Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <------MYB83             <------MYB46(1)       --------->ZAT18     <---------bZIP60(1)     --------->bZIP60(1)     <---------bZIP60(2)    <---------AtMYB61 <-----------HVH21 -------->ALFIN1                 <---------GLK1(2) -------ANAC58                   --------->ARR14(2) -------ANAC46                   <---------ARR14(2)                                              <--- -------ANAC55(1)       --------->LBD16 --------->ANAC58                                     <------- -------ANAC58        <---------LBD16   --------->ANAC58                                ------>ZmHOX2a(1) ---HVH21 <---------MYB52(1)   ----------->ARR10         --------->GLK1(2)              <---------At4g35610   gcgtgtgaggtcgctaggttttggaccggagactagattctcaagacagattgaacaagactctgtttccatcttcaaactcttcaattcctctgctttt  7281500                             <---------ANAC58                             <---------ANAC58                      <------------AtMYB77                          <---------GLK1(1)                   --------->ANAC58                          --------->GLK1(1)                   <---------ANAC55(2)                  <-                         --------->ARR11(3)                   --------->ANAC58                     <-                     ---------->DOF2                       <---------MYB52(1)              <---------                   ------>ZmHOX2a(1)         <---------DOF5.7(2) --------->MYB52(1)   ----------->GT1     ------>ZmHOX2a(1)   <---------ARR11(3)--------->DOF5.7(2)--------->ANAC55(2) --------->ALFIN1 <- ------>ZmHOX2a(1)--------->TOE1(3)      --------->bZIP60(1)<--------P----------->HVH21--------->At5g28300 --------GT1      --------->TOE2(3)     <---------TOE2(3) ----------->GT1        --------->At5g28300 ---DOF2       --------->ARR14(2)       <---------TOE1(3) --------->LBD16    <---------ALFIN1   <----   atccttcctagtagaactatcctcaaagatttcttgttgtttgacgttaccgagacagtccggtaagtaactgtgacgaccacggtgatggtaaaaccgt  7281600                                  ------>ZmHOX2a(2)                                 <---------GLK1(1)                                 --------->GLK1(1)                                 <------ZmHOX2a(2)                  <---------ANAC58                                <---------ARR11(3)                  <---------ANAC58                         --------->DEAR3(1)                        <------NtERF2                        <------NtERF2                             <---------MYB46(3)                       ------>NtERF2                             <---------RAP2.6(2)                      --------->ANAC46                        <---------ATHB12                      --------->RAP2.3(2)                 --------->MYB46(3)      <-------TEIL                      --------->RAP2.6(2)                --------->ANAC58         --------->SPL7         --------->TOE2(2)      --------->ARR11(3)   --------->ANAC58           <---------SPL7         --------->TOE2(3) <---------MYB52(1)        --------->ANAC46           --------->ARR14(2) --------ANAC58       --------->DEAR3(1)             --------->ANAC58           <---------ARR14(2) --------ANAC58      --------->MYB46(3)           <---------At4g35610      --------->GLK1(2) --GT1   --------->TOE1(2)<-------GAMYB           --------->At4g35610      <---------ARR14(2) --------ANAC46      --------->ERF1          <------MYB83--------->ANAC58  --------->ARR14(2)  ------ -----MYB52(1)       --------->RAP2.3(1)     <------MYB46(1)--------->MYB52(1)<---------------AtSPL8   ttcgtccaaaacctaagtcgatagccgccgttgagatctctgaggctaggtcatcacacaaccaatggtggctagcgaatcgggtacggagaagtgatcg  7281700                                                                          <------MYB83                                                                          <------MYB46(1)                                                                         <---------AtMYB61                                                                    <---------MYB46(3)                                                                   <---------ANAC46                                                                  <---------MYB52(1)                                                                  <---------LBD16                                                                <---------DEAR3(1)                                                               --------->DEAR3(2)                                                            --------->ZAT14                                                            --------->ZAT18                                                            --------->WRKY38(1)          <------MYB83                                                            --------->WRKY12        <---------MYB46(3)                                                         <---------ANAC46--------->MYB46(2)         -                                                        <------NtERF2    <---------MYB46(3)     -----     <---------ANAC58                                  --------->LBD16<---------ARR14(2) <------MYB46(1)     <---------ANAC58                                <---------LBD16------>NtERF2   --------->MYB55(2) --------->ALFIN1                         --------->ANAC58  <---------ZAT14      <---------MYB46(3) < <---------AtMYB61    <---------TOE2(3)   --------->ANAC58 --------->ALFIN1     ------>ZmHOX2a(2)   < >ZmHOX2a(2)  <<<<<<<ZML2<---------WOX13(1)        <---------ARR14(2)<------NtERF2 <---------MYB52(1)   gatgtggtcgtgactagaactactgagattgatagtgtcgagacaagatagagtagccggagtggaccggcgggtttggtgatcggttgtttggtttaca  7281800              <------MYB46(1)          --------->ARR14(2)          <---------ARR14(2)          <---------GLK1(2)      <-----------------AGL1  ------>ZmHOX2a(2) <---------GLK1(1) <------ZmHOX2a(2)                             ----------->HVH21               <---------REM1(1) --------->GLK1(1)                            <-------MYC3                   <------MYB83          <- -------->ARR11(3)                         <---------ANAC58                  <------MYB46(1)       <- ----->DOF2  --------->MYB59   <---------YAB1 ------->MYC3               --------->ATHB12          <- ---------ARR11(3)     ------>ZmHOX2a(2)   <---------ANAC58             <---------YAB1         <----- ---------AGP1<------MYB83   --------->YAB1<---------AtLEC2        <----------DOF2      --------->GLK1(1)   aagatctcttcagatttggtatcgatctcaacgatgactgagtttgcatgtgatggagaagagagtttcctttgaagattggtgaagcgaaattccactt  7281900 --------ANAC58 --------ANAC58       ---------->DOF2 --------ANAC46    --------->ANAC58                                                          <------ZmHOX2a(1) -----DOF2         --------->ANAC58          >>>>>>>>>TBF1    --------->YAB1       <------------CBF--   tgcgagaattcatgttttgaaacggaaagagaaacagagaagtagaagaagaagacttggcaaatcgtagtgactagcgagagcaaattgagagaggaga  7282000                                                                                                 ----                                                                                                -----                                                                                                -----                              --------->ARR14(2)                                                -----                              <---------ARR11(3)                                               ------                              <---------ARR14(2)                                              <------                    <---------ANAC58 --------->CCA1(2)                                        <------                    <---------ANAC46 <-----------GT1                      <-----------GT1     <------                    <---------ANAC58--------->ARR14(2)          <---------TOE2(3)             <------                    <---------ANAC55(2)                         <---------TOE1(3)             <------                    --------->ANAC55(2)--------->ANAC46         --------->MYB59              <-------               <---------ZAT6<------ZmHOX2a(1)            <---------RVE1(1)                  --------              <---------TOE2(3)     <---------ARR14(2)   --------->ARR11(3)                  <-------              <---------TOE1(3)  <-----------TBP         <---------ARR11(3)              <-----------HVH21          <----------DOF2   ----------->GT1          <-------TEIL     >>>>>>>ZML2  <-----------GT1 ------->GLK1(2)    <---------ANAC55(1)--------->ANAC55(2)<---------CCA1(1)   <----------DOF2--------   gaatttgtgaagctttagggttacgtagtgaggatatatatacgcgtcttcaacgttcagatattttaggttctagtttcctttttttctctgtcaccta  7282100      <----------DOF2 -------->CBF ---->MYB52(1) ->MYB46(1) ->MYB83 --->MYB55(1)                     <----------DOF2 ---MYB59                      <-----------GT1 ---MYB111(2)                  ---------->ID1 ---MYB111(1)                 <-----------GT1 ---MYB52(2)              <----------DOF2 ---MYB46(2)          <-----------GT1                                                  <---------ICU4 --At4g35610        --------->HSFC1(2)                                                --------->ICU4 ->At4g35610        --------->HSFB2a(1)          <-----------TBP                     --------->ANAC55(2) --ANAC55(2)        <---------HSFC1(2)<-----------GT1        --------->ATHB12        <---------ANAC55(2) ->ANAC55(2)        <---------HSFB2a(1)<-----------GT1  <---------ZAT6             <-----------GT1   acaatttcctttttttttaagaagtttccttttttcctttttaacagttttatttgtagagtttgatttgaaggggttttggttattacttattagttta  7282200                  <--------P             <------------CBF            <---------AHL20(2)            <---------ICU4            --------->ATHB12            -------->ATHB1            --------->ATHB51            -------->HAHB4                             --------->AHL20(2)           <---------ATHB51                            <---------AHL20(2)           <---------YAB1                             --------->AHL20(2)           --------->ICU4                 --------->AHL20(2)         --------->YAB1                   <---------AHL20(2)         <--------ATHB1                   <---------AHL20(1)         --------->ATHB51                 --------->AHL20(1)         <---------ICU4                  --------->AHL20(2)            <------ZmHOX2a(1)         <--------HAHB4                  <---------AHL20(2) <---------AHL20(2)        <---------ATHB51              --------->AHL20(2)   <---------AHL20(2)        --------->ICU4                <---------AHL20(2)   --------->AHL20(2)  <-----------GT1        <---------ATHB12       <------MYB83<---------AHL20(2)      ---------->DOF2    ------------>CBF           <------MYB46(1)        <---------AHL20(2)       <---------AHL20(2)   agacttagcaataattattggtaagtttttagtgggttcttaaattaatttgagaataaaattaaatgctaaaggatgtattaacttaagagggcctctt  7282300                                                   ----------->TCP11(1)                                                 --------->ALFIN1                          --------->AHL20(1)               -------->HAHB4                  --------->ALFIN1                            <---------AHL20(1)               --------->YAB1    <---------bZIP60(2)<---------PCF2                         <---------ARR11(3)              --------->ICU4     <---------REM1(1)--------->ZAT18                          --------->ARR11(3)       ----------->GT1   --------->CCA1(2)     <-----------RAV1(1)                        <---------CCA1(2)   atacaagaggcgaaaaatgatggtaagagacgatgatgtggcaaactatgtgtgggccatgggaaaatacaaacttcattctacgaagactaatatctta  7282400  Previous    Next  AGI:  At4g12210.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G05350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41053.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7281302    to: 7281913    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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