Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------YAB1                                 --------->AHL20(2)         --------->TOE1(3)                                 <---------AHL20(2)         --------->TOE2(3)                            --------->AHL20(2)              <---------MYB59                            <---------AHL20(1)    <---------ANAC58                <----------DOF2<---------YAB1     <---------AtLEC2               <---------TOE2(3)      <----------DOF2   <---------ICU4            <---------ANAC58         --------->AHL20(2) -CCA1(2)  <----------DOF2  <---------AHL20(2)    <---------ANAC46         <---------AHL20(2)   aattcattcttttcttttctttttgatcattttatttttataagcgaaatttgcatgtataacctaaaaaaaacttattaattaagaaactaatctattg  7140300                                                                           <---------ALFIN1                                                                           --------->DEAR3(1)                                                                        <---------ALFIN1                                                                        --------->AtMYB61                                                                        --------->ANAC46                                                                  <---------ICU4                                                                  --------->YAB1                                                                 <---------YAB1            <---------At4g35610                      <---------ANAC55(2)                        --------->ICU4            <---------ZAT2                      ----------->GT1                          <--------HAHB4              --------->ZAT2                   --------->ICU4                              <--------ATHB1              --------->At4g35610                 -------->HAHB4                                --------->ATHB51         <---------At4g35610                 <--------HAHB4                                <---------ICU4    <---------ALFIN1                 --------->ATHB51                              --------->YAB1    --------->AtMYB61                 <--------ATHB1                               <---------ATHB51--------->AtMYB61                 --------->YAB1                               --------->ICU4  --------->DEAR3(1)                 <---------ICU4  <---------AHL20(2)           <---------ATHB12<---------ALFIN1                --------->ICU4 <---------AHL20(2)        ----------->RAV1(1) --------->MYB46(3)  <---                --------->AHL20(2)   <-----------GT1     <---------ALFIN1  --------->AtMYB61    <----                <---------YAB1--------->AHL20(2)         --------->ANAC46 --------->MYB46(3)  ------>NtERF2                <---------ATHB51--------->YAB1        --------->ANAC46 --------->MYB46(3)<---------RAP2.6(2)              --------->YAB1<---------AHL20(1)     <---------ALFIN1  <-----------GT1<-----------RAV1(1)             <---------YAB1 --------->AHL20(1)    ------>ZmHOX2a(1)<-----------GT1<XXXXXXXXXXXXXXXXXX        --------->ZAT6--------->ANAC55(2)      ---------->ID1 --------->AHL20(2)--------->MYB46(3)  <   caaaaaacttacactataataattatgtaatatataatattacaagtttgtcctcacccccacaataattatcaccaccaccaccactgttgctgctgcc  7140400                                --------->RAP2.3(2)                                --------->RAP2.3(3)                                --------->RAP2.6(2)                                --------->ATERF1(2)                                --------->DEAR3(1)                                --------->ANAC46                               --------->ATERF1(1)                               --------->ERF1