Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ANAC58                                                                                <------MYB46(1)                                                                                <------MYB83                                                                                <---------MYB46(3)                                                                               <---------AtMYB61                                                                              <---------MYB52(1)                                                                              <---------MYB55(1)                    ----------->GT1                                           <--------P                    --------->LBD16                                          <-------GAMYB                  <---------LBD16                                            <---------MYB52(1)             <----------DOF2                          ------>MYB83        <---------LBD16             --------->TOE2(3)                        ------>MYB46(1)  <-----------GT1      <--------          ------->TEIL                           <-----------GT1    ------>MYB83--------->MYB52(2)  <         <---------CCA1(2)--------->MYB52(1)   --------->AHL20(2) <---------MYB59    <---------ANAC46 -->HSFB2a(1)<---------------AGL15    --------->ICU4<---------MYB59 ------>MYB46(1)  <---------ANAC58   tccctcttcatgtatctttaaccggaaataacgaagagacattatcaaattaaaccgaactcggtgaaccaaattacccggttggtttcgagcaatgaac  7242500                                                                                     --------->MYB46(3)                                                                                    >>>>>>>>>>>>>>>>>LFY                                                                            --------->ANAC46                                                           --------->ALFIN1 ------->GAMYB                                                        --------->DAG2      --------->RAP2.6(2)                                                      ---------->DOF2       --------->DEAR3(1)                                                  <---------HSFB2a(2)    --------->ARR14(2)                           <---------ARR14(2)     --------->HSFB2a(2)    <---------ARR14(2)         <      ----------->GT1      --------->ARR14(2)   <---------REM1(1)        --------->MYB52(1) <-------- -ATHB12         <---------------AGL15       <-----------RAV1(1)   <----------ID1   ------->TEIL<---- ---------ATHB12 --------------->AGL15      <---------TOE2(3)<------NtERF2 --------->MYB46(3)   <----   aaatgaatgagtaaattgtctaatttgagtatttgacttacagtctaatgttgtagaaaaggtggggaagagacaaaaccgccatgaaccaatgtccggt  7242600           --------->ANAC58             --------->LBD16  --------->CCA1(2)                    <---------HSFB2a(2) --------->ARR11(3)                   <---------LBD16 ------ZmHOX2a(1)       ------>ZmHOX2a(1)<---------MYB52(1) -LBD16    --------->ANAC58         --------->GLK1(2)                 <-------TEIL ----P     --------->ANAC46       ------>MYB46(1)             <---------YAB1                    ----- -----MYB52(1)---------->DOF2     ------>MYB83       ----------->GT1 --------->CCA1(2)     <------ZmHOX2a(2)   taggatatagtataagcaaagaagtccttgtaaaccaaattccggtagaaccattcggtttattctgctagatacatcgtaagggtttatgcgatcgaac  7242700                   --------->At4g35610                   <---------At4g35610                   <---------ZAT2                   --------->ZAT2                   ----------->RAV1(2)     --------->ARR14(2)              <----------DOF2                 <-----------RAV1(2)  --------->ANAC58                  <-----------GT1             -               <-----------HVH21      --------->ANAC58               --------->AHL20(2)           ---  <---------ARR14(2)   --------->REM1(1)   <---------ARR14(2)        <---------ICU4               ---  --------->ARR14(2)  <-------TEIL   --------->DAG2                  <---------AHL20(2)          ---- ---->ZAT6 <---------ATHB12         ---------->DOF2                  --------->ATHB51          <-----   tctaaatctgccaaacatgtcagctgcatcaaaaacaaaaaagcaaatattcaagaaaattgctaagagaattatttctttctctatgaattggttttaa  7242800      --------------->AGL15      <---------------AGL15     <-----------------AG     <-----------------AGL3    --------->MYB59               --------->YAB1     <-----------------AGL2  <<<<<<<<<MYB98                 <---------YAB1         ---------->DOF2 -------->ANAC46       --------->YAB1                     --------->YAB1        --------->YAB1 ------>TOE2(3)       <---------YAB1                     --------->ICU4     <------ZmHOX2a(1) ---->GAMYB        --------->AHL20(2)                    <---------YAB1 <---------ANAC58 ----->MYB46(3)    --------->AHL20(1)                <---------TOE2(3)  <---------ANAC46          <-- ------GT1         <---------AHL20(2)               --------->MYB52(1)  <---------ANAC58 --------->ARR11(3)   ccacaaaactatattagggaattaattataagttagggcaaaaaacctgataaataacgatgattataagcgttgcgaggaataagaaagagataatcca  7242900                                 --------->LBD16                                 <------NtERF2                                 ------>NtERF2                                --------->DEAR3(1)                               --------->ATERF1(1)                              ------>NtERF2                    --------->LBD16                    --------->At4g35610                          ---------->ID1                     <                    <---------At4g35610                     <---------ANAC58                        <        ------>ZmHOX2a(2)     <---------At4g35610     ------>NtERF2                     <---------DEAR3(1)        ================HOX2a_HOX2a                 <---------LBD16       <---------ANAC46          <      <---------ARR14(2)      --------->LBD16------------>CBF<----------DOF2           <---------ORA47(1)      --------->ARR14(2)     --------->ANAC46<-------TEIL   <---------ANAC58           --------->SPL7 -------ATHB12   ------>ZmHOX2a(1)--------->bZIP60(2)--------->ANAC46    <---------TOE2(3)          -   atcgagtagatcgcccatcctccgctgtcttccgccgcgttacaacgttcaatctccgccttgctttgtctctctaacgtagaaatacggacggtgtttt  7243000              <------------CBF         --------->HSFB2a(2)                      --------->CCA1(2)         <---------HSFB2a(2)                     <---------ARR11(3)                            ------        <---------LBD16                          --------->AHL20(1)                          <-------  ---------->DOF2                                <---------AHL20(1)   --------->YAB1         -------- <---------WRKY12                           ------------>CBF         ----------->TBP         -------- <---------WRKY38(1)                       --------->ANAC46  <---------AHL20(2)              <------- <---------WRKY45                          --------->ANAC58 --------->AHL20(2)         <---------ALFIN1 <<<<<<<<<WRKY40               --------->YAB1   <-----------TBP   <---------YAB1  <-----------GT1 <<<<<<<<<WRKY18    <------MYB83           --------->ANAC55(2)   --------->AHL20(2) --------->ANAC46 <<<<<<<<<WRKY62    <------MYB46(1)        --------->ANAC58 <---------AHL20(2)  <---------AHL20(2) <- -------->WRKY18(1)<---------TOE1(2)       --------->ANAC55(1)  <---------ICU4 --------->YAB1<-------   tggtcaaagctctggaaattgtaggtatatttatcagaaaattatacgcaatatataagagattaatttttataaaaactattaaaaccccactggatct  7243100                                             <---------------AGL15                                             --------------->AGL15                                            ----------------->AGL3        --------->DAG2                      <-----------------AGL2 <------MYB83                             <-----------GT1 <------MYB46(1)                       <----------TaMYB80 ----------->GT1                      --------->ARR11(3) >ZmHOX2a(2)                         --------->YAB1        <---------LBD16                  --------- --AGP1---------->DOF2              <---------YAB1       --------->KAN4(2)        ------->TEIL ->ARR14(2)                       --------->YAB1  ---------->DOF2 ----------------------->TaNAC69(2) ->ARR11(3)                      --------->ICU4  <---------AHL20(2)     <----------DOF2     --------- --ARR11(3)                      <---------ARR14(2)      <---------ARR14(2)    --------->ANAC58 -------P                        --------->ARR14(2)      --------->ARR14(2)    --------->ANAC58 --ARR14(2)         <---------AHL20(2)<---------ARR11(3)<----------TaMYB80   <---------AtLEC2   ggttggataaaaagctacttatttattcatatgcaaatatgatattcccatttaaagcatattcggaagtttgactttggcatgaaactcttaatcttat  7243200                                                                     --------->ARR11(3)                                                                    --------->YAB1                  <---------YAB1                               <---------ATHB12                 <---------AHL20(1)                           ------>MYB46(1)               ---------                 --------->ARR11(3)                      <-----------GT1                   <---------WRKY45                 --------->AHL20(1)                    <---------MYB52(2)                  <---------WRKY38(1)               --------->ARR11(3)                     --------->ANAC58 <---------ANAC58    <---------WRKY12               --------->AHL20(1)                     --------->ANAC46 <---------ANAC58   --------->WRKY18(1)               <---------ARR11(3)                     --------->ANAC58 ------>ZmHOX2a(2)  <<<<<<<<<<WRKY62               <---------AHL20(1)                 --------->AtLEC2 <---------ATHB12       <<<<<<<<<<WRKY40   <---------YAB1<---------ARR11(3)       <---------ANAC58    ------>MYB83                <<<<<<<<<<WRKY18 >YAB1<---------WOX13(1)---------->ID1    <---------ANAC58   --------->WOX13(1)   <---------ANAC58 >TOE2(3)     --------->YAB1<----------DOF2<----------DOF2 --------->MYB46(3)     <---------ANAC58  <   ttgatatggttgacaaaaatatttttgtttctttacgatgaaatgcttttctatgcaagtaaccaatcaatgatcgtgcctattgcctattggtcaaaga  7243300                                                                                               <-----                                               --------->At4g35610                            <------                  --------->ANAC46         --------->ARR14(2)                     <---------ALFIN1 --    --------->ARR11(3)           ---------->DOF2                              --------->MYB46(3)----- ->DOF2           --------->ANAC58   ----------->GT1                   <---------LBD16<----------DOF2 -----------GT1   --------->ANAC58   <---------ZAT6              ----------------->AGL1       -------   aattactatctttcatccataagctacttatcagttaaagtgttaaatctgcagaaatagaatcgattcgaaattcggaaaccaccatctttttttttta  7243400  Previous    Next  AGI:  At4g12090.1    Description:  cornichon family protein. similar to cornichon family protein [Arabidopsis thaliana] (TAIR:AT1G12390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16964.1); contains InterPro domain Cornichon; (InterPro:IPR003377) Range:  from: 7242159    to: 7242918    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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