Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------WRKY18(1)                         --------->TOE2(3)                         --------->TOE1(3)                         --------------->AGL15                       <---------At5g28300                      <-----------GT1                  --------->ATHB51              --------->YAB1                  --------->AHL20(2)           --------->ICU4                  <---------ICU4               <---------YAB1                               <--------                  <---------AHL20(2) --------->REM1(1)                          <---------WRKY12                 --------->ICU4     <-------TEIL<---------ICU4                <-----------HVH21    --             <---------MYB52(1)  <---------STY1(2)         <---------YAB1   ------>ZmHOX2a(1)-------- ---DOF2    --------->TOE2(3)    --------->STY1(2)<---------YAB1    ------>ZmHOX2a(1)       <--------   aaaaaacatcgttcccttaattatttaccttgactagctacatcccttgatgatgactgctatgtttgtcctcgactcctcgtcaactattctaatgaat  7253600                                                                                <---------SPL7                                                                              --------------->AtSPL8                                                                              --------------->AtSPL3                                                                             <---------At5g28300                                  ----------->GT1                            -------->P  --------->GLK1(2)                                 <---------ZAT6         <---------ANAC46    <-----------GT1      ----                               <---------ANAC46       <---------ANAC46    <---------ANAC58      <----                      <---------AHL20(2)     --------->ZAT14              <---------ANAC58    <------ -YAB1             --------->AHL20(2)        <---------ZAT14          <---------ANAC58   <---------ARR11(3) -------->DOF2     <---------AHL20(1)      --------->ANAC46           <---------ANAC58   --------->ARR11(3) ->ATHB12          --------->AHL20(1)      --------->ANAC58       <---------ANAC58      --------->RVE1(1) -ATHB12           <---------ARR11(3)      --------->ANAC58       <---------ANAC58--------->SPL7-----   ggaaagaagtatttgagccaatattttaaaatttagtggaaaaacactcaactgttttgtgtgaaaatgcttgcttacttaccgtacaaaaaatctaaga  7253700                                                                        <---------AHL20(2)                                                                      --------->YAB1                                                                    --------->ICU4                                                               --------->ANAC46                                                              <-------MYC3                                                              ------->MYC3 ----->CCA1(2)                                                <-------MYC2 -----ARR11(3)                               --------->ARR11(3)--------->ANAC58      <---------AtLEC2 ---TOE2(3)                ---------->ID1    <---------ARR11(3)--------->ANAC58    <-----------GT1--- ---->ARR11(3)   ---------->DOF2           <---------YAB1     ------->MYC2--------->GLK1(2)<---------   tatatatagcaccaatttttaaagagtttgtttttttgtgatttcatgatatttatcaaatacacatgccataaataatctaatttttcatgtcttttta  7253800                                                ----------->RAV1(1)                                             --------->ANAC58                     <---------AHL20(2)                     <---------AtLEC2        --------->ANAC58                    <---------AHL20(2)           --------->STY1(2)                 --------->ANAC46                    --------->AHL20(2)           <---------STY1(2)                ------->MYC3                      <---------AHL20(2)        <---------ANAC58                    ------->MYC2                     --------->AHL20(2)  ---- ------>ZAT6       <-----------GT1          <-------MYC2              ---------->DOF2          ------ -DOF2  <---------ANAC58   <----------DOF2  <-------MYC3  <---------ZAT6     --------->ICU4 <--------   gcactagttggctagctaatttttcatgtcttttttatcaaatacacatgccacaaaatagtcttaactcaacaaagtatttattaatttcccaataaca  7253900                                                                                 ----------->HVH21                                                                                --------->LBD16                                                                               <---------ANAC46                                           ----------->GT1                     <---------ANAC55(2)                                          --------->DAG2                --------->AHL20(2) <---------AHL20(2)                             --------->AHL20(2)        <---------ARR11(3)      --------->ANAC55(2)===                            --------->AHL20(1)         --------->ARR11(3)     <---------LBD16     --- ----->ANAC46               <---------AHL20(1)        <---------CCA1(2) <---------AHL20(2)<---------AHL20(2) --->ZAT6                  --------->AHL20(2)    --------->ZAT6   --------->ANAC58        --------->AHL20(2) -ATHB12            ----------->GT1      ---------->DOF2          --------->ANAC58   ------------>CBF   caaaacatttgagaattgggaagagaaaaatatatatatcacaaaaagttaagactatatctagtggcacaaaataaaatcccgtgatgcaatttaatcc  7254000                                     --------->ANAC46                             --------->bZIP60(2)                             --------->ANAC58                             --------->ANAC58                             <---------O2                  --------->ATHB12<---------ZAT14                 <---------ATHB12 --------->ZAT14       --------->AHL20(2)    --------->O2       ----------->TBP       --------->TGA1a                                              -----------       <---------AHL20(2)  <---------ALFIN1*TSS                                          <-----------HVH21 ======================================bZIP_DOF                                         ------>ZmHOX2a(1) ------->DOF2  <---------ICU4<---------TGA1a          ------>NtERF2 <-----------GT1   ----------->RAV1(2)   caaagtaatataaatactaatcactggagccacgtcttcactccaaaaacattcgccaactatacacatataacaaaacaaaacactctcctgtgacttc  7254100                                                <-----------HVH21                                               --------->REM1(1)                                               --------->ANAC46                                          ------>ZmHOX2a(2)                                         --------->GLK1(1)                                        --------->AGP1                                        --------->ARR11(3)                                        ---                                        <---------ARR11(3)                                        ---                                        --------->ARR14(2)                                        ---                                        <---------AGP1                                           ----                                        <---------ARR14(2)                                     ------                                       <---------CCA1(2)                                       <-----                                <---------ARR11(3)                                            <------                                --------->ARR11(3)    --------->LBD16    <---------At5g28300  <------                                --------->GLK1(2)   <---------LBD16   --------->ANAC58   <---------ICU4                          --------->LBD16<------ZmHOX2a(2)            --------->ANAC58  --------->ICU4 >HVH21            ------>ZmHOX2a(2)   <---------At4g35610 --------->CCA1(2)            <---------YAB1   tcttctcttcttctctctcgatctcttccccaaaaatcttcagatctctacatcaccggagagacgagaaacactcaccgtgagaaaaccatgattcctt  7254200                                            --------->ANAC58                                            <---------O2                                            <---------TGA1a  <---------ZAT14                           --------->O2  --------->ZAT14                           --------->ANAC46                  --------->ANAC58 ------>ANAC46                              --------->TGA1a                   --------->ANAC58 ------>ANAC58                              --------->ANAC58                 ------>NtERF2 ------>ANAC58                              --------->ANAC55(2)           ------>NtERF2 ----->SPL7                                 --------->ANAC55(1)           --------->LBD16 >ZmHOX2a(1)                       --------->ARR14(2)                    --------->ANAC58 ----SPL7              --------->ZAT18    <---------ALFIN1               --------->ANAC58 ---ANAC58    --------->HSFC1(2)--------->ANAC58--------->HSFB2a(2)      --------->ANAC46 ---ANAC58    <---------HSFC1(2)--------->ANAC58<---------HSFB2a(2)     <---------LBD16        ------   acgctacagtcgaagaagcttcaatcgcactgggacgaaacctcacacgtctcgaaactctatggttcgattactccgccacgaagtccgattactatct  7254300                                                                             ------>ZmHOX2a(2)                                                                           --------->ARR14(2)  <-----------HVH21                                                        <---------ARR14(2) --->ZAT6                 ------>ZmHOX2a(1)  ------>ZmHOX2a(1)           ----------->ARR10   <-------   ctactgtcacaacattttgttcttgttcctcgtcttctctctcgttcctctccctctcgttttcgtcgaattggctcgatctgcttctggtttgtttaat  7254400                                                                ----------->TGA1                                                                ----------->HVH21                                                                --------->ICU4                                                             --------->TGA2(2)                                                            <-----------TGA1                                                            <-----------HVH21                                                            <---------RAP2.6(3)                                                           --------->O2                                                           <---------O2                 ----------->GT1                           --------->ANAC58                <---------TOE2(3)                          --------->TGA2(1)           <---------DEAR3(2)       --------->CCA1(2)                                   <---------TGA2(1)           <------MYB46(1)       <------ZmHOX2a(2)                                   --------->bZIP60(1)         <------MYB83      --------->AGP1                                       <---------bZIP60(1)         <---------MYB46(3)      <---------ARR14(2)                                   --------->ANAC58           <---------TOE1(2)      --------->ARR11(3)                                   --------->ANAC46          <---------MYB52(1)      <---------ARR11(3)     <----------DOF2               --------->bZIP60(2)      <-------GAMYB      --------->ARR14(2)<-----------GT1                   <-----------STF1         <---------MYB46(3) --AHL20(2)     <---------TOE1(3)<---------At4g35610  ---------->DOF2          ------>ZmHOX2a(1)   cggtataagatccagcctaaggttaattactctttatctgatatgttcaaatgttacaaagacgtcatgacgatgtttatcctcgtcgttggtccattgc  7254500  Previous    Next  AGI:  At4g12110.1    Description:  SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); catalytic. similar to SMO1-2 (STEROL C4-METHYL OXIDASE), catalytic [Arabidopsis thaliana] (TAIR:AT4G22756.1); similar to Os10g0545200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065206.1); similar to hypothetical protein OsI_033362 [Oryza sativa (indica cultivar-group)] (GB:EAY79403.1); contains InterPro domain Sterol desaturase; (InterPro:IPR006088) Range:  from: 7254043    to: 7256400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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