Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    ------>NtERF2                                                                                  <---------RAP2.6(3)                                                                                  <-----------HVH21                                                                                 --------->ATERF1(2)                                                                            <---------ANAC58                                                                      --------->ZAT6    ------->GAMYB                                                         ---------->DOF2    <---------ANAC58    ---------->DOF2                               ----------->GT1    <---------ZAT14<---------WRKY12 ----->YAB1         <------ZmHOX2a(1)            ----------->GT1    <-----------GT1<------NtERF2  --- -----YAB1        <---------TOE2(3)         <---------YAB1     <----------DOF2   <---------ATERF1(2)-   catagaaaaagaaacccatttaggatttaagaagaaacaaaatgttcttataggttaaaaaaaggctttattacactgccttgccgtcaacaggcttctc  7449400                                                    --------->At5g28300              ----------->HVH21                    ----------->GT1            --------->CCA1(2)                      <----------DOF2                   --------->At4g35610           <---------ARR14(2)             --------->ANAC46                        --------->LBD16        <------NtERF2                   ------>ZmHOX2a(1)--------->YAB1         <---------LBD16 ------>ZmHOX2a(1)        <-----------GT1 <---------ALFIN1                 <----------DOF2         <- --->ZmHOX2a(1)    <---------At4g35610 --------->ANAC46  <-----------GT1 ------>ZmHOX2a(1)     <----- -------->TOE2(3)  <---------ZAT2<----------DOF2 --------->At4g35610 <-----------GT1 <---------At4g35610   ctccttagtcggagatttgacagccggtttaccatctttctcctccacaactgctgtaattacaactggtttctcctctttaaccggagctatctcggtt  7449500                                                                     <---------At4g35610                     <------MYB83                                    --------->At4g35610                     <------MYB46(1)                        --------->At4g35610              <---------------AGL15                        <---------MYB46(3)                      <-             <-----------------AGL3                  ------->GAMYB --------->YAB1             <------NtERF2      <-------TEIL  --------------->AtSPL8           --------->AtMYB61                        ------- ----------GT1--------------->AGL15                  ----------->RAV1(1)      ------->TEIL  <-------- ----MYB52(1)<-----------------AGL1<----------DOF2  --------->MYB46(3)   <---------AtLEC2   <--------   ttttcagtttcattctctacatttggtacttcttctcctttgatttcaacttcaaccacagtggctgaatcatctgcatgaacggttttcttaggcgtct  7449600  <-------GAMYB --------->MYB52(2)                                                              <----------DOF2 --------->MYB111(2)                                                           --------->At4g35610 --------->MYB55(2)                                                        ------->TEIL <---------MYB46(3)                                                 <-----------TGA1 ------GAMYB                           ----------->RAV1(2)         <---------ANAC58 -->ATERF1(1)                <---------ARR11(3)                    <---------ANAC58         --------- -ANAC58                     --------->ARR11(3)                <----------DOF2 <---------At4g35610  < -ANAC58                 <-----------GT1               --------->ATHB12 <---------YAB1    <------ZmHOX2a(2)   cggttgttgtcttctcttctgtgtttgatactatcttctcaacctgtgggaaaaaatcgattgagctttgcgtcatgaatcagcttttatagatcaaagc  7449700                          --------->At4g35610                <xxxxxxxxxxxxxxxxsmallRNA(i)                                *TSS <-------MYC3           <---------ARR11(3)                                         --------->ZAT6           --------->ARR11(3)                  <---------GLK1(2)      <-----------GT1            <--- ->DOF2    --------->GLK1(2)<----------DOF2---------->DOF2          <-----------GT1    <-----------RAV1(1) ---------MYB111(1)       <---------At4g35610--------->ICU4      <---------ZAT6  ------->MYC3   -----   taactactaacaaaatctacaaaaactgagctttcgaaaacaaactaaagattatcacatggagatagtattacactattccacatgttttgttgtctga  7449800                 <------------CBF               --------->AHL20(2)               <---------AHL20(2)                                                        --------->ZAT6              <---------AHL20(2)                                                       <-----------GT1              --------->AHL20(2)                                                    --------->YAB1        ----------->GT1                                                           <---------YAB1       ----------->GT1          <---------At4g35610                               <---------AHL20(2)     <--------P--------->AHL20(1)          ------------>CBF                       --------->AHL20(2)    --------->At5g28300        --------->MYB52(1)        --------->ARR11(3)      --------->TOE2(3)   ----------->GT1            <---------WRKY38(1)       <------ZmHOX2a(1)        --------->YAB1 ------------AtSPL3         <-----------HVH21         <---------TOE2(3)        --------->ICU4 ----->DOF2--------->AHL20(2) <---------WRKY12  --------->AHL20(2)          ------------>CBF      <--   aagtacggtaagttaaattaattgcacatatgtcaacggatttaagacaatgaaataaggattttgcagttttcgagtatcaatattaataacacttgaa  7449900                                         ------>MYB83                                         ------>MYB46(1)                                        --------->ANAC58                                        --------->ANAC58                                        --------->ANAC46                                       --------->MYB46(3)           --------->GLK1(2)          <------ZmHOX2a(2)         --------->ANAC46            >>>>>>>>>TBF1  ----------->GT1  <---------YAB1               --------->TOE2(3)             >>>>>>>>>TBF1  ---------->DOF2 --------DOF2---------->DOF2   --------->TOE1(3)     --------->GLK1(2)  <----------ID1   ctttacaattggatcaaaagaaatgaagaaatacctcaacaccagccatttggagactctgaagaagaagaatatggacaaaggaaaaaatggctgagtt  7450000                                           <--------ATHB1                                           --------->ATHB12                                --------->YAB1                                          <---------YAB1                  --------->AHL20(2)                                          --------->ICU4                ----------->GT1    --------->AHL20(2)                                          <---------ATHB12             --------->DAG2   --------->YAB1                                   --------->DAG2           --------->ALFIN1           <---------YAB1        <------ZmHOX2a(1)     <----------ID1                <---------AtMYB61         --------->AHL20(2) ---------->DOF2 <---------YAB1   ---------->DOF2   <---------AHL20(2)---------->DOF2 <---------AHL20(2)   tagaaaaggaggaatagttgtgagtgagtttagcgaaaaagcgaatgattgtatttatagaggtggtcttcaaaaagtaaattcaaattttaataaaaat  7450100                       <---------ANAC58                       <---------ANAC46                       <---------ANAC58                     <------MYB83         --------->ANAC58             ----------->GT1                     <------MYB46(1)      --------->ANAC58           ---------->DOF2       <---------ANAC46                  <---------ANAC58      <--------P           <---------TOE2(3)             ----------                  <---------ANAC58    --------->ANAC46      ---------->DOF2           --------->YAB1                 --------->ATHB12 <-----------GT1          <---------AHL20(2)        <---------YAB1              <------ZmHOX2a(1)<---------ICU4              --------->AHL20(2)    <---------DAG2------            <---------TOE2(3) --------->ICU4           --------------->AGL15     --------->TOE2(3)   tgttgaagaatattgaggatgcttggtgtgtcatatttacaggtaagaaaaacatcactaattaaagtttgtaaagtaaactaccttatgatggtgtaaa  7450200                                           ---------->ID1                                         <---------ANAC46       <---------MYB59                                   <---------TOE2(3)           --------->ANAC55(2)     <---------ICU4            <----------DOF2               <-----------GT1  --------->YAB1               --------->TOE2(3)         <---------DAG2       --------->ATHB12 <-------TEIL               --------->ARR11(3)           <----------DOF2     <---------YAB1 ->GT1                      <---------ARR11(3)        <-----------GT1        --------->ICU4 ---->DOF2                  --------->GLK1(2)     <---------AHL20(2)       --------->YAB1 -----------   agcttcataatgtttttgtcaattgacaaaaatctttaatgttttgtggtattttataactttttacctatttcatatgatgatttgtgaacatgttata  7450300  Previous    Next  AGI:  At4g12580.1    Description:  unknown protein Range:  from: 7449271    to: 7449776    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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