Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <--------HAHB4                           --------->YAB1                          --------->ICU4               --------->ATHB51                       ----------->GT1               -------->ATHB1                       ----------->GT1 ------AHL20(2)--------->ATHB12                    --------->DAG2 ---->AHL20(2)<---------YAB1  <---------ICU4     ---------->DOF2 ->GT1   <-------TEIL     <---------YAB1 --------->AHL20(2)                            --------->MYB52(1) -------------TaNAC69(2)  <---------ATHB12--------->AHL20(2)       ----------->GT1  --------->ANAC46   aaatagaacgattcgtattattgatgctatcattaagaccaaaataaaaaaaaaaggtgaaaaattagcaagtgataaactataaaacacaacgttttct  7445000                                             <---------AHL20(1)                                             --------->AHL20(2)                                             <---------AHL20(2)                      <---------HSFB2a(2) --------->AHL20(2)                      --------->HSFB2a(2) --------->YAB1                   <---------YAB1     --------->AHL20(2)                                        <----                <----------DOF2       <---------AHL20(2)                                       <-----                --------------->AGL15<---------AHL20(2)                                        <-----               <-----------------AGL3--------->AHL20(2)         --------->GLK1(1)             -------             <-----------GT1   <---------TOE2(3) <---------AHL20(2)                     <----------DOF2 ----------->GT1<---------------AGL15--------->AHL20(1)<------ZmHOX2a(1)                <---------DAG2   aaatggtaagaatataaactttttatagaaattaagaaatttaataaaaaatttataggaaataagaaatctacataagaacacagacaactttttggct  7445100                                                 --------->WOX13(1)                                                --------->AHL20(2)                                                <---------AHL20(2)                                             <---------ICU4                                      --------->HSFB2a(2)                                      <---------HSFB2a(2)  --------->CCA1(2)                                <---------ARR11(3)  --------->YAB1      --------->ICU4        --------->YAB1  --------->AHL20(2) ------DOF2           --------->AHL20(1)    --------->ICU4<---------ARR11(3)                    ----- ----ANAC58           <---------AHL20(1)    <---------AHL20(2)                          ---------->DOF2 ----ANAC58           <---------AHL20(2)    <---------ATHB51              <-----------GT1      ------ --->ID1              --------->AHL20(2)  --------->YAB1  --------->ARR11(1)   ---------->DOF2-------   tttttgtaatgtttttctaggtaataaatttcataatcttccaaaaataattaatcaaaagatttgactaggcgattaacccaaagcttcaaaagaaaaa  7445200                                                                                              <------                                                                                             <-------          ------>ZmHOX2a(1)                                                         <-----------GT1      <---------ARR11(3)                                                      <---------RVE1(1)      --------->ARR11(3)                                                      <---------CCA1(1)     --------->RVE1(1)                                                       <---------ARR11(3)  ----   --------->AHL20(2) <----------DOF2          --------->TOE2(3)   <---------AHL20(1)        -------- ------>GT1       ---------->ID1               --------->TOE1(3)   --------->AHL20(2)        <------- --->DAG2--------->TOE1(3)    <---------ARR14(2)                   <---------AHL20(2) --------->ZAT6 --->DOF2--------->TOE2(3)    --------->ARR14(2)               <---------YAB1--------->ARR11(3)  <---   gtaaaaaaaatccttaatttgtttctttatcggattcaacaatttgaaaccataaatgacatattctaattaattcagagatatttttacactaatttta  7445300                                        ----------->GT1                                        --------->ALFIN1                                        <---------ANAC46      --------->TOE2(3)     --------->AHL20(2)    <-------TEIL            <---------AHL20(1) ---AHL20(2)                --------->AHL20(1) --AHL20(2)                 <---------AHL20(2)       ------------>CBF ----->HSFB2a(2)        <---------AHL20(2)          <-----------GT1 ->AHL20(2)             --------->AHL20(2)     ----------->GT1 ----TBP               --------->AHL20(2) ----------->HVH21*TSS ------HSFB2a(2) --------->YAB1  ---------->DOF2--------->TOE2(3)                    <------ZmHOX2a(1)   tagaaattcattaatctaatcacaaattaataaaataaagaggtgtgaaacgtttaacaatggcatagagagcgagagagagagagaggaaaactgtgtt  7445400                                                                                                  ---                                                                                                 ----                   ------>ZmHOX2a(2)                                                             ----                   =================HOX2a_HOX2a                                        <---------MYB52(1)                 --------->ARR11(3)                                                   --------->At5g28300                 <---------ARR11(3)                                                   <-------GAMYB            --------->TOE1(3)                                                        ----------->GT1            --------->TOE1(2)                                                       <---------TOE1(3)            --------->TOE2(2)                                                    <---------MYB52(1)           --------->HSFB2a(1)                                                  <-------GAMYB   <----           <---------HSFB2a(1)                                           <---------ZAT14       <-----      --------->ANAC58                                 ------>ZmHOX2a(1) --------->ZAT14     <-------      --------->ANAC58                          ------>MYB83      <---------ALFIN1  <---------TOE2(3)      --------->ANAC46                     <-----------GT1------>ZmHOX2a(1)     <-----------HVH21----  <-----------RAV1(2)        ------>ZmHOX2a(1)  ------>MYB46(1)  ------>ZmHOX2a(1)  <---------ANAC46   aaacccagacgaaaccttcgatcttcttctcctctctcaatctcttcaccttccttcctccttcttcctcacctctatactccgttacggttaattttcc  7445500                                                                                                    -                                                                                                    -       <-----------RAV1(1)                                                                         <- --->NtERF2                ---------->DOF2                                                         -- ----->LBD16             --------->ANAC46                                                        ---- ----->ANAC46           <---------HSFB2a(2)                            ---------->ID1           <---- -----RAP2.6(2)         --------->HSFB2a(2)                      --------->GLK1(2)              ----- ----LBD16      --------->DAG2                                  --------->ARR14(2)           <-------TEIL ----GT1        <---------TOE2(3)            --------->CCA1(2)  <---------GLK1(2)           <-------- -->NtERF2      <---------TOE1(3)       ---------->DOF2       ----------->ARR10        --------->ANAC46   ggccatcgaatgttggataaggttttcgcgaaagccgatagagaaagatagagacagagagagagagattctcgtcgctaaatgactctaagccgttcat  7445600                                             <---------ANAC46                                             <---------ANAC58                                             <---------ANAC58                                          --------->ALFIN1                                        <---------ANAC46                                        --------->DEAR3(1)                                        <---------TGA1a                                        --------->O2                                        <---------O2   <---------------------WRI1           --------->TGA1a   <------NtERF2                      --------->LBD16  ------>NtERF2                       ------>NtERF2 ------->GAMYB               <------ZmHOX2a(2)                                                    <-- =================================================MYC_MYB                                        <--- ----------->HVH21          <---------ARR14(2)                                                  <---- --------->DEAR3(1)         --------->ARR11(3)                                                 <----- -------->DEAR3(2)          --------->ARR14(2)                                                 ------ -------->MYB46(3)          <---------ARR11(3)   <---------ARR14(2)                        <---------ANAC58 --------At4g35610       --------->MYB46(3)<---------MYB46(3) --------->ANAC58             <---------ANAC58 ------->At4g35610     --------->MYB52(1)--------->LBD16      --------->ANAC58             <---------ANAC46 ----->MYB46(3)     --------->TOE1(3)--------->ANAC46       --------->MYB52(1)           <---------TGA2(2) -----At4g35610    --------->ZAT6    --------->DEAR3(1)   <---------MYB52(2)         <---------YAB1<< ---->At4g35610 <---------ATHB12    <---------LBD16       --------->MYB46(3)       <---------At4g35610 -MYB52(1)  --------->MYB46(3)------>ZmHOX2a(2)  --------->ARR14(2)          <------ZmHOX2a(1)<------   cagccgacgattcaaccaataacgctaaccgatcttactccgccgtggctggaaccgataacaaacgaaaacgagacgaggactcttctgattacgtcgg  7445700                                                                                                  <--                                                                                                  ---                                                                                           --------->LBD16                                                                                         <---------LBD16                                                                   --------->MYB46(3)    ------>ZmHOX2a(2)                                                                  --------->At4g35610   --------->ARR14(1)                                                             <---------At4g35610        --------->CCA1(2)                                                             <------NtERF2              <------ZmHOX2a(2)                                                             --------->At4g35610       --------->ARR11(3)                                                            <---------ATERF1(1)        --------->ARR11(1)     ---------->DOF2                                       <---------DEAR3(1)          --------->AGP1  <---------ANAC46                                      <---------ANAC58               --------->ARR14(3) --------->At4g35610                         <------ZmHOX2a(2)    <---------At4g35610  <---------ARR14(3) <---------At4g35610                      --------->DEAR3(1)<---------DEAR3(2)         <---------ARR11(3) -----GAMYB                              <------NtERF2  <---------ANAC46               --------->ARR14(2) ------DEAR3(1)                         ------>NtERF2   <---------ANAC58              --------->GLK1(1) --NtERF2                              --------->ANAC46<------NtERF2------->GAMYB     <---------GLK1(1) ----RAP2.3(1)                --------->ANAC58       <---------RAP2.3(3)<----------DOF2<---------ARR14(2) >NtERF2                      --------->ANAC58--------->YAB1------>NtERF2 <---------AHL20(2)      --- <<<<<<<MYB2    --------->ARR11(3)     --------->DEAR3(1) --------->ATERF1(1)        ----------->ARR10 ---DEAR3(1)    <---------ARR11(3)     <---------DEAR3(1)<-----------HVH21--------->AHL20(2)      <--   cgttgctgaaagtctcgagatgttgaagaaacaagaaatcgacgccgatcatatggctgcgtcggctcaacagactttaatttcatggagatccggtgag  7445800          <---------CCA1(2)                         <---------ZAT18   --------->LBD16          <---------ZAT14         --------->ZAT18  <---------LBD16        <---------ANAC58      ------>ZmHOX2a(1)                          ----------- -------GLK1(1)          <---------ANAC58--------->HSFB2a(1)      <---------ARR11(3)  <---------HSFB2a(2) ------>ARR14(2)      <---------MYB52(1)<---------ARR14(2) <-------GAMYB     ======================== ------>GLK1(1)      --------->LBD16    --------->ARR14(2)----------->GT1    <------ZmHOX2a(1) -------ARR14(2)   <---------LBD16  <---------------------WRI1    --------->ARR11(3)  --------->HSFB2a(2)   aattcccggtctctatcttcttccggtgagtgttcttcgtcgaatcgtcctgagtcgactcggttacaaatctttgtgaggatgatgtctggaggtaaaa  7445900  Previous    Next  AGI:  At4g12570.1    Description:  UPL5 (UBIQUITIN PROTEIN LIGASE 5); ubiquitin-protein ligase. Identical to E3 ubiquitin-protein ligase UPL5 (UPL5) [Arabidopsis Thaliana] (GB:Q9SU29); similar to UPL1 (UBIQUITIN-PROTEIN LIGASE 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G55860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21126.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain HECT; (InterPro:IPR000569); contains InterPro domain C-type lectin; (InterPro:IPR001304) Range:  from: 7445359    to: 7449083    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version