Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ANAC46       <----------ID1                                                                  --------->ANAC58    --------->DAG2           <---------DAG2                                       <---------ALFIN1 ------>ZmHOX2a(1)           <----------DOF2           ----------->GT1       --------->ANAC58     --------->TOE2(3)      <---------ANAC58        --------->MYB52(1)           --------->ANAC58    ----------------->AG      <---------ANAC58     <---------ANAC55(2)         --------->TOE2(3)  <---------AHL20(2)     --------->ATHB12      --------->ANAC55(2)         --------->TOE1(3)  --------->AHL20(2) ---------YAB1          <------ZmHOX2a(2)            ------->TEIL --------->ANAC58  ---------->DOF2   tgaagattgagtgcttttttgtttcgatcacataacgatgagttaataacttaagaaccttaagctacacacaaattttaatcctaaaaaggctacaaat  7177400                                      --------->TOE2(3)                             --------->YAB1                            <---------YAB1                           <---------ARR11(3)                             --------->ARR11(3)                 --------->ARR11(3) --------->ARR11(3)                    <---------ARR11(3)                --------->YAB1      <---------ARR11(3)                ---------->DOF2   --------->ICU4<---------ARR11(3)--------->RVE1(1)            <---------HSFB2a(2)             -----   <---------ATHB12        --------->ARR11(3)     --------->ANAC46---------->DOF2            -------- --------->GLK1(1)        --------->YAB1    <---------DAG2 <---------ANAC58   --------->At4g35610 <---------GLK1(1)       <---------YAB1     <----------DOF2<---------ANAC58<------ZmHOX2a(2)---------   tggaaatcatttatctaattatcttctatgatcataaaaatctcaacttttcacaccaatttcgttcccaaagaaagatcagaggcaaaaacaaataaaa  7177500                                                                      <--------P       <----------DOF2--------->YAB1                               <---------TOE2(3)       --------->TOE1(3)                                           --------->MYB59       --------->TOE2(3)              <---------WOX13(1)           --------->DAG2 ---->AHL20(2)       --------->AHL20(2)                            <---------TOE1(3)            ----- ->AHL20(2)    ----------->GT1      --------->ATHB12 <---------------AGL15                      ===== >AHL20(2)---------->DOF2          <---------YAB1    <----------DOF2----------->GT1      --------->GLK1(1)   aaatcgaaactttaaagaggcaaataaaaatcgagacctgattgatcagtagaagctttaaggggcaataaggtaagtcttcgtctgagagaaatcgatc  7177600                   <---------ZAT14                   --------->ZAT14                  <------ZmHOX2a(1)                 --------->ANAC58                 --------->ANAC58              --------->ZAT2  ------>ZmHOX2a(1)              --------->At4g35610                                                       <---------ZAT6              <---------ZAT2  --------->HSFB2a(2)       <---------ANAC58          <---------MYB46(3)        --------->DAG2        <---------HSFB2a(2)       <---------ANAC58--------->ARR11(3)    -------       ---------->DOF2    <---------ZAT18       <---------ANAC46        --------->GLK1(2)     ------- ->ZmHOX2a(2) <---------At4g35610            ----------->HVH21          <-----------ARR10     ------- ========================HOX2a_HOX2a>>>>>>>>>TBF1       <---------ANAC46<---------ARR11(3)  ---------   gtccatgggtaaagggagcaggacactgtgtcctcgaagaagaacaagtgatgggtttgcgagaaattgcagaaaatctagggattgttagagtaaaagc  7177700                           <---------ANAC58                           <---------ANAC46                        <---------WOX13(1)                      --------->ATHB12                                                            <--                     <---------ATHB12                                                            <---                  --------->DEAR3(1)                                                            <----               --------->ANAC46                                                               <------               --------->ANAC58      <---------MYB52(1) --------->SPL7                        <------               --------->ANAC58     <-------GAMYB     ----------->HVH21                       <------    <----------DOF2  <---------YAB1------>ZmHOX2a(2) <---------HSFB2a(2)            <----------DOF2 -->ANAC58   <---------ALFIN1     <------ZmHOX2a(2)  --------->LBD16              <---------HSFC1(2) -->ANAC58  ----------->HVH21    --------->ARR11(3) --------->HSFB2a(2)           --------->HSFC1(2) -->ANAC46 <-----------HVH21     <---------ARR11(3) <---------LBD16      --------->DAG2       <------ ->DOF2   --------->ANAC46 <---------ANAC58        <---------LBD16      ---------->DOF2   <---------GLK1(1)   catcgtctttatccctcacgccgatgattgagtgagatcgttgttttctcttgtccgggacgaagaacaaaaaaaaaagttagaagctttggatttgtgt  7177800 -----GAMYB ------MYB46(3)                                            <---------AHL20(2) -----AtMYB61                                         <---------YAB1 ---ANAC58                                     <---------ARR14(2)                      <------------CBF ---ANAC46                        *TSS      <---------TOE1(3)                     ------->MYC3 ---ANAC58                <---------At5g28300  --------->ARR14(2)                 <-------MYC3------- -----RAV1(1)            <-----------GT1   <-----------RAV1(2)                   <---------ANAC46   ggttgagaattgagatggtgatgttttttactgtgtgagatagtttcaggttccttctgatttttttgttttgttttgtttcaacgtgtaattggaggga  