Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------YAB1                                 <---------YAB1                               -------->ATHB1                               -------->HAHB4                     <---------ATHB12                               <---------ICU4                   ------>MYB83                               --------->ATHB51       --------->YAB1                               <--------HAHB4       --------->AHL20(1)                               <---------AHL20(2)   --------->AHL20(2)                               --------->YAB1       <---------AHL20(1)                              <---------ATHB51      <---------AHL20(2)                 <-----------GT1                              --------->ICU4     --------->AHL20(2)       <---------ZAT14 ---AHL20(2)      ------>ZmHOX2a(1)<---------AHL20(2)<---------AHL20(2)   --------->ZAT18 -->AHL20(2)      <---------CCA1(2)<---------AHL20(1)<---------YAB1       --------->ZAT14 ---AHL20(1)  <-----------GT1 <---------YAB1     --------->YAB1 ------>MYB46(1)     <---------YAB1   ttttcaaagttttttttctcctatcttggttaattattatttttgtttctataatataataaaaccaaatgaattgtggactgagtattatacaacccct  7180000                                                                    <---------AHL20(2)                                                                   --------->ARR11(3)                                                                   <---------AHL20(1)                <---------WOX13(1)                          ---------->DOF2              --------->ATHB12                            --------->MYB46(3)             <-----------GT1             <---------YAB1                  <---------TOE2(3)     <---------ARR11(3)   <-----------GT1     <-----------GT1                   --------->ARR11(3)--------->ANAC58    --------------->AtSPL8  --------------->AtSPL8               <---------ARR11(3)--------->ANAC58    <---------------AtSPL8   tcaatatgtactattttgattggatagcttaaattttcaaagattttaagtttttaggcacccaaagtatatattttgtttagtacaaatttaacttctc  7180100                        --------->ANAC55(2)                  -------->HAHB4                        <---------ANAC55(2)                  <---------ICU4                        <------MYB46(1)                     --------->ICU4                        <------MYB83                        <---------ATHB12       ---------->DOF2                       --------->MYB59   ------>ZmHOX2a(2)  <---------ATHB51   <-----------HVH21                       --------->MYB111(1)              <---------MYB59       <---------O2             --------->DAG2         <---------WOX13(1)<---------PCF2          --------->ANAC46            ---------->DOF2    <------MYB83 <---------TOE1(2)--------->YAB1   --------->bZIP60(2)       <---------AHL20(2)      <------MYB46(1)      --------->ZAT18           --------->O2     <-----       --------->AHL20(2)     --------->MYB59      --------->ALFIN1       <------NtERF2        <-----   aactagtttttaaataaagtcatattaggtatttggtaattgatcgtatgtgagtgggcctaataatgaagtaggcctcgacgtcaaaagaaatttgaag  7180200                                            <-----------GT1                                         --------->ANAC46                                      <---------ZAT14                             ----------->RAV1(1)                              --------->AHL20(2)                    --------->ZAT6    <-------TEIL                     <-------GAMYB                  <-----------GT1     <---------ZAT18        --------->ARR14(2)           <----------DOF2  --------->AtMYB61    <----------DOF2 ------>ZmHOX2a(1)        <-----------GT1  --------->ANAC46--------->ANAC55(2) <---------ARR14(2) ----TOE1(3)   --------->ANAC55(2)    --------->ZAT14  ------->GAMYB------->TEIL   --------->ZAT6 ----TOE2(3)   <---------ANAC55(2) <---------MYB46(3) --------->MYB46(3)<---------MYB52(1)   gtagcccatttatctttacttaacaatacaccaccagcggttcacttaaccctttaacagccaaatcctgtaccgttagattatatcactaatcgcatct  7180300                                        <---------YAB1                              --------->ANAC46                              --------->ANAC55(1)                              <---------ANAC55(2)                              --------->ANAC58                              --------->ANAC55(2)                            <---------ALFIN1                           <---------REM1(2) <-----------HVH21                           ------>MYB83------>MYB83                           ------>MYB46(1)<------------CBF                                >>>>>>>>>TBF1                     ------>ZmHOX2a(1) -------->P                                   >>>>>>>>>TBF1                <----------DOF2    --------->ZAT6--------->At4g35610             >>>>>>>>>TBF1               <---------ICU4 --------->ANAC58   <---------At4g35610      --------->CCA1(2)          <-----------GT1  -------->P  ------>MYB46(1)                   <----------ID1>>>>>>>>>TBF1   