Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  <--                                                                                                  ---                                                                                   --------->ANAC46                                                   ------>MYB46(1)         --------->ANAC58  --------                                                   ------>MYB83            --------->ANAC58<------NtERF2                                                --------->MYB46(3)        --------->WOX13(1) --------                                              <-----------GT1      --------->ARR11(3)     --------->LBD16           ---------->DOF2        --------->AHL20(2)<---------ATHB12--------->CCA1(2)     <---------RAP2.6(3)       --------->WOX13(1)  ----------->GT1<---------YAB1           <---------ARR11(3)   <---------LBD16    --------->YAB1       ---------->DOF2 --------->TOE2(3)       ----------->GT1--------->TOE1(2) ---   aaagaatattaatcaaagaaaaacatggaaagaaaatttaaaacattataaccaatcgaagagtggatagatatatcaagcacatacgaagccggaagga  7421300                                                                                   <---------ZAT14                                                                                   --------->ZAT14                                                                                  --------->ALFIN1                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                <---------DEAR3(2)                                                                                <---------ORA47(2)                                                                                <---------MYB46(3)                                                                                <---------DEAR4(2)                                                                               --------->ALFIN1 -------HSFC1(2)                                                               <---------DREB2C(2) -- -------HSFB2a(1)                               <---------TOE2(3)              <---------DEAR3(1)---- ------>HSFB2a(1)                               <---------TOE1(3)             --------->ZAT18   ----- ->ANAC58                                       <---------YAB1                <---------ABI4(1) <---- ->ANAC58<---------MYB52(2)          <---------ANAC46                   <----------DOF2         ----- ------>HSFC1(2)                   --------->CCA1(2)             <----------DOF2<---------ATERF1(1)<-   accttcttgccacaaacattgagaagaaggctgagagagacgggaacattaagattaatgcctaaaactttagcctttagggcggtgcagagacaagcgg  7421400        ========================HOX2a_HOX2a                                   ------>ZmHOX2a(2)        <------ZmHOX2a(2)                                                   --------->ARR14(2)       <---------ARR11(3)                                                   <---------ARR14(2)       --------->ARR11(3)                                                   --------->ARR14(3) ------->At4g35610                                                          <---------ARR14(3)     -- ----->ATERF1(1)                                              ------->GAMYB <---------ARR11(3)     -- ---->At4g35610                                             --------->At4g35610      <<<<<<<<<<<<<<<< --NtERF2                                        <---------AtMYB61          --------->ARR11(3)    --- ---->ATERF1(1)              --------->ZAT18  <-----------RAV1(1)         ----------->ARR10  <------- -----NtERF2             <------ZmHOX2a(1)<---------ZAT14  --------->MYB52(1)<------ZmHOX2a(2) <-----   cagcctcaagatcaactaaaccattgaggagcgaacaacaaggcttcactggtggtgttcccaactgaattttgagaagatccttgagaacattggcgca  7421500                                                                                      <-------MYC2                                                                                      <-------MYC3                                                                                   <---------ALFIN1                                                                                   ----------->RAV1(1)                                                                                 ------>NtERF2                                                                                 --------->ABI4(1)                                                                                --------->RAP2.6(2)                                                                                --------->DEAR3(1)                                                                                --------->DEAR4(1)                                                                                --------->DREB2C(2)                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                ------->GAMYB                                                                                --------->ANAC58                                                                               <------NtERF2 --------                                                                               --------->ATERF1(1)                                                                               --------->RAP2.3(1)                                                                               --------->MYB46(3)                                                                              ------>NtERF2 ---------                                    <---------ZAT18                           <---------ATERF1(1)                                  <---------MYB52(1)                         <---------ALFIN1<-------                               <---------LBD16                               --------->DEAR3(1)                              --------->MYB52(1)                            --------->ATERF1(1)                           --------->At4g35610                              <---------ABI4(2)--------     <---------ZAT2        <---------ZAT2                                   --------->MYB46(3)   ------>NtERF2           <---------HSFB2a(1)                              <---------MYB55(2)   ----  --------->DEAR3(1)       <---------At4g35610                             <---------At4g35610<------ ----->GAMYB               <------NtERF2                                   ------>NtERF2  <---------ANAC46 ------->ANAC46            --------->ZAT2                               --------->At4g35610 <-------- <LFY--------->ZAT2        <---------HSFC1(2)   <---------TOE2(2)       --------->ZAT14  <---------DEAR3(1) ------>MYB46(3)           --------->HSFB2a(1)  <---------TOE2(3)   <---------ARR14(2)------->MYC3 --ANAC46                  --------->HSFC1(2)   <---------TOE1(3)   --------->ARR14(2)------->MYC2 -- -NtERF2          <----------DOF2--------->LBD16<---------TOE1(2)--------->ALFIN1<-----------HVH21---   