Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------------->AGL15                                                --------->WOX13(1)             --------->MYB52(1)                 --------->ANAC58                 --------->YAB1          --------->ANAC46                      <---------TOE2(3)               <---------YAB1          <---------ANAC55(2)                   --------->ANAC58               --------->AHL20(2)   --------->ANAC46      <------ZmHOX2a(1)   <---------ATHB12                 --------->YAB1 --HSFB2a(2)--------->ZAT14             --------->YAB1                       <---------YAB1 ->HSFB2a(2)<---------ZAT14             --------->TOE2(3)                  <---------ICU4           - -TOE2(1) --------->ANAC55(2)         --------->GLK1(2)      ---------->DOF2--------->TOE2(3)   <---- -TOE1(1) --------->ANAC55(1)        <---------GLK1(2)   --------->TOE2(3) --------->YAB1      ------   agtataagaaacacttaactgaaaataggagaattcaaagaatcttaatcaaggaaaaacatcaaaagataacttaaacattataatcaatcgaagggtg  7417400                  --------->ANAC46          --------->ANAC58          --------->ANAC58         --------->WOX13(1)   --------->CCA1(2)             <---------HSFC1(2)  <---------ARR11(3)             <---------HSFB2a(1)                               <---------YAB1  --------->ARR11(3)             --------->HSFC1(2)                                <---------TOE1(3) ---------->GT1   --------->ANAC58                                                 <---------TOE2(3) -----MYB46(3)    --------->ANAC58          <---------MYB52(2)          <---------ANAC46 --->ALFIN1    --------->TOE1(2) --------->HSFB2a(1)                  --------->CCA1(2)             <   gatagatatatcaagcacatacgaaaccagaaggaaccttcttgccacaaacattgagaagaaggctgagagagacgggaacattaagattaatgcctaa  7417500                  --------->ZAT14                  <---------ZAT14                 --------->ALFIN1                <------NtERF2                --------->ATERF1(1)               <---------ATERF1(1)               <---------DEAR3(2)          <------ZmHOX2a(2)               <---------ORA47(2)          ========================HOX2a_HOX2a               <---------DEAR4(2)         <---------ARR11(3)              --------->ALFIN1            --------->ARR11(3)              <---------DREB2C(2) <------NtERF2              <---------DEAR3(1)--------->ATERF1(1)                                              ----             <---------ABI4(1) <------NtERF2                                                   ------             --------->ZAT18   --------->At4g35610                                  <---------AtMYB61       <----------DOF2         --------->ATERF1(1)              --------->ZAT18  <-----------RAV1(1) ----------DOF2<---------MYB46(3) --------->At4g35610       <------ZmHOX2a(1)<---------ZAT14  -------   aactttagcctttagggcggtgcagagacaagcggcagcctcaagatcaactaaaccattgaggagcgaacaacaaggcttcactggtggtgttcccaac  7417600                                                                       <---------ZAT18                                                                     <---------MYB52(1)                                                                  <---------LBD16                                                                 --------->MYB52(1)             ------>ZmHOX2a(2)                                --------->At4g35610           --------->ARR14(3)           <---------ZAT2        <---------At4g35610           <---------ARR14(3)         ------>NtERF2           <---------ZAT2           <---------ARR14(2)        --------->DEAR3(1)       <------NtERF2           --------->ARR11(3)     --------->ANAC46            <---------HSFB2a(1)           --------->ARR14(2)     ------->GAMYB               <---------HSFC1(2)         ----------->ARR10  <---------ANAC46                  --------->ZAT2       <---------TOE1(2) --->GAMYB <---------ARR11(3)    --------->MYB46(3)           --------->HSFC1(2)   <---------TOE2(3) --->At4g35610      <<<<<<<<<<<<<<<<<LFY--------->ZAT2        --------->HSFB2a(1)  <---------TOE2(2) -->MYB52(1)<------ZmHOX2a(2) <------NtERF2          <----------DOF2--------->LBD16<---------TOE1(3)-   tgaattttgagaagatccttgagaacattggcgcaaacgccgagcttgagagtgtctttagggcagcttccggtggacttgggcttaggtttgggtttag  7417700                     <-------MYC3                     ------->MYC3                  ----------->RAV1(1)                  <---------ALFIN1                ------>NtERF2                <-----------HVH21               --------->RAP2.6(2)               --------->DEAR4(1)               --------->DREB2C(2)               --------->ANAC58               --------->DEAR3(1)               --------->ANAC46               --------->ANAC58               ------->GAMYB              --------->MYB46(3)              --------->ATERF1(1)              <------NtERF2 ----------->GT1              --------->RAP2.3(1)             <---------ATERF1(1)             ------>NtERF2 <---------AtMYB61            --------->DEAR3(1)            <---------ALFIN1--------->MYB55(2)           --------->MYB46(3)           <---------MYB55(2)           --------->ATERF1(1)  ---------->DOF2           <---------ABI4(2)<---------MYB46(3)          ------>NtERF2  <---------ANAC46          <---------At4g35610<-------GAMYB       --------->ZAT14  <---------DEAR3(1)---------->DOF2       --------->At4g35610 --------->ALFIN1   <---------ARR14(2)<-------MYC2   ----------->GT1   --------->ARR14(2)------->MYC2 ----------->GT1                 <----------ID1 -------->ALFIN1--------->ABI4(1)--------->DAG2              <------ZmHOX2a(1)   gggtggaactgcagccaccgccacatgcggtggttaaagtgaaaaaaagaatgttgaatgtgaggaaaatgacaagagaggctgaaatttttgaagccat  7417800                       <---------TOE1(3)                                                          <--                       --------->MYB59                                                            ---                       <---------TOE2(3)                                                         <---                 --------------->AGL15                                                         <-----                 <---------------AGL15                                                        -------                <-----------------AGL1                                                    ------->TEIL                <-----------------AG            <------------CBF     ----------->GT1    <---------SPL7                <-----------------AGL3   --------->CCA1(2)      ----------->GT1        --------->ALFIN1                ----------------->AGL3<---------TOE2(3)        --------->ALFIN1       <--------------                <-----------------AGL2<---------YAB1   ---------->DOF2                <--------------   ttctcaaaaaatcaaatttctattttaggtaagaagttttaagatagaagtattgccaaaagagagtggtgaagataaatgaagagagggtgtacgtata  7417900                                         --------->ICU4                              <---------AHL20(2)                          <---------AHL20(2)                     <---------YAB1                          --------->AHL20(2)                   -------->ATHB1                         <---------MYB52(1)                    <--------HAHB4                <------- -------AHL20(1)        <-------GAMYB<-----------HVH21         --------->ATHB51              <------- ------>AHL20(1)        --------->At5g28300                    --------->ATHB12              -------- ------AHL20(2)    <------MYB46(1)<---------At4g35610          <---------ICU4                <------- ------TBP         <------MYB83---------->DOF2      --------->ICU4                           -------- >TEIL           <--------P   --------->AHL20(2) <---------AHL20(2)       --------->AHL20(2)<-------- -AtSPL8         --------->ALFIN1 --------->At4g35610         <---------YAB1<---------AHL20(2)  <---- -AtSPL3<----------DOF2----------->GT1   <---------YAB1       --------->ICU4--------->AHL20(2) ------   tatattagggcttcaaggggttggacagttaattaaagctgtcattactgtataattttgaagaattattagacaaatttatattttagtaagtggatct  7418000   <--------HAHB4  <---------YAB1        <---------DAG2 --ARR11(3)             <----------DOF2 --ARR14(2)          <-----------GT1                                                 <---------ZAT18 ->ARR14(2)        --------->CCA1(2)                                             <---------MYB52(1) --AGP1           --------->ARR11(3)          <---------YAB1                <-----------------AGL1 ->ARR11(3)       <---------ARR11(3) <------------CBF                  --------->At4g35610 -CCA1(2)  ----------->GT1         <---------YAB1             <---------ATHB12 <-----------RAV1(1)  < ------DOF2<---------MYB46(3) <---------AHL20(2)        --------->TOE2(3)----------->HVH21     <----- >ZmHOX2a(2)    <---------TOE2(3)  <---------AHL20(2)  ----------->GT1 <---------At4g35610--------->YAB1   ttgtattattaagtggttaagatatactttatttttttttattgcattatgaaacaaatgttaaatcatggatagatgaccctgttgggcagtcatcgtt  7418100   <----------DOF2                                          <---------------AGL15                   - ---------->ID1                               <---------MYB52(1)                            ------>ZmHOX2a(1) -----------GT1                              --------->TOE2(3)---------->DOF2              <---------LBD16 ----MYB52(1) <----------DOF2--------->MYB111(1)--------->MYB52(2)                      <-----------GT1   tttttctttttcaaaacttttattagtttagtagttagaaagtttttcgttagtcatctatacaaaaagaagaaacaatacatgtttttttttcctggct  7418200                             <---------ATHB12                            ------>MYB46(1)                            ------>MYB83                           --------->WOX13(1)                <---------AHL20(2)          ----------->GT1--------->MYB46(3)                <---------AHL20(2)  <---------YAB1       <-----------GT1                     --------->AHL20(2)  <---------AHL20(2) --------->DOF5.7(2)                 --------->AHL20(2) --------->AHL20(1) <----------DOF2                      <---------AHL20(2)     <---------TOE2(3) <---------AHL20(1) --------->TOE2(3)                  --------->AHL20(2)      <-----------GT1 --------->AHL20(2) --------->TOE1(3)<---------AHL20(2)<---------AHL20(2)      --------->MYB52(1) -------->YAB1   <-----------GT1   <----------DOF2   --------->AHL20(2) ----------->GT1           <--   aaatataatagatggtttttaactttaaccaatccatcttttatttatgggccatatatatatatatatgaaaactgaaaataacgttttgatgtgaaat  7418300  Previous    Next  AGI:  At4g12510.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT4G12520.1); similar to retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93505.1); similar to hypothetical protein OsI_009422 [Oryza sativa (indica cultivar-group)] (GB:EAY88189.1); similar to arachidonic acid-induced DEA1 [Lycopersicon esculentum] (GB:AAS80139.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); conta Range:  from: 7417233    to: 7417800    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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