tgtccgttcaattttcatctttcctcacctacacgtaaccctaccattgtcagagcccaagtccagagagagagagagacgaagaagaagaagaagaaac  7180400                                                                            <<<<<<<<<TBF1                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                   <---------ANAC46     <-----------GT1                               *TSS                <---------ANAC58   <---------HSFB2a(1)                             --------->MYB52(1)    <---------ANAC58   --------->HSFB2a(1)  --------->YAB1            --------->ZAT18     <----------DOF2     <---------GLK1(2)      <---------   aaaataagaatacaaaacacagagaagaagcgaacagagaaagattagggctttcttggatttttaaatagaattttcttcttcacttgtgttctttctc  7180500                                           <---------------AGL15                                           --------------->AGL15                                          <-----------------AGL1                                          <-----------------AGL3                             <---------HSFB2a(1)             <---------ZAT6                             --------->HSFB2a(1)         --------->ZAT14                             --------->HSFC1(2)          <---------ZAT14                 --------->At5g28300                   --------->YAB1  <---------MYB52(1)    --------->ZAT18             <---------ALFIN1                  <---------YAB1 --------->MYB52(2)    <---------------AtSPL3 <---------GLK1(2)<-----               <----------DOF2  <-------TEIL           --------->ZAT6         --------->ARR14(2)  <---------MYB52(1)         <---------HSFC1(2)     <--------P                <---------ARR14(2) -DOF2    ---------->DOF2   <---------TOE1(2)    <---------ZAT6     <-----------RAV1(1) ----------->GT1   attcgttatcccaaaagcttttgataatccaaggttcgtttttttcttctactggtaactgtactgttctatgttgttcatattctcacactgtaatttg  7180600                            <---------------AtSPL8                          <-----------RAV1(1)                     <------MYB83                                 <---------AHL20(2)                     <------MYB46(1)                              --------->AHL20(2)                  <---------MYB52(1)                             --------->AHL20(2)             <----  <---------MYB46(3)--------->MYB59               --------->CCA1(2)             <---------ARR11(3) <- ------RAV1(1)  <---------YAB1--------->ZAT18<------ZmHOX2a(1)   <---------AHL20(2)<----------DOF2 <-   ttggctgttcaatgggttctgtttggttatggggcacagtcaatagaggaagaaatgggtttcagaatttaatttgatactagttcttttgaattgttat  7180700                                                                                ----------->GT1                                                                           <------MYB83                      <---------LBD16                                      <---------ANAC46                     <---------ANAC46                                      <------MYB46(1)                <------MYB83                                               <---------ANAC55(2)                <------MYB46(1)                                           --------->MYB59 <---------DAG2        --------->GLK1(2)                        <------MYB46(1)          --------->MYB111(1) -----YAB1 <---------YAB1    >>>>>>>>>TBF1       <------MYB83             --------->MYB46(2) ---------DOF2 --------->MYB59                  --------->MYB59       --------->ATHB12    <----------DOF2 --------DAG2<---------MYB52(1)         ---------->DOF2              <---------YAB1    <-----------GT1   gctttatgacattctgtttggttatggggaagaagaaatagagaaagagttaggttttctactgaattgttttgattaggtgaagaaaattactttatgt  7180800                                                                                                 ----                                                                               <---------ZAT18<------                                                                               --------->ZAT18-------                                                                        <---------YAB1        -------                <---------ARR11(3)                   <---------AtLEC2 <---------ICU4         <-------        <---------YAB1        <---------ZAT6        <-------TEIL      --------->ATHB12       --------      --------->YAB1      <--------P            --------->MYB52(2)    --------->YAB1  <---------ATHB12  <---------YAB1--------->ARR11(3)    <----------DOF2<---------ANAC46<---------YAB1   --------->ICU4   catttcgattataaatagtatctctctggttagtgttgaactttcgaagttagtttcatggatactagtttatcattgtagtagactaatgagtaatgat  7180900  Previous    Next  AGI:  At4g11970.1    Description:  YT521-B-like family protein. similar to ATCPSF30/CPSF30, RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G30460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63632.1); contains InterPro domain YT521-B-like protein (InterPro:IPR007275) Range:  from: 7180431    to: 7183671    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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