR11(1)                            --------->ZAT2          --------->ALFIN1   ----      ----------->ARR10                           --------->ALFIN1            <---------DEAR3(1) ---- ----ARR11(3)             <-------TEIL          --------->CCA1(2)          <---------DEAR3(1)  ------ --------DOF2          <---------ANAC46    ---------->DOF2           --------->MYB46(3) <---------LBD16   ctttggccaagattcgggttatgttatgtgcatttgagagagagagaaagagatggagctggaaaatgagaaccaatgcggtggctgctcgccggagata  7492800          --------->ALFIN1        <---------ANAC58                                                          --------->CCA1(2)        <---------ANAC58    <---------YAB1                                       <---------ARR11(3)        <---------ANAC46<------NtERF2                                      <---------YAB1       <---------MYB46(3) <----------DOF2                                <---------ICU4  --------->ICU4       ------>NtERF2                                     --------->YAB1 --------------->AGL3 <---------RAP2.3(2)                                *TSS---------->DOF2 ----------------AGL2 <---------DEAR3(1)    <---------AtMYB61            -------->HAHB4 ----->ANAC46   --------->ARR14(2)        <-----------RAV1(1)           --------->ICU4 ----------------AGL3 <---------RAP2.6(2) <---------ANAC46             <---------AHL20(2)       ----- ----->ANAC58   <---------ARR14(2)        <---------ANAC58            --------->YAB1    <---------AHL20(2) ----->ANAC58  --------->ATHB12           <---------ANAC58           <---------YAB1    --------->AHL20(2) --->CCA1(2)   <------ZmHOX2a(1)    <------ZmHOX2a(1)        <------ZmHOX2a(1)   --------->ARR11(3)   agccatttttgggtggaggattgggcggctttgatagaggaattgtgtggtagcatttggagaggagtcttataataatgaaagatatataaaatagatt  7492900                                         --------->MYB111(1)                                         --------->MYB111(2)                                    <-----------RAV1(2)                                   --------->ZAT2                                   <---------ZAT2                                   --------->At4g35610                                   <---------At4g35610                                  ----------->RAV1(1)                                --------->ZAT2                                <---------ZAT2 --------->ZAT18                                <---------At4g35610                                --------->At4g35610                               =================RAV                               ----------->RAV1(1)                    <---------ARR14(2)  <--------P  <---------REM1(2)        --------->At4g35610  <---------ZAT18 <---------ZAT18        --------->ZAT2       --------->ZAT14 --------->ZAT18        <---------At4g35610<---------At4g35610 <---------PCF2        <-----------HVH21    <---------ETT(2)     ---------->DOF2--------->ARR14(2)--------->ANAC58    <---------ANAC58                --------->ETT(2) ---->AHL20(2)     <----------TaMYB80 --------->ANAC58    <---------ANAC58     ---------->DOF2   atatgaacaaagctgtctcgcatatttccagcgcagcagcaggtaagtgggctctacatagcttgagtctgggtcacatttgaaagtaagtgtcgacgag  7493000                                           --------->AHL20(2)                                           <---------AHL20(2)                                        <---------ARR11(3)                                        ---                               <------NtERF2                                                    -----                    --------->ICU4      <---------AHL20(1)                                      <----                 <------ZmHOX2a(1)      --------->AHL20(1)     <-------TEIL           --------->ZAT6               <---------TOE2(3)        --------->AHL20(2) <-------TEIL             <-----------GT1          <---------ZAT6      <---------LBD16       <----------DOF2     ----------->HVH21   ---------   agaaacacattagtgtttaggaaatattaaggcccggttcaatattttattcggctctaggtacatacgtagacatgaccaaaatttaactgtaacagta  7493100                 --------------->AGL15                 <---------------AGL15                                                      <------ZmHOX2a(2)                ----------------->AGL3                                                   <------MYB83                ========================================================================MADS_MADS                <-----------------AGL2                                                   <------MYB46(1)                ----------------->AGL2                                                 <--------P                ----------------->AG                                                --------->DAG2          <---------YAB1                                                --------------->AGL15        <---------AHL20(2)                         <-----------GT1      <---------------AGL15  ======       <---------YAB1                      ------>MYB83                 <---------HSFB2a(2)<---------ARR14(2)    <---------AHL20(2)            --------->AHL20(2)   <----------DOF2  --------->HSFB2a(2)--------->ARR14(2) <---------AHL20(1)     <---------TOE2(3)  ------>MYB46(1)             <-----------------AGL2  ====== -------->GT1   <-----------------AGL3   --------->TOE1(2)             <-----------------AGL3  ------ ---->ZAT14     =========================================================================MADS_MADS -----ZAT14   <-----------GT1     <---------AHL20(2)<-----------GT1    ----------------->AGL3------>ZmHOX2a(2) >ZAT6<---------AHL20(2)--------->MYB59<-----------------------TaNAC69(2)         ---------->DOF2   tagtatatttttatttttaccaattttaggtataatttaaatacctacaaaatttaactttcatcttcgtatttctataaacgggaaaggttggatccta  7493200                                                                                        <---------DEAR3(2)                                                                                        <---------MYB46(3)                                                                       --------->ARR14(2)                          <---------GLK1(1)                            --------->ARR14(3)    <-------                          <---------At4g35610                          <---------ARR11(3)    <-------                          --------->GLK1(1)                            --------->ARR11(3) <---------MYB52(1)                        <---------PCF2                    <---------ANAC58             <---------DEAR3(1)                    --------->TOE1(2)                     <---------ANAC58           <-----------HVH21                   ------>ZmHOX2a(2)                      <---------ANAC46          <---------ANAC58          --------->CCA1(2)--------->ARR11(3)          <---------MYB52(1)           <---------ANAC58 ---------->DOF2  <------ZmHOX2a(2)             <----------DOF2        <---------GLK1(2)--------->MYB55(2) ========================HOX2a_HOX2a            <---------DAG2---------->DOF2     <---------DOF5.7(2) =========================HOX2a_HOX2a          <---------ANAC58        <---------ARR14(3)<-------GAMYB >ZmHOX2a(1)     <---------ARR14(2)            <---------ANAC58      ----------->ARR10 <---------At1g77200   ttggaaagtaagagacgacgatcgtgggagctcttggagacttggttttgcttttcggtttcttgaaaggcaagattttcaagttagcgtcggttgtgtt  7493300                           --------->ANAC46                           --------->ANAC58           --------->ARR11(3)  --------->LBD16          --------->ANAC58                                                        -- ----------->GT1       --------->ANAC58               --------->ATHB12                            <-- <---------ANAC55(2) ---------->DOF2      <---------ZAT14                                   <-------- --ANAC46  <---------GLK1(2)              --------->REM1(2)                                --------->AHL20(2) --ZAT6 --------->YAB1 --------->ANAC58--------->ALFIN1        ----------->GT1             <---------AHL20(2)   aacccgtgaatcagatttttggacaaagcaagccaagaagggtgtgaagagagacatgtttggagttgtaaaacttaagtgcgaggttttctattaattt  7493400  Previous    Next  AGI:  At4g12730.1    Description:  FLA2. Identical to Fasciclin-like arabinogalactan protein 2 precursor (FLA2) [Arabidopsis Thaliana] (GB:Q9SU13;GB:Q8L9T2;GB:Q9C5Q6); similar to FLA1 [Arabidopsis thaliana] (TAIR:AT5G55730.1); similar to fasciclin-like arabinogalactan protein 19 [Gossypium hirsutum] (GB:ABV27490.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 7491380    to: 7492873    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g12731.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G12735.1) Range:  from: 7493175    to: 7493357    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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