Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ANAC58       <---------ANAC58                                                --------->ARR11(3)       <---------ANAC58                                                <-----------ARR10 ------>YAB1                                                           <---------ARR11(3) ---------GT1                          --------->At4g35610  <-------TEIL    --------->ANAC46 --->YAB1                              <---------At4g35610 --------->CCA1(2)--------->ANAC58   ------   taacaacttgcctatcaaacaaatcaaatcgaaatcgaatcagctaaacaaaaactcatagatacagacttaaaatctacgcatagagaatacaatccag  7452800                             ------->GAMYB               --------->ANAC58      --------->ARR11(3)                            --------->MYB46(3)    <---------ANAC46             <---------ARR11(3)     <------ZmHOX2a(1)      <XXXXXXXXXXXXXXXXXXXXMIR869.2--------->ANAC58 ---------->DOF2  <------ZmHOX2a(1)       <-----------GT1  <------ZmHOX2a(1)          <----------ID1                - --->LBD16             <----------DOF2  <-----------RAV1(2)      --------->TOE1(3)       --------->MYB52(1)   agaaggaggaagaagactcacccttctttaaccatcttagcatcaggagttggagtagaacgcataagcttagagacaaagtatctcaaaataccgatta  7452900                                                                 --------->LBD16                                                                 ------>NtERF2                                                                --------->ANAC58                                                                --------->ANAC46                                                               <---------LBD16                                                              ------>ZmHOX2a(1)                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          --------->ARR11(3)                                                          <---------GLK1(2)                                                          --------->AGP1                                                        ----------->ARR10                                                 --------->HSFB2a(2)                                                 <---------HSFB2a(2)                                              <---------ARR14(2)--------->DEAR3(1)                           --------->ANAC58   --------->ARR14(2)--------->ANAC58           <---------        <---------LBD16    --------->ANAC58 <---------SPL7<---------ARR14(2)        <-----------GT1    <---------ICU4    --------->YAB1    ------>ZmHOX2a(2) --------->ARR14(2) --------->TOE2(3)    --------->ZAT6<------ZmHOX2a(1)     =============================HOX2a_HOX2a   <---------ICU4 -------->MYB46(3)=============================HOX2a_HOX2a<---------ARR11(3) --------->TOE1(3)   gaaccatcactacggagagaggaatcagaacccaatctctgatcgccgtatcgagaactagatcctccgccattctaaaccctaattatctctctttctc  7453000                                                                                               <-----                                                                                            ---------                                                     <---------YAB1                  *TSS  <---------AHL20(2)                                                  --------->GLK1(2)        <---------MYB52(1)  <-----                           --------->ANAC58      <---------GLK1(2)    --------->GLK1(2)    --------->AHL20(2)                           --------->ANAC58 ------>ZmHOX2a(2)         --------->ARR14(2)  --------->ICU4                        <---------REM1(1)  <------ZmHOX2a(2)          <---------ARR14(2)  <---------AHL20(2)               ------>ZmHOX2a(2)          <---------ARR11(3)   <---------At4g35610  <---------ZAT6             --------->ARR11(3)           <---------ARR14(2)   --------->At4g35610<---------ANAC46  < -DOF2       <---------ARR11(3)           --------->ARR14(2)   --------->ZAT2--------->AHL20(2)------   gtcttcttcgtcttcgatcttctctggtgaagcaaacaaaacacgatctgagattctgagagaagagctgagaatccgataatttagtggaaattatttt  7453100         <---------AHL20(2)         --------->AHL20(2)     <---------AHL20(2)     ----------->RAV1(2)                       --------->TOE1(3)    <---------AHL20(2)   <---------HSFB2a(1)                    ----------->TBP ----AHL20(2)    <---------ARR11(3)                         <---------DAG2 >AHL20(1)       --------->ARR11(3)                         <----------DOF2 ----AHL20(1)   --------->CCA1(1)                    --------->ALFIN1 --------->TOE2(3) ---------AHL20(2)       --------->HSFB2a(1)  <----------DOF2 ----------->TBP --->AHL20(2)   --------->RVE1(1)<-----------HVH21  --------------->AtSPL8     <---------MYB52(1)  *TSS   attttttttatttaaaaaatatctgaaaccttctgagtcagagagaggctttgatgtgttccctttataaaaccctaattcgtttgtctattaaacccaa  7453200                         <---------ALFIN1                                                      ------              --------------------->WRI1                                                     <<<<<<<<            -------->P  ------>ZmHOX2a(1)                                                  --------->MYB52(1)          <---------MYB111(2)                                           <---------ANAC46  -----------         --------->STY1(2)                  --------->ZAT14       --------->ARR11(3)      -----------         --------->ZAT2 ----------->HVH21  --------->LBD16        <---------ARR11(3)    --------->At4g35610         <---------STY1(2)        <----------DOF2             ---------->DOF2      >>>>>>>>>TBF1   actaaaaccctagctaccttgttctcctcaccgcttctttcttccctgaactcagaacttagaacaaagaactctcgtagacgaagaagaagatgacggt  7453300                                <---------GLK1(2)                            --------->At4g35610                            <---------ZAT2                    <---------ARR14(2)                    --------->ARR14(2)                 <---------ANAC46                 <---------ANAC58      <---------ZAT18      --------->MYB52(2)                ------>ZmHOX2a(2)      <---------ZAT14    --------->DOF5.7(2)               <---------ARR11(3)      --------->ZAT18    <---------MYB52(1)                --------->ARR11(3)  <------ZmHOX2a(1)<---------CCA1(2)                 --------->GLK1(2) --->At5g28300   <---------ANAC58                   <---------GLK1(2)     --------->TOE1(2) <<AtTINY2   ---------->DOF2<---------At4g35610   <---------YAB1        --------->ANAC58         ---- >HVH21 ------->TEIL--------->GLK1(2)           <---------DOF5.7(2)     --------->ANAC58     -------- >TGA1--------->ZAT14   <-----------HVH21     --------->DOF5.7(2)       --------->ANAC46 ----------->GT1   agaaggagtgaaccctaaggcgtatccgttagctgattctcagttatcgataacgattcttgatcttgttcaacaagctacgaattacaaacagttaaag  7453400                     --------->ARR11(3)                     <---------ARR11(3)                   --------->ANAC58                 <---------YAB1                   --------->ANAC46           <-------TEIL                   --------->ANAC58   ------>ZmHOX2a(2)               -------->P            --------->GLK1(1)            --------->At4g35610      <------ZmHOX2a(2)      --------->At4g35610             <--------           ------->TEIL              <---------GLK1(1)      <---------ZAT2            <<<<<<<<<TBF1 ------>DOF2<---------At4g35610     <---------ARR11(3)      <---------At4g35610   --------->GLK1(2) -->DOF2<---------ATHB12            --------->ARR11(3)    <---------RAP2.6(2)    <---------GLK1(2)---   aaaggagctaatgaagctaccaagacattgaaccgtgggatctctgagttcattgttatggctgctgatactgagcctctcgagattcttcttcatcttc  7453500               <---------TOE1(3)               --------->DAG2                          ------->TEIL             --------->CCA1(2)                      <---------YAB1                               <--- -At4g35610 --------->ARR11(3)               <----------DOF2             <----------DOF2         ---- --->ZmHOX2a(1)<---------TOE2(3)          <-----------GT1--------->TOE2(3)                 <---------   ctcttcttgctgaagataaggtatttgaatttcttcttatcgtttcactttcttatgaatctcaattagtagtttctttggctcttgcaagttttactgg  7453600         <---------ARR11(3)         --------->ARR11(3)         <---------ARR14(2)                                                                         -         --------->ARR14(2)                                                                         <        <---------GLK1(1)                                                                           -        <---------CCA1(2)       --------->CCA1(2)                          <---------MYB46(3)      <-      <---------ANAC58     ---------->DOF2                                <---------YAB1           -- ------ARR14(2)       --------->YAB1                                      <---------WOX13(1)       <- ----->ARR14(2)      <---------YAB1     --------->ATHB12               <---------YAB1      <---------ICU4 --GT1<---------ANAC58----------->GT1 <----------DOF2            <---------TOE2(3)  <-------TEIL <---   attcacttgggtatcttcttcatatgataaaaagataagactttattggctattagactccagttttgagattgtgattgttgatgttcgtagtaatcac  7453700  Previous    Next  AGI:  At4g12590.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN72892.1); contains InterPro domain Protein of unknown function DUF850, transmembrane eukaryotic (InterPro:IPR008568) Range:  from: 7451001    to: 7453085    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g12600.1    Description:  ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein. similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT5G20160.1); similar to ribosomal protein L7Ae-like [Brassica rapa] (GB:ABL97959.1); contains InterPro domain Ribosomal protein L7Ae; (InterPro:IPR004037); contains InterPro domain High mobility group-like nuclear protein (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038) Range:  from: 7453199    to: 7454478    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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