Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------AHL20(1)                                                                              <---------AHL20(2)                                                                             <---------AHL20(2)                                                                             <---------AHL20(1)                                                                             --------->AHL20(1)                                                                             --------->ARR11(3)                                                                    ---------->DOF2                                                                 --------->ANAC55(1)    <---------YAB1          <------ZmHOX2a(1)                                      --------->ANAC55(2)   <---------AHL20(2)        <---------TOE1(3)                                        --------->ANAC46 --------->AHL20(1)        <---------TOE2(3)                                        --------->ANAC58 <---------AHL20(2)  --------->AHL20(2)                                      --------->DAG2     --------->AHL20(2)  <---------AHL20(2)                                --------->AHL20(1)       <---------ARR11(3)  <---------------AGL15                             <---------AHL20(2)      --------->AHL20(2) <---------YAB1                                     --------->AHL20(2)----------->GT1  <---------AHL20(1) -------HAHB4                                  <---------YAB1    --------->ANAC58 --------->AHL20(2) -------YAB1  --------->DAG2         --------->AHL20(2)  ---------->DOF2--------->AHL20(2)    <------ ------>ICU4 ---------->DOF2 ----------->GT1 --------->YAB1      <---------ANAC55(2) <---------YAB1   attattaattaaggaaaaagtatttttcaactggagaaattgaatatttataaataaaataaagcacacgtaaagaaaatatattttattatttttaaga  7238800                  <----------DOF2          <---------WOX13(1)           --------->ANAC46             --------->AHL20(2)           --------->ANAC58             <---------AHL20(2)       --------->ANAC58                <---------AHL20(1)                                          <-       --------->ANAC58                <---------AHL20(2)       <---------AHL20(2)                 <-       --------->ANAC46            <---------AHL20(2)           --------->AHL20(2)                 <-     --------->CCA1(2)             --------->AHL20(2)         <----------DOF2                --------    --------->ARR14(2)  <----------DOF2--------->AHL20(1)   ------>MYB46(1)                  <-------    <---------ARR14(2)---------->ID1   --------->AHL20(2)   ------>MYB83      --------->ZAT14-------- ---TOE2(3)--------->ANAC58       --------->AHL20(2)       <---------ALFIN1   <---------ZAT14<-------   aaacaatatacgcaggccatctttgtctttcccaaaaaaaatttaattgaattttgtatacccactttaattttgtctactatactatttcttattttat  7238900          <---------AHL20(2)          --------->AHL20(2)       <---------AHL20(2)      --------->ICU4      --------->AHL20(2)  ------->TEIL                                                                           <---------ANAC58 --------YAB1                                   --------->ARR11(3)       <---------AHL20(2) --------ANAC46                            --------->ANAC58  ------>ZmHOX2a(1)--------->AHL20(2) --------ANAC55(2)                         --------->ANAC58 --------->TOE2(3) <---------AHL20(2) ->AHL20(1)                      <---------At4g35610  <---------ARR11(3)--------->AHL20(1)          < --AHL20(1)                      --------->At4g35610  <---------AHL20(1)--------->AHL20(2)          - ->AHL20(2)                --------->ARR14(2)   <---------ARR11(3)      <---------AHL20(2)--------->ZAT18 --AHL20(2)<---------ICU4  <---------ARR14(2)  --------->GLK1(1)  --------->YAB1         <---------ANAC58   tatgtatatttattaattccctcccatcggattccagctaaaaacacgaatatctatatattcctaaatgaaaatttaatataaatccagtgcgagctat  7239000                                    <---------ICU4                                    --------->ATHB51                      --------->GLK1(1)               <---------YAB1       -------->ATHB1          --------->ANAC46          --------->ATHB12          --------->ANAC58    ---------->ID1                                                        <          --------->ANAC58 <----------DOF2                                                      -----        <-----------GT1    <---------DAG2                                                      <-----     <---------ICU4   <---------GLK1(1)                                                      <-------     --------->YAB1  --------->ARR11(3)        ----------->GT1                              <--------  --------->YAB1 ---------->DOF2  <----------DOF2    --------->AHL20(2)             --------->AHL20(2) ---------AHL20(2)   <---------ARR11(3)      ---------->DOF2                  <-----------GT1-------- -------->AHL20(2)<---------TOE2(3)<---------YAB1    <---------AHL20(2)   <---------ARR11(3)---------   attaaaataatcacgctattaaagatttccttttcgcattattgtataaaagtaaaaaaatggacagacataaacaaatcttacaatataaaaaatcatt  7239100                --------->TOE2(3)     ----------->GT1   ---------->DOF2        --------->YAB1 ---------AHL20(2)    <---------AHL20(2) ---->AHL20(2)  <---------MYB59 ----YAB1    --------->CCA1(1)                                                   <---------AHL20(2) --ICU4      <-----------GT1                                                    --------->AHL20(2) -ATHB12     --------->RVE1(1)  <---------ARR11(3)                              <---------AHL20(2) ->YAB1  --------->AHL20(2)   ----------->GT1   <---------AHL20(2)    ---------->DOF2 >ICU4----------->GT1--------->AHL20(2)<-----------GT1  ------------>CBF  --------->YAB1           <-   atataaaaagataaaataccttatttaatgacaagataaataaaccattttttatttcttcaatctaattcacaaagcataaataaatctaatttccttc  7239200                                                                          --------->YAB1                                                               <---------AHL20(2)                                         --------->MYB46(3)  <---------AHL20(2)                                        ------>MYB83       <---------AHL20(2)                                        ------>MYB46(1)   <---------AHL20(2)                                   <-----------GT1        --------->AHL20(2)             *TSS               <---------ICU4            <---------ARR11(3)         ----------->RAV1(1)   ------>ZmHOX2a(1)          --------->ARR11(3)<---------AHL20(2)    ------>ZmHOX2a(1)         <---------MYB59             <---------AHL20(1)--------->AHL20(2)   <<<< ---------DOF2         <-----------GT1  -------->P        --------->AHL20(1)<---------ATHB51 <-------   actttcctctccaacattttcttattttccttcctaatttccaacctctgttcttagcaatatattttttctccaaaaataattctcagtttgattttct  7239300                                              ------>ZmHOX2a(1)                                              <----------DOF2                                             --------->TOE2(3)      <----------DOF2     <---------ARR11(3)          <-----------GT1                    --------->TOE2(3) <<<<<TBF1               ---------->ID1  <-----------GT1        <---------CCA1(2) ----GT1             <----------DOF2 <----------DOF2      <----------DOF2 --------->YAB1   tcttctagctcttaagtatatttctttgttgttatttatcttttaatcctttaatctcatctttgtttatctttaatcaaaacccaaaatttacatgggt  7239400                                                                                                    -                                                                                                    <                                                                                                    -                    <---------TOE2(3)                                                              --                  ---------->DOF2                                                    --------->GLK1(2)                  --------->MYB52(1)                                            --------->LBD16    <-        <---------HSFB2a(2)                                                   <---------LBD16     ---        --------->HSFB2a(2)                   ---------->DOF2                -------->P          ----     --------->GLK1(2)         <---------------AGL15                         --------->MYB52(1)<-----     --------->ARR11(3)       ----------------->AGL2                    <---------ANAC46 <-----------HVH21     <---------ARR11(3)   --------->YAB1---------->DOF2--------->MYB52(1)  <---------ZAT14<---------MYB52(1)   tcttgaaaatctagaagaaataaaggaaacataacaaaaatagaaagaaaaagaagctaatggtcttaaatatggagtctaccggagaagctgttagatc  7239500                                              <---------MYB52(1)                                             ------>NtERF2                                            --------->DEAR3(1)                                            --------->ATERF1(2)                                            <---------ATERF1(2)                                            --------->RRTF1(3)                                            --------->bZIP60(2)                                            --------->RAP2.3(3)                                            <---------bZIP60(1)                                            --------->RAP2.3(2)                                            --------->O2                                           --------->ERF1                                           --------->RRTF1(1)                                           <------NtERF2                                        <---------ABI4(2)                                        ------>NtERF2                                    ----------->HVH21                                   ------>ZmHOX2a(2)                                   --------->DEAR3(2)                                  <------ZmHOX2a(2)          --------->At4g35610       <---------DOF5.7(2)        --------->CCA1(2)      --------->O2     --------->DOF5.7(2)         <---------ARR14(2)--------->GLK1(1)     <---------MYB52(1)          --------->ARR14(2)<---------GLK1(1) --------->MYB52(1)              --------->AGP1   <---------GLK1(2)          --------->At4g35610 ------>GAMYB                  ----------->ARR10  --------->ARR14(2)  <------ZmHOX2a(2) ---------ALFIN1            <-------GAMYB <---------ATERF1(1)<---------At4g35610 -------->AtMYB61          <---------MYB46(3)<-----------HVH21       --------->ARR11(3)        ------ ------->MYB46(3)         --------->ALFIN1------>NtERF2  --------->ANAC46 ---------->DOF2    <------- --------MYB55(2)        <---------MYB52(1)--------->RAP2.3(1)   ==================================== ----->P --------->MYB46(3)--------->MYB55(2)<---------RAP2.6(3) ---------->DOF2       ------>MYB83 < ----->WOX13(1)       <---------At5g28300--------->ANAC46<---------O2<---------ARR11(3)------>MYB46(1) -ZmHOX2a(2)<---------DEAR3(1) --------->MYB59<------NtERF2 ------->TEIL  ===========================   aaccaccggtaacgacggtggtattacggtggttagatccgacgcgccgtcagatttccacgtagctcaaagatcagaaagctcaaaccaatctcccacc  7239600                                                  --------->At4g35610                                                  ------>NtERF2                                                  <---------At4g35610                                                 <---------DEAR3(1)                                                 --------->RAP2.3(2)                                                 --------->DEAR3(1)                                                --------->RAP2.3(1)                                               <---------ATERF1(1)                                               --------->LBD16                                               ------>NtERF2                                       <-                                              --------->ANAC46                                     <-                                              <---------ALFIN1                            <------NtERF2                <---------ALFIN1              --------->DEAR3(1)                          ------>NtERF2                --------->AtMYB61           ------>ZmHOX2a(1)                            --------->RAP2.6(2)               --------->MYB46(3)           <---------ATERF1(1)                         <---------DEAR3(1)        ------>ZmHOX2a(1)                  <---------ALFIN1                            --------->ATERF1(1) --->TGA1a     --------->ANAC46        --------->ZAT2                                 <---------ATERF1(1) --ALFIN1  ------>ZmHOX2a(1)           <---------ZAT2                                 ------>NtERF2-- ====bZIP_DOF--------->ANAC46          <---------At4g35610         ----------->HVH21  <---------SPL7 -----------HVH21                      --------->At4g35610         ----------->TGA1  <---------DEAR3(1) ====bZIP_DOF<---------ALFIN1      --------->ANAC46             <---------DEAR3(1)  --------->RAP2.6(3)   tctgtcactcctcctccaccacagccatcgtctcatcacacagctcctccgccgctgcaaatttcgacggtgacgactacgactacgacggccgcgatgg  7239700  Previous    Next  AGI:  At4g12080.1    Description:  DNA-binding family protein. similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63596.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 7239213    to: 7241488    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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