Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->At5g28300                                                                                     <---------DEAR3(1)                                                                                  ----------->HVH21                                                                                <---------O2                                                                                --------->TGA1a                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                                --------->O2                         --------->ANAC58                                --------->ARR11(3)                         --------->ANAC58                                <---------ARR11(3)                         --------->ANAC46                       ==========================bZIP_DOF                  <---------ALFIN1                           ----------->RAV1(2)<---------TGA1a               --------->ZAT18                        <<<<<<<<<ARR2      <---------GLK1(2)               <---------ZAT18                        <---------ATHB12   --------->ARR14(2)             <---------At4g35610         --------->YAB1--------->YAB1    <---------ARR14(2) ---->MYB46(3) --------->ZAT14      XXXXXXXXXXXXXXXXXXXX>MIR420 ---------->DOF2 ===================== >STF1     <-----------GT1  --------->MYB52(1)      --------->WOX13(1) ----------->ARR10 <---------MYB46(3)   caaaaaccaaaatttagcgcacacttcaagaaaccgagactaatcacaaaaaaacaatcaaaaccctgaagcgaagatactcacgagacggtggataaga  7189500                                                                           --------->ANAC58                            --------->ANAC58                               --------->ANAC58                         --------->At4g35610                         ------>MYB46(1)              ---------->DOF2                                        ------>MYB83            --------->MYB46(3)          ------->GAMYB               --------->MYB52(1)       --------->HSFB2a(2)  --------->ANAC46                       --------->TOE1(2)       <---------HSFB2a(2)  --------->ANAC58     ------>ZmHOX2a(1) --------->TOE2(2) --------->At4g35610  <---------At4g35610    <---------ALFIN1     <---------MYB52(2) <---------At4g35610  --------->At4g35610   <---------At4g35610   <---------MYB55(2) ========================bZIP_DOF    --------->MYB52(1)           --------->MYB46(3)             <---   ctgagcggtctcgaaccaaagttcagcagcacgagactccaacggcaactcctctcgagtgaaatcaaaccaacgagaagcatcaaactcatactccaaa  7189600                                              --------->TOE1(1)                                             <---------At4g35610                             --------                                             --------->At4g35610                             <-------                                      <---------ARR11(1)                                     <-------                                      <---------ARR11(3)                               <----------DOF2                                      <-----------ARR10                         <---------ARR11(1)                                      --------->ARR11(3)                        --------->ARR14(2)                                      <---------ARR14(2)                        --------->ARR11(3)                  >>>>>>>>>>>>>>>>>LFY--------->ARR14(2)                        <---------ARR14(2)      <-----------HVH21       <XXXXXXXXXXXXXXXXXXXXMIR854A-E                    <---------ARR11(3)<-- ------ATHB12   --------->MYB46(3)   <---------CCA1(2)                         <---------CCA1(2)>>>>>   tcaatttcagtcacttcaaacaccattgtctccatctccatatcttcatcggactctgtctctgtgtccgtctccatctccatatctctctttaaaatct  7189700                                                                --------->ANAC58         --------->At5g28300                      <-----------TGA1        ----------->GT1                           <-----------HVH21    --------->ZAT14                              --------->bZIP60(1)    <---------ZAT14                     <------MYB46(1)         --------->ANAC58    <---------REM1(2)                   <------MYB83         ------>MYB83  <---------ZAT14                      <---------MYB46(3)    ------>MYB46(1)  --------->ZAT14                     <---------ANAC46       -------->P ->ARR11(3)                           <--------P --------->ANAC46     --------->TOE2(3)        <----- ----ARR10                           <---------MYB52(1)     ----------->RAV1(1)                ------ --ARR11(3)                        <-----------RAV1(1)    --------->MYB46(3)<---------AHL20(2)<------ -------ALFIN1               <---------ARR14(2) <---------TOE2(3)     --------->TOE1(3)     --------- >>>>>>>>>>>>LFY             --------->ARR14(2)<-----------GT1  --------->ANAC46          <----------   ccactgtacacagtaacacagaaacagagagaattcactggtgggtttttaacgtcactcaccaacaagaaaccctaatttatgtgtgattttaacatca  7189800                                                                                                <----                                                                                                -----                                                                                            ---------                                                                                            <--------                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(1)                                                                                           <---------AHL20(2)                                                    <-----------HVH21                --------->At5g28300                                                    <-----------TGA1                ----------->GT1 ----ICU4                                          --------->ANAC46                <----------ID1 --->ATHB12 --------->ZAT14                        --------->ANAC58               --------->RAP2.6(3) ---YAB1    --------->ZAT18                        --------->ANAC58              --------->MYB52(1) >YAB1      <---------ZAT14>>>>>>>>>TBF1         <-----------GT1            ----------->RAV1(1)<----- -GT1  <---------YAB1<------ZmHOX2a(1)    ----------->GT1            *TSS  <----------ID1  --------->AHL20(2)   ttggatttgatgagtgaacagaaggagaagaagaattgcagagaaggaaataaacgtcactgttttttttctccagagcgacaaaacggcaaatttattt  7189900                                                     <---------ANAC58                                                     <---------O2                                                     <---------ANAC46                                                     <---------ANAC58                                                     --------->O2                                                     <---------bZIP60(2)      ------>ZmHOX2a(1)                              --------->TGA1a     --------->TOE2(3)  --------->ANAC58             <---------TGA1a     <---------------AGL15                         <---------TGA2(2)     --------------->AGL15                        ------>ZmHOX2a(1)    <-----------------AGL3                        ----------->HVH21    ----------------->AGL3                      ----------->RAV1(2)    ----------------->AGL2     --------->At5g28300----------->TGA1    ----------------->AG--------->ANAC46      <---------ARR14(2)    ----------------->AGL1  ------>NtERF2 --------->ZAT14   ---------->ID1       --------->ANAC58  --------->ZAT18  <-----------GT1     --------->MYB52(1)  <---------ZAT14                               --------->ATHB12 -----AHL20(2)     --------->ANAC46     --------->ZAT18                                <---------YAB1 ---->AHL20(2)  --------->MYB46(3)     <---------ANAC58                                <---------AHL20(2) >AHL20(2)    --------->ARR14(2)       <---------ANAC46                    <---------ATHB12      <--- -AHL20(2) --------->ANAC46<---------ALFIN1   --------->ARR14(2)       --------->MYB46(3)       <---- ----AHL20(2) <---------ARR14(2)       <---------ANAC58       <---------YAB1  ------->TEIL<---------WOX13(1)   attttttccttatacagaaccacaaaacgacaccgtaagaagcgtgcagttcctgacgtggattattatgtcaacaaatgaatttgaatttgattggact  7190000                                                                              ----------->GT1                                                                          --------->MYB52(1)                                                                        <---------SPL7                                                                       --------->TGA1a                                                                       --------->ANAC55(2)                                                                       <---------ANAC55(2)                                                                       --------->ANAC58                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                       <---------bZIP60(1)                                                                       <---------ANAC58                                                                       <---------TGA1a                                                   --------->LBD16     <---------O2                                                  <---------ANAC58     --------->O2                                                  <---------ANAC55(2)  --------->ANAC58                                                  --------->ANAC55(2)  ==============================bZIP_DOF                                                  --------->ANAC46     <---------TGA2(1)                                                  --------->HSFB2a(2)  --------->bZIP60(1)                                                  <---------ANAC58  ----------->TGA1              --------->YAB1                     <---------LBD16    ----------->HVH21         <-------TEIL                 --------->ALFIN1          <------ZmHOX2a(1)      ----------->GT1  <-----------HVH21       <-----------GT1<---------TOE2(2)     --------------->AtSPL8          <---------ZAT14          <---------TOE1(2)     <---------------AtSPL8          --------->ZAT14    <----------DOF2--------->TGA2(1)  <----------DOF2 ----GAMYB   <---------ATHB51        --------->REM1(2)  =========================bZIP_DOF<---------ANAC58 -----MYB46(3)<--------ATHB1        --------->ALFIN1<---------MYB52(1)----------->STF1   <---------ANAC58   gttgagaggggtacaataatacccctgtctgagacagagtgtaggggtttttccgtaactttcgcaggaagtgacgtaaggggtattttgtgctttcgat  7190100                                                             --------->At4g35610                                                          ------>MYB46(1)                                                          ------>MYB83                                                         ------------>AtMYB77                                                         --------->MYB52(1)                                                        <---------MYB55(2)                                                        --------->AtMYB61                <------NtERF2                           --------->MYB46(3)            <---------bZIP60(2)               ------>NtERF2                           <---------MYB52(2)             ----------->RAV1(2)               --------->LBD16                         --------->MYB46(3)     --------->ANAC55(2)               <---------MYB46(3)              --------->ARR14(2)             <---------ANAC55(2)              <---------DEAR3(1)               <---------ARR14(2)         <-----------HVH21     <<<<<              <---------ANAC46                 --------->GLK1(2) <---------ANAC58   <-----------GT1             <---------LBD16                  <---------GLK1(2)  <---------ANAC58  ----------->HVH21            <---------RAP2.3(1)           <-----------GT1----------->RAV1(1)<-----------GT1 <--------           <---------DEAR3(1)           <---------YAB1------>NtERF2    <---------MYB52(1)   <--------   gagactgaaattttcggcggggaatcgagggaattgtggattattttcgattctgccaccaacagttgcattcgtttgtcacgttttgacctggctttat  7190200                                                                                                 <---                                   <---------YAB1                                                <---                                <---------YAB1         <---------AHL20(2)                  <---------AHL20(2) <<<<GATA-1            <-----------GT1           ----------->GT1           <---------AHL20(2)   ----- -DAG2      <---------GLK1(1)<---------ATHB51    --------->YAB1    --------->WRKY45        --------->AHL20(2) --DOF2     --------->GLK1(1)--------->AHL20(2) <---------TOE2(3)<----------DOF2      <---------DAG2   ctatttttgctaagaaatctctattttacaaattattctaattttgtactatggtaataaatctagtctttgactatttgatttagaacctttttaattt  7190300                                                                  ----------->GT1          <---------ARR11(3)                                 <---------WOX13(1)          --------->ARR11(3)                               --------->ATHB12    <-----------GT1                 <-------MYC3          <---------YAB1                   --------->ANAC58 ---MYB83<---------CCA1(2)          ------->MYC3         ------->MYC3                      --------->ANAC58 ---MYB46(1)                   <-----------GT1           <-------MYC3               ---------->DOF2-- ---->MYB59                    <---------AHL20(2)      ------->TEIL     --------->YAB1   ---------->DOF2   ggtatttttctaaatcttgttggataagtttatttacatgtggataagaaaactatgcatgtgattgggagtaattagaagaaaatgaaaggaaagaaat  7190400  Previous    Next  AGI:  At4g11990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63610.1) Range:  from: 7186090    to: 7189869    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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