aacgccgagcttgagagtgtctttagggcagcttccggtggacttgggcttaggtttgggtttaggggtggaactgcagccaccgccacatgcggtggtt  7421600 ----------->GT1                                                                        <---------TOE2(3) --->GT1                                                                                <---------TOE1(3) >ALFIN1                                                                                --------->MYB59 --MYB46(3)                                                                       <---------------AGL15 ->MYB55(2)                                                                       --------------->AGL15 ------>DOF2                                                                     <-----------------AGL1 -GAMYB---------->DOF2                                                           ----------------->AGL3 -AtMYB61                                                                        <-----------------AG --------->GT1                 <----------ID1                                    <-----------------AGL3 ------>DAG2              <------ZmHOX2a(1)                                      <-----------------AGL2   aaagtgaaaaaaagaatgttgaatgtgaggaaaatgacaagagaggctgaaatttttgaagccatttctcaaaaaatcaaatttctattttaggtaagaa  7421700                                                                                               <-----                                                               <---------AHL20(1)          <---------AHL20(2)                                                               --------->AHL20(1)          --------->AHL20(2)                                                              <---------AHL20(2)          <---------MYB52(1)                                                            <-----------TBP              <-------GAMYB                                                           ------->TEIL                  --------->At5g28300                                                       ------->TEIL                 <------MYB46(1)<-                                  ----------->GT1    <---------SPL7                 <------MYB83-----      --------->CCA1(2)      ----------->GT1        --------->ALFIN1              <--------P   ------   <---------YAB1           --------->ALFIN1       <---------------AtSPL3         --------->ALFIN1 --   <---------TOE2(3)---------->DOF2*TSS            <---------------AtSPL8<----------DOF2----------->GT1   gttttaagatagaagtattgccaaaagagagtggtgaagataaatgaagagagggtgtacgtatatatattagggcttcaaggggttggacagttaatta  7421800                              <---------YAB1                            -------->ATHB1                                               <---------DAG2      <---------YAB1        --------->ATHB12                                             <----------DOF2      --------->ICU4        --------->ATHB51                                          <-----------GT1  <-----------HVH21         <---------ICU4                          <--------HAHB4  --------->CCA1(2) ----AHL20(2)               <--------HAHB4                         <---------YAB1  <---------ARR11(3) --------At4g35610         --------->ICU4                 <---------ARR14(2)       --------->ARR11(3) ----->DOF2      --------->ICU4          <---------AHL20(2) ------>ZmHOX2a(2)    <---------TOE2(3)  < --->AHL20(2) <---------AHL20(2)   ------------>CBF       --------->ARR14(2)----------->GT1         < ------->At4g35610         <---------YAB1--------->AHL20(2)<------ZmHOX2a(2)<---------MYB46(3) <-----   aagctgtcattactgtataattttgaagaattattagaccaatttatattttagtaagtggatccttgtattattaagtggttaagatatactttatttt  7421900                                                  <---------ZAT18                     --------->TOE2(3)        <---------MYB52(1)                    ----------->GT1      <-----------------AGL1     <----------DOF2           <---------YAB1             ----------->HVH21           ---------->ID1 ---------YAB1    ------>MYB83      --------->At4g35610     <---------MYB52(1) ---------AHL20(2)------>MYB46(1)   <---------At4g35610--------->YAB1          <----------DOF2 ----AHL20(2) ------->TEIL <---------ATHB12 <-----------RAV1(1)  <-----------GT1              -------   tttttattgcattatgaaccaaatgttaaatcatggatagatgaccctgttgggcagtcatcgtttttttctttttcaaaacttttattagtttagtagt  7422000                                                                                              <------                                                                                             ------>MYB46(1)                                                                   <---------AHL20(2)        ------>MYB83                                                                   <---------YAB1           ---------                                                                  <---------AHL20(1)    <-----------GT1                                                                  --------->AHL20(2)  --------->DOF5.7(2)                                                                  --------->AHL20(1) <----------DOF2                                                                 --------->YAB1      --------->TOE2(3)           <---------MYB52(1)                            ------>ZmHOX2a(1)           --------->TOE1(3)          --------->TOE2(3)---------->DOF2              <---------LBD16           <-----------GT1   < -->MYB111(1)--------->MYB52(2)                      <-----------GT1       ----------->GT1--------->MYB46(3)   tagaaagtttttcgttagtcatctatacaaaaagaagaaccaatacatgtttttttttcctggctaaatataatagatggtttttaactttaaccaatcc  7422100                          <---------AHL20(2)                        --------->AHL20(2)                        <---------AHL20(2)                      <---------AHL20(2)  <---------AHL20(2)  --------->AHL20(2)     <---------TOE2(3)      ------>MYB83        <---------ZAT6 ---ATHB12          <---------AHL20(2)      <-----------GT1         ------>MYB46(1) --------->ZAT14 >WOX13(1)          --------->AHL20(2)      --------->MYB52(1)    <---------MYB59   <---------ZAT14 ----------DOF2   --------->AHL20(2) ----------->GT1           <-----------GT1      --------->ZAT18   atcttttatttatgggccatatatatatatatatgaaaactgaaaataacgttttgatgtgaaatataccaaatatacttatttagtgcagagttaacat  7422200  Previous    Next  AGI:  At4g12520.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT4G12510.1); similar to retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93505.1); similar to hypothetical protein OsI_009422 [Oryza sativa (indica cultivar-group)] (GB:EAY88189.1); similar to arachidonic acid-induced DEA1 [Lycopersicon esculentum] (GB:AAS80139.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); conta Range:  from: 7421053    to: 7421735    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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