Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---             ------>MYB46(1)                                                                     <---           <---------MYB46(2)                                                                    ----           <---------MYB59                                                                       ----           --------->TOE2(3)                   <---------At4g35610                              <----          <---------ANAC55(2)                  --------->At4g35610                              <----          --------->ANAC55(2)         --------->ARR11(3)                                       <-----        <-----------GT1          --------->TOE1(2)                                         --------->ARR14(2)   ---------->DOF2    <---------WRKY18(1)  <---------MYB46(3)                              <---------ARR14(2) -----GLK1(2)------>MYB83        --------->TOE2(2)                                    --------->LBD16 -----ARR11(3)     <---------ANAC58  <------ZmHOX2a(1)                                ------>NtERF2 ---->ARR11(3)     <---------ANAC58<---------TOE2(2)       --------->At4g35610      <---------LBD16   ttttgcaaagttacctaatttccttgactacataacctaggatgttggatgctgaggcaagagcagccttccacgatgaaatttcttccggcgtaactcc  7201000                              --------->DEAR3(1)                             --------->ANAC58   ----------->GT1           <------NtERF2  --------->DAG2             --------->ANAC58 ---------->DOF2            <---------ATERF1(1) ------>LBD16              <---------ALFIN1              <---------SPL7              <------MYB83 ------HSFB2a(2)        --------->ANAC58                --------->TGA1a              <------MYB46(1) ----->LBD16            --------->ANAC46                <---------TGA1a          --------->ATHB12   < ----->HSFB2a(2)        --------->ANAC58                ===========================bZIP_DOF        <- -----ANAC46   <--------P <---------ABI4(2)         <---------HSFB2a(2)     --------->HSFB2a(2)  <--- -----LBD16  ----------->GT1------>NtERF2   ------>ZmHOX2a(1)               <---------HSFB2a(2)  <--- ----LBD16  <---------HSFB2a(2)--------->LBD16      --------->HSFB2a(2) <----------DOF2   --------->ZAT6   gggaaaagtcaattctggtaacttgaacggcaccgcaaaactattcctctgtttctcgacgtccgatttgtcaactttgtagaagattggtaccactagc  7201100                                      <---------HSFB2a(2)             ===================HOX2a_HOX2a     <---------At4g35610              --------->HSFB2a(2)   <--------P====================HOX2a_HOX2a  <---------ANAC58        ------>ZmHOX2a(2)  <---------ANAC58       <------ZmHOX2a(2)  <-------GAMYB         <---------ARR14(2)              <---------ARR14(2) --------->MYB52(2)     --------->ARR14(2)              --------->ARR14(2) <---------MYB46(3)     <-----------ARR10               --------->GLK1(2) --------->MYB55(2)     --------->ARR14(3)             <---------GLK1(2)           --------->ATHB12 <------MYB83------>ZmHOX2a(1)     --------->ZAT6 --------->AtLEC2                 <---------ICU4 <------MYB46(1)        <---------ARR14(3)        --------->ANAC58                <---------YAB1 ---------AtMYB61       --------->GLK1(2)         --------->ANAC46  <---------ANAC58 --------MYB52(1)       --------->ARR11(3)        --------->ANAC58  <---------ANAC46              --- --------RAV1(1)        <---------ARR11(3)      <---------ALFIN1    <---------ANAC58 <---------WOX13(1) ------MYB46(3)        <------ZmHOX2a(1)     --------->ANAC46<---------AtLEC2     --------->ICU4  <--   tgttggttgctgttcctacattcgaggatcttcactaactctcgaagacaccacgcagaatttgcatagttcgtggagaagacgatgattgcaatcttgg  7201200                                                     <------NtERF2                                                   <---------ETT(2)                    --------->ZAT18                <---------ANAC46                               ---                    --------->ZAT14             <-----------RAV1(1)                               ---  --------->HSFB2a(2)                 ----------->HVH21                                         <---- <-----------GT1    <---------ZAT14  --------->HSFB2a(2)                                <----------DOF2 ------>GLK1(1) --------->DAG2       <---------HSFB2a(2)                 ------>ZmHOX2a(1)      ----- -------GLK1(1)---------->DOF2       ------>ZmHOX2a(1)               --------->ARR14(2) <---------DAG2   atttctcgattctatcgaaaagcgcagtgagattgtctcctcgacggagtctgtcgtcgatgaatgagtcgattcctcttagacgaagtgctttttggag  7201300                     <-----------HVH21                <---------ANAC46                <---------ANAC58                <---------ANAC55(2)           <-----------RAV1(1)           <---------MYB46(3) --------->At4g35610     ----------->HVH21  ---------->DOF2 ------>WRKY38(1) --------->ALFIN1                        <---------At4g35610 -------->HVH21 --------->ANAC55(2)                       --------->ZAT2 -----At4g35610 <---------ANAC58----------->HVH21         <---------ZAT2   <---------YAB1 ---------->DOF2 ---->At4g35610 <---------ANAC55(1)                       --------->At4g35610          <----------ARF1   atgaccggtgaagttgttgcgtgtgtcaaagcctctgaaactgagaaacacatcgaactctgctgaagatggagaagatgattccatgggagaaaagctc  7201400                                                                      --------->ATHB12                                --------->ZAT2                        <---------ICU4                                --------->At4g35610       <------MYB83--------->ATHB51                                <---------At4g35610       <------MYB46(1)                                <---------ZAT2           <---------AtMYB61 <---------ANAC58                        <---------DOF5.7(2)              --------->MYB59   <---------ANAC58                       <---------WRKY38(1)             <---------ANAC46<------------CBF                       <---------WRKY12         <---------ANAC58     --------->ICU4 ------>ZmHOX2a(2)     <---------WRKY45         <---------ANAC58     <---------YAB1                -- ------------>CBF ---------->DOF2               <---------ANAC46   --------->YAB1         -----------   tgatccaatttgtccagttttaaagtcaacgatgagctgagaaaaacaaggcttgtggtttggtttctctcataattgcgagaccggacaaaaacaattt  7201500                          --------->ANAC58                     <---------------AtSPL8              --------->AHL20(2)              <---------AHL20(2)                   --------->MYB46(3)                      <---------            --------->ANAC55(2)         --------->ANAC58                                  --------->ATHB12            <---------ANAC55(2)         --------->ANAC46                                 <---------YAB1    --------->AHL20(2)    --------->ANAC58  --------->DAG2              --------->AHL20(2)<---------ICU4 ---------->CBF   --------->ATHB12      --------->ANAC58              ----------->GT1    --------->ICU4 ->CBF--------->AHL20(2)  ----------->GT1  ---------->DOF2          ---------->DOF2   <---------YAB1   atccaatataaaatacttaattagtggcacgaaaaaaaaaacacgaaaagtcaacaaatcgatatgtgagcaaagtaaatttgtgtttttgattattggg  7201600                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                               <-----                                                                                               ------                                                                       --------->WRKY38(1)    <------                                                                       ----------->HVH21      ------>NtERF2                                                    <------NtERF2      --------->WRKY12       <------                                         <------ZmHOX2a(1)            <---------MYB52(1)     --------                                       <---------TOE1(3)        <---------HSFB2a(1)         ---------                            <---------MYB46(3)    <---------ANAC46   <---------At4g35610    <--------                            --------->MYB52(2)    --------->ETT(1)   <-------GAMYB         --------->At4g35610                            ----------->GT1     <-----------HVH21   <---------ANAC46       <---------At4g35610                          <---------MYB52(1)------>ZmHOX2a(2) <---------ARR11(3)           <---------ATERF1(1)                ------>ZmHOX2a(1)      <---------TOE2(3)      --------->ARR11(3)   <-------TEIL------                ===================================HOX2a_HOX2a--------->ARR14(2)<---------ANAC58 ---- ---CBF        --------->TOE2(3)    <---------AHL20(2)        <---------ARR14(2)<---------ANAC58<----   gttttaaaagttttcttcctcattcttcgtttgttaattttaaggatcgatgtcggagaaggaagaacttccgttgacattgacgtccatcggagcggcc  7201700        --------->ICU4      ----------->GT1  ------>NtERF2                       ----------->HVH21 -------->LBD16                    <---------ANAC46 ------->DEAR3(1)                 <---------LBD16 ----NtERF2                     --------->ARR14(2) ----ABI4(2)                    <---------ARR14(2) --->ATERF1(1)                 <---------HSFB2a(1) ---ATERF1(1)                  --------->HSFC1(2) -----HVH21      <---------YAB1--------->HSFB2a(1) ->RAP2.6(2)     --------->At4g35610--------->LBD16                               --------->AtLEC2 >ATERF1(1)    --------->YAB1  <---------HSFC1(2)                         --------->LBD16 -RAP2.6(2)<---------YAB1     ----------->ARR10                      <---------WRKY18(1)        <---- --->MYB46(3) <---------YAB1  --------->HSFB2a(1)                   --------->WRKY38(1)        <----- -->NtERF2 --------->ICU4     <---------HSFB2a(1)                   --------->WRKY12    ---------->DOF2 -----ALFIN1--------->YAB1  <------ZmHOX2a(1)                    --------->ICU4<-------TEIL ---------   accgcgactagtgattatcatcagagagtaggaagttccggtgaagggattagtagctcgagtagtgatgttgacccgaggttcatgcagaatagcccca  7201800                                                 ----------->ARR10                                         ----------->RAV1(2)                                        ------>NtERF2                                      --------->DEAR3(2)           <---------YAB1                                   --------->ZAT14          <---------YAB1                                   <---------SPL7--------->MYB52(2)--------->ICU4         --------->GLK1(1)    <---------ZAT14    --------->MYB59--------->ICU4         <---------GLK1(1)    --------->ZAT18  <--------P--------->ARR14(2)       --------->ATHB12       --------->ZAT14  <---------MYB52(1)--------->YAB1       <---------ICU4  <------NtERF2 --------->SPL7    --------->LBD16 -----LBD16       --------->YAB1   <---------ZAT14    <---------ANAC46<---------WOX13(1)  <---------YAB1 ----ALFIN1      <---------ATHB12 --------->DEAR3(1) <---------LBD16--------->ATHB12    <------ZmHOX2a(1) >PCF2<---------YAB1 <---------DEAR3(1)--------->DEAR3(1)<---------ARR14(2) ----------->GT1--------->YAB1   cgggtttgatgatttcccaatcgtcgtcgatgtgcaccgtaccgcctgggttagttccggttatgaatgatgattgggatgtgaattgcaggatgataaa  7201900  Previous    Next  AGI:  At4g12010.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G19510.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPr Range:  from: 7197205    to: 7201387    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g12020.1    Description:  WRKY19 (WRKY DNA-binding protein 19); transcription factor. Identical to Probable WRKY transcription factor 19 (WRKY19) [Arabidopsis Thaliana] (GB:Q9SZ67); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G19500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterP Range:  from: 7201650    to: 7208760    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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