7177900                                         <-----------TGA1                                        --------->TGA1a                                        --------->O2                                        --------->bZIP60(2)                                        <---------O2                                        --------->ANAC46                                        --------->ANAC58                                        --------->ANAC58                                      <---------ALFIN1                                 <---------ANAC58                           ----------------------->TaNAC69(2)        ----------->ARR10 ------>ZmHOX2a(2)                           <---------ARR11(3)       ==========================HOX2a_HOX2a            --------->AHL20(2)       <------ZmHOX2a(1)<---------ARR14(2)   --------->ICU4           --------->ARR11(3)    <------ZmHOX2a(1)   --------->ARR14(2)--------->TGA2(2)     --------->YAB1    ----------->GT1    =============================HOX2a_HOX2a <---------YAB1  --------->YAB1      --------->MYB59 ---->GT1  --------->CCA1(2)     <---------ANAC58  ----------->GT1 --------->AHL20(2)    <-----------GT1   aaattaggaggagataagcgaagttggatcgtctagcgttccacgtcatgattttgaaaaaaataagaataaaatcttgaattttggtaaattaccaaaa  7178000                         <---------YAB1                         <---------AHL20(2)                      --------->ARR11(3)                      <---------ARR11(3)                     <<<<<<<<<RAP2.2                <---------ICU4               --------->ICU4              <---------AHL20(2)              <---------AHL20(1)                                     <---------ANAC46             --------->YAB1                                   <---------AHL20(2)            <---------YAB1  <---------YAB1               --------->AHL20(2)           --------->AHL20(1)                            <---------AHL20(2)           <---------AHL20(1)                        --------->AHL20(2)      ----------->GT1           --------->AHL20(2)                      <----------DOF2  <---------TOE2(3)           <---------AHL20(2)           <---------AHL20(2)   <---------AHL20(1)       <----------ID1          --------->YAB1 --------->ICU4 --------->AHL20(1)   <---------AHL20(2)       --------->ANAC46         <---------YAB1<---------CCA1(1)--------->AHL20(2)   --------->AHL20(2)     --------->MYB52(1)   acaaatattgtattataatatttagatattattagtcacaaataaaatgaattctttatataattttttttacgtagaattgaaataaacgaaaaaaaaa  7178100                                                                          ---------->DOF2                                                                        --------->At5g28300                                                                ------->GAMYB                                                               --------->MYB46(3)                                                              <---------At4g35610                                           <---------AHL20(2) --------->At4g35610                                   <---------YAB1        <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   --------->ICU4        --------->At4g35610----------->GT1                                 <---------ICU4        --------->YAB1  ----------->GT1                        --------------->AtSPL8       <-----------GT1--------->MYB52(1)                        <---------------AtSPL8<---------YAB1 --------->MYB52(1)>>>>>>>>>>GT-3b   <---            <---------ICU4       --------->YAB1     <-----------GT1<---------WRKY12          --------            --------->YAB1       <--------HAHB4    <---------AHL20(2)  ------->GAMYB--------->MYB52(1)           <---------ATHB12     <---------ATHB12<---------AHL20(2) <---------WRKY38(1)      <--------   aactctaactcaaatcataacaaaaatatgtacaatcatttttagtttattattttatcatctcaacggacaacggtaaagaaaaataagggttttgatt  7178200                          --------->YAB1                         <---------YAB1                        --------->AHL20(1)                        --------->AHL20(2)                                                   --------               <---------ZAT18                                                    <---------ICU4               --------->ZAT14                                                   --------->AHL20(2)            ----------->GT1      --------->AHL20(2)       <---------ANAC46       --------->ICU4   <----------ARF1      <---------AHL20(2)                ----------->GT1        <---------ATHB51 --------RAV1(1)       --------->YAB1                    --------->ALFIN1        <---------AHL20(2)-- ->ATHB12 <---------ARR11(3)   >>>>>>>>>GATA-1       <---------ICU4--------->ANAC55(2)       -------- -YAB1  <---------YAB1<---------YAB1              --------->YAB1   <---------ANAC55(2) <---------TOE2(3)   tgtgggagtcaagatagtaaactcattataatagataaattgtacatatgcatcatcatgtggtgaatcacctattggtataaataattaagaaaccata  7178300  Previous    Next  AGI:  At4g11960.1    Description:  PGRL1B (PGR5-LIKE B). similar to PGR5-LIKE A [Arabidopsis thaliana] (TAIR:AT4G22890.1); similar to PGR5-LIKE A [Arabidopsis thaliana] (TAIR:AT4G22890.2); similar to PGR5-LIKE A [Arabidopsis thaliana] (TAIR:AT4G22890.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO63637.1); contains domain Zinc beta-ribbon (SSF57783) Range:  from: 7174880    to: 7177834    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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