Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <-----------RAV1(1)                                                      <---------ICU4            <---------MYB46(3)                        <---------AHL20(2)              <----------DOF2           <---------AtMYB61                      <---------AHL20(2)        <---------ARR11(3)         <---------MYB46(3)                       --------->AHL20(2)        --------->ARR11(3)         --------->MYB55(2)                      <---------AHL20(2) ---------->ID1    <---------DAG2        <---------DEAR3(1)                  <----------DOF2    <----------DOF2     <-----------GT1        --------->ALFIN1                <---------ZAT18  <-----------GT1   <---------CCA1(2)        <---------AtMYB61              <---------ZAT6--------->AHL20(2)  <---------AHL20(2)    <---------At5g28300              <---------ANAC46<---------AHL20(2)  --------->AHL20(2)      <---   ttggttcacggtggtggttttatctccagacaattggtttagtgttctttatttatttattacctcttttgttgtttaaatctttttacttttgggtttc  7287400                                                                                                    <                                                                                     <---------HSFB2a(2)                                                                                     --------->HSFB2a(2)                                                        <---------ZAT14           <----------DOF2   <         <---------AtMYB61                     --------->ANAC58                   <---------DAG2    <   ------>ZmHOX2a(2)   <---------DAG2          --------->ANAC58          <---------ARR11(3)        -- -------DOF2           <----------DOF2       ---------->DOF2   ------->TEIL  <-----------GT1       <-   tttgatctgttttggtttctcttgactttttgtataagtttgtaagacaaagcaagagttctctgtatgtttcaagttattacacttttggaagaaaact  7287500    <------MYB46(1)    <---------ANAC46    <------MYB83   <------MYB83   <------MYB46(1)                                                            <---------AHL20(2) <--------P                                                                   --------->AHL20(2) -------GAMYB                                                                <---------AHL20(2) ---------ANAC58                   --------->AHL20(2)                     --------->AHL20(2)    <---- ---------ANAC58                  <---------YAB1     <----------DOF2      --------->ATHB51     <----- ------->MYB55(2)           <----------DOF2     <-----------GT1          <---------YAB1     <-------- --------MYB46(3) >>>>>>>>>>>>>>>>>LFY <-----------GT1                   --------->ICU4 <-----------GT1   ttggttgggttttgggattaaaccaatgtgctttctattatttacacattttgctcttttaaaatttagtcgctcattatttatttgtttttatctttta  7287600                           ------>MYB83                                                     <------ZmHOX2a(1)                           ------>MYB46(1)                                                <---------TOE1(3)                         <---------MYB59                                      --------------->AGL15                        ======================================================================MADS_MADS                        ----------------->AG                                 ----------------->AGL3                      <-----------GT1                                  --------------->AtSPL8 -------                   --------->YAB1                                <---------ANAC58         <---------TOE2(3)                ----------->GT1                                  <---------ANAC58   --------->DAG2 -----At5g28300--------->ZAT6                                    <---------ANAC46  ---------->DOF2 ------GT1   --------->MYB52(1)                               --------->ALFIN1<---------------AGL15 --DOF2      --------->YAB1---------->DOF2               <<<<<<<<<<<<<<<<<LFY----------------->AG  <-   ctgtattcaaaacaataacagtaataacctaatgcagtagaaatttgataattttctatgaacagtggtgtgttttgttccctaataaagttaaggaaga  7287700                                                                                                   --                                                                                                   <-                                                                                                 *TSS                                                                                               ------                                                                                          --------->GLK1(2) ----------->GT1                                                                          <---------ARR14(2) ---->GT1    ---------->DOF2                           ---------->ID1    <------------CBF --------->ARR14(2) -----------CBF                                ------------>CBF<----------DOF2           <---------GLK1(2)   aaattgtaacatttacaaagttcagggttataggtgttatattttgtatttcaattcgtcttcttctttgctccagattgaacttacatgagaatcgccg  7287800                       <---------ANAC55(2)                                       --------->LBD16                       --------->ANAC55(2)                                       ------>NtERF2                    <---------MYB52(1)                                          --------->LBD16                   <---------ANAC46                                             <---------LBD16                 <---------ANAC46                                              <---------LBD16               <---------ARR14(2)                                             =======================               <-----------HVH21                                             <------ZmHOX2a(2)           <---------LBD16                                                   ========================           ------>ZmHOX2a(2)                                                <---------ARR14(2)          <------ZmHOX2a(2)                                                 <---------ARR11(3)         --------->ARR14(2)                                     <---------MYB52(1)<------NtERF2         <---------ARR14(2)                                    --------->LBD16------>ZmHOX2a(2) ------->ZAT6  --------->ARR14(2)                    <---------ALFIN1       --------->ARR11(3)  <---- ----------------AGL3<--------P     --------->LBD16 <------NtERF2           --------->ARR14(2)  ----- --->DEAR3(1)--------->LBD16      <---------LBD16 --------->RAP2.3(3)   ---------->DOF2         <----   aactctaatcggatccgggtcgggtatgtaatgtaaaccgggttttttgaagcccccatcttctccgtcgattttaaagatcccggcgatgttttcaaga  7287900        --------->DAG2       ---------->DOF2    ------>ZmHOX2a(1) ---------->ID1                                                <----------DOF2 ==========HOX2a_HOX2a                               <---------TOE2(3)                          ----- ==========HOX2a_HOX2a                            --------->YAB1                                ----- -----ARR11(3)                                   <---------ATHB12                               <---- ---->ARR14(2)               --------->ANAC46    <XXXXXXXXXXXXXXXXXXXXMIR1886.2     --------->TOE2(3) -----ARR14(2)     <---------MYB59             --------->WOX13(1)   --------->ZAT6  --------->TOE1(3)   tttgtcctaaaaagttggagacctaaaacccaaaccacatctctcaattcaatcaaaggttttagctttagctctagctcgataaaccctaaacccaaaa  7288000                                                                      --------->ZAT2                                                                      <---------ZAT2                                                                     --------->ANAC58                                                                   ---------->DOF2                                                                  --------->WRKY18(1)                                                                 ------>NtERF2                                                                 <-----------HVH21                                                                --------->RAP2.3(2)                                                                --------->RAP2.3(3)                                                                --------->RAP2.6(2)                                                                --------->DEAR3(1)                                                                <---------ATERF1(2)                                                                --------->RRTF1(2)                                                               --------->RRTF1(1)                                                               --------->RAP2.3(1)                                                               --------->ERF1                                                               <------NtERF2                                                               --------->ATERF1(1)                                                              --------->ABI4(1)                                                             --------->RRTF1(3)                                                             --------->DEAR3(1)                                                             --------->RAP2.3(3)                                                             <---------DEAR3(1)                                                             --------->RAP2.3(2)                                                            --------->ERF1                                                            --------->DEAR4(2)                                                            --------->ORA47(2)                                                            <------NtERF2                                                            --------->RAP2.3(1)                                                            --------->RRTF1(1)                                                            --------->RAP2.6(1)                                                            --------->ATERF1(1)                     <---------HSFB2a(2)                   ------>NtERF2            <------MYB83 <----------ID1          --------->LBD16--------->RRTF1(3)            <---------ANAC58                     ------>NtERF2<---------ATERF1(1)  <------NtERF2            <---------ANAC58          ------>MYB83         <---------RAP2.3(1)    --------->DEAR3(1)            <---------ANAC46      --------->MYB52(1)       <---------RRTF1(1)  ------->GAMYB <-------            <------MYB46(1) <---------MYB52(2)  ------------------>SPL14      <------------AtMYB77           <---------AtMYB61--------->MYB46(3)  --------->ANAC46--------->ATERF1(2)------>NtERF2           --------->MYB111(2)   --------->AtMYB61         <---------ATERF1(1)<---------MYB55(2)           --------->MYB111(1)  --------->MYB46(3) <---------DAG2<---------RAP2.6(3)--------->O2           <---------MYB46(3)   <---------MYB55(2) <----------DOF2<---------MYB52(1)--------->bZIP60(2)           --------->MYB55(2) --------->ANAC46 <---------LBD16------>NtERF2   --------->MYB46(3)           --------->MYB46(2)------->GAMYB <----------DOF2--------->DEAR3(1)  --------->DEAR3(2) <---   --------->ALFIN1 ------>ZmHOX2a(2) ------>MYB46(1)     --------->ANAC46   --------->SPL7<---------  --------->REM1(2)<------ZmHOX2a(2)<---------ALFIN1<---------SPL7<------NtERF2--------->DEAR3(1)---- ---->GLK1(2)     <---------ARR14(2)<---------MYB111(2)   <---------DEAR3(1)<---------ARR14(2)<------ ---->ARR14(2)    --------->ARR11(3)--------->MYB46(3) --------->ANAC46     --------->ARR14(2)------- -----ARR14(2)    --------->ARR14(2)<---------MYB55(2)--------->SPL7 --------->ANAC58 <------NtERF2   tccgagtaggggtttggtgggatctagacaacaaaccaccagcctctttcccgccttacgacgccgccgtcaagctccgaaccgccgcgtcgtctttcgg  7288100            -------->HAHB4            <---------ICU4            --------->ATHB12             <---------At4g35610            --------->YAB1   <-----------TGA1           <---------ATHB12  <-----------HVH21           --------->ICU4 <-----------ARR10           <---------YAB1 --------->ARR14(2)   ---------->DOF2  <---------ARR14(2)<---------MYB52(1)                      --------->CCA1(2) --LBD16  <---------TOE2(3) --------->YAB1                    --------->HSFC1(1) ------ARR14(2)   <---------SPL7     <----------DOF2          <---------HSFB2a(2) -DOF2<---------At4g35610 <---------ARR14(2)<-------TEIL      --------->HSFB2a(2) ----->ARR14(2)  <---------ANAC58--------->ANAC46             <---------HSFC1(1) ---HSFB2a(2)    <---------ANAC46--------->ANAC58  <----------DOF2<---------ZAT14<------ZmHOX2a(1) -->HSFB2a(2)    <---------ANAC58--------->ANAC58----------------->AGL3 <------ZmHOX2a(1)   aaccgtgaagctaatgatggcgtatgcgaatcgtcacgcctttagctacgttcctttagaagttcgagaacagaggaaagataggaaattgctaaacaaa  7288200                                                                 --------->ZAT6                            --------->ARR14(2)                  <---------ZAT14        <---------ICU4                        ----------->RAV1(2)               --------->HSFB2a(1)          --------->ATHB12                        <---------LBD16              <---------LBD16 --------->MYB52(1)<--------HAHB4                       --------->MYB52(1)         ----------->HVH21<---------MYB52(2)  --------->YAB1                      --------->AtMYB61      <---------MYB46(3) --------->ZAT14       <---------ATHB12                     --------->MYB46(3)     --------->ALFIN1--------->GLK1(2)       <-----------GT1<-                     <---------MYB55(2) <---------ZAT14  ----------->ARR10          --------->WOX13(1)                   <-----------GT1      <---------LBD16--------->LBD16             --------->AHL20(2)              ----------->GT1------>NtERF2<---------ANAC46--------->GLK1(1)        <---------AHL20(2)        <---------TOE2(3) --------->LBD16<---------DEAR3(1)<---------GLK1(2)--------->GLK1(2)      --   ttagagaacaaaggtttagttaaaccaccggagccttacttctgcggtgtttgtgaccggagattctacactaacgagaagctaattaatcatttcaagc  7288300  Previous    Next  AGI:  At4g12230.1    Description:  esterase/lipase/thioesterase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO16978.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 7284513    to: 7287536    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g12240.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G52010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16979.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 7287797    to: 7289219    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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