Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                        --------->LBD16                                          <---                                       <---------HSFB2a(2)                                      -----                  <<<<<<<ZML2          --------->HSFB2a(2)                                      <----        ------->GAMYB             --------->HSFC1(2)                      --------->YAB1        <----       --------->ANAC58           <---------HSFC1(2)                     <---------ATHB12       <----       --------->ANAC46           --------->At4g35610                ------>ZmHOX2a(2)          -----       --------->ANAC58           --------->HSFB2a(1)              --------->ARR11(3)           <----     --------->MYB52(1)           <---------HSFB2a(1)              <---------ARR11(3)           -----    --------->TOE1(2)           <---------GLK1(2)                <---------ATHB12               -----   actaatccaacgaaaccctagaacctagagaccagaagcttccagacaaaccctataacagagtctaatgatctaatcaaaaacccaatttcgaaaaatc  7260800                                                                                          --------->ARR14(2)               ----------->GT1                                                            --------->GLK1(2)            ---------->DOF2                                                              <---------GLK1(2) ----------->AGL15                                                                       <---------ARR14(2) ------------AGL15                                                                     --------->LBD16 ------------>AGL1                                                                    --------->HSFB2a(2) -------------AGL2                                                                    <---------HSFB2a(2) -------------AG                                                     ----------->RAV1(1) --------->ARR14(2) -------------AGL1                                                   ------>NtERF2 <---------ARR14(2) ------------>AGL2                                                   --------->LBD16<------ZmHOX2a(2) -------------AGL3        --------->At4g35610                       --------->ANAC46================= ------------>AGL3  ---------->DOF2                                <---------LBD16 --------->ARR14(2) ------------>AG----------->GT1 <----------DOF2        --------->GLK1(2)       <------ZmHOX2a(1)    <   caaaattggtaagagaaagggtaaaagaagctaactttctctggtgatttgtctgaaattcttgtactctccgccataagaggacgatccagaatcggag  7260900                     --------->ANAC46                                                 <------ZmHOX2a(1)         ----------->HVH21                                                       <---------HSFB2a(2)        --------->LBD16                                                        <-------TEIL  >>>>>>>>       <---------ANAC58                                                       --------->CCA1(2)       <---------ANAC55(2)                                                    --------->ARR14(1)       <---------ANAC58                                                      --------->ARR14(2)       <---------ANAC46                                                      <---------ARR14(2)       ----------->GT1                         ----------->GT1               --------->ARR11(1) ======HOX2a_HOX2a<---------DEAR3(1)         ---------->DOF2                 <---------GLK1(2)  >>>>> ------ZmHOX2a(1) --------->DEAR3(1)   ---------->DOF2                  --------->MYB52(1)>>>>>>>>>TBF1   aaggacatcgcgtgaaatcgtcgacgaaatgttttttgatggaaagggaaagtagaatcgaatatcaaaaaaaaaaacagattcgcgaggaagaagaaga  7261000                                    <---------ANAC58                                         <-------                        --------->ARR11(3)                                                   <-------                        --------->ARR14(2)                                                   --------                        <---------AGP1   ----------->TGA1                                 --------->HSFB2a(2)                       <---------CCA1(2) ----------->HVH21     ---------->DOF2            <---------HSFB2a(2)           --------->LBD16          <---------ANAC58         --------->DOF5.7(2)       <----------DOF2 >TBF1     <-------GAMYB<---------ARR14(2)               ------->GAMYB  XXXXXXXXXXXXXXXXXXXXXXX>MIR163 >>>>TBF1 <---------ANAC46------>ZmHOX2a(2) <---------ANAC46--------->TOE2(3)      ---------->ID1 <--   agaatgaaatttccgttgaaattgtggatctagggtttacttggtgacgaagacaacaacgacgttaaagagttgaagaaaacttggcgcttctagattt  7261100                ------>NtERF2              <------NtERF2              --------->ATERF1(1)              <---------At4g35610              --------->At4g35610             <---------DEAR3(2)       ------>ZmHOX2a(1)       --------->LBD16      <---------LBD16                                                     *TSS     ----------->RAV1(2)                                                 ---------->DOF2   --------->ARR14(2)                                            --------->O2   <---------ARR14(2)                                            <---------TGA1a   <---------MYB52(1)                                            <---------O2 <---------ANAC58                                                ===================bZIP_DOF <---------ANAC58                                                --------->TGA1a                    < --ARR11(3)  <---------RAP2.3(1)                                 <---------ANAC58                  -- --GLK1(2)<-----------HVH21                                      <---------ANAC55(1)            ----- ->ARR11(3) <---------DEAR3(1)                                   <---------ANAC58               <---- ---------GT1<---------ATERF1(1)                                 <---------ANAC46       <----------ID1   ttgccgttcctgggtcggctccagcgagcccatgagttttcaaactttgaatgagttgttttctcagacgtgtgttaaagtcaaaatatagggacgaatt  7261200         --------->YAB1        <---------YAB1       --------->AHL20(1)       <---------AHL20(2)       --------->TOE2(3)                                          --------->ANAC58       <---------AHL20(1) --------->ANAC46                                                 --------->ANAC46       --------->AHL20(2) --------->ANAC58                                               <-----------GT1      --------->YAB1      --------->ANAC58                                              --------->MYB46(3)     <---------YAB1       --------->YAB1                                  <---------ARR14(2)    --------->AHL20(2)    --------->ANAC55(1)                             --------->ARR14(2)  ------>MYB83  <---------AHL20(2)      --------->ANAC55(2)                             <---------GLK1(2)--------->ANAC58 --------->YAB1           <---------ANAC55(2)                             --------->ARR11(3)<-------- ---------AHL20(2)      --------->MYB52(1)                 --------->ANAC58           --------->YAB1 ------->AHL20(2)<---------At4g35610                       --------->ANAC58       --------->ZAT6 ---- ---->AHL20(2)   --------->At4g35610     <-----------GT1   --------->ANAC46   <----------DOF2 ------>MYB46(1) -----AHL20(2)<<<<<<<<<<WRKY63  --------->TOE1(3)    ---------->DOF2      <---------ARR11(3)---------   atataatattataatagtcaaatgacaaacgtaaccttgatattaactaattttgcaaagtaagccactatatcaagatactttacagtaatcacccaac  7261300  --------->AHL20(2)  <---------AHL20(2)                                      <---------AHL20(2) --------->AHL20(2)                                  --------->ICU4           --------->ANAC58 --------->YAB1         --------->ANAC58           ----------->GT1            --------->ANAC58 <---------AHL20(2)     --------->ANAC58     <----------DOF2                  --------->ANAC46 -MYB55(2)            <---------ALFIN1       --------->TOE2(3)           --------->ANAC58 ----->AHL20(2)      <------NtERF2     <-----------GT1  <---------YAB1   --------->ANAC58 >MYB46(3)    ---------->DOF2     <---------YAB1--------->YAB1         ---------->DOF2   taattaaaatttgaaatatagcccccaagtcaaactatgattcactactttaatagttattaaaacttataactaaagccaaggaacatcaagcttagaa  7261400                                                                                      --------->YAB1                                                                             --------->AHL20(2)                       <---------ANAC46                                 <---------AHL20(2)--------->GLK1(2)                       <---------ANAC58  <---------ARR11(3)            --------->YAB1<---------AHL20(2)           <---------MYB59               --------->ARR11(3)       ----------->GT1    --------->AHL20(2)           --------->TOE2(3)  --------->AtMYB61                  --------->DAG2     --------->AHL20(2)        <<<<<<<ZML2    <---------ANAC58 <---------CCA1(2)      ---------->DOF2   --------->AHL20(2)   tagaagcctagaacctaaatcgatttcgtagaccaaaactctaaatctttgtcaaactcgtaaacaaaaggtataaaaatcaaatatttaataatctaac  7261500                                                                        --------->DOF5.7(2)                                                                     <---------TOE2(3)                                                                 ------>MYB83                                                                 ------>MYB46(1)                                             --------->ARR14(2)<---------MYB46(2)                                             <---------GLK1(2) <---------MYB59   <-----------GT1                   --------->AHL20(2)        <---------ARR11(3)--------------->AGL15                --------->YAB1        --------->GLK1(1)        <---------------AGL15               <---------ATHB12       <---------GLK1(1)       ----------------->AGL1    --------->TOE2(3)           --------->MYB52(1)          <-----------GT1  <----------DOF2   ttataatctaaaaacaaatcataaaatataaacaaaactgaaatccagattttagaataagtttaccaaacaaggttaacttttatccgatttttctcaa  7261600            <----------DOF2         --------->ARR11(3)                                                        <---------WOX13(1)         <---------AHL20(1)                                                     <---------YAB1         <---------ARR11(3)         ------>MYB83<---------ANAC46          <---------DAG2        --------->CCA1(1)           ------>MYB46(1)                    <-----------GT1        --------->RVE1(1)          --------->WOX13(1)              <---------AHL20(2)  --------->CCA1(2)    --------->AHL20(2)            --------->AtMYB61                --------->AHL20(2) >>>>>>>>>GATA-1    <---------AHL20(2)      --------->YAB1<---------ATHB12  ----------->GT1<----------DOF2   atttgttttaatatctttctagtttctgaataaaaaccaatccaatagttttgtgtttacaaatgtgaattatataccttttttgatagataaacgagaa  7261700  Previous    Next  AGI:  At4g12120.1    Description:  SEC1B; protein transporter. Identical to Protein transport Sec1b (SEC1B) [Arabidopsis Thaliana] (GB:Q9SZ77); similar to SEC1A, protein transporter [Arabidopsis thaliana] (TAIR:AT1G02010.1); similar to KEU (KEULE), protein transporter [Arabidopsis thaliana] (TAIR:AT1G12360.1); similar to Probable protein transport Sec1a (GB:Q7XWP3); similar to unnamed protein product [Vitis vinifera] (GB:CAO68886.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24477.1); contains InterPro domain Sec1-like protein; (InterPro:IPR001619) Range:  from: 7256532    to: 7261174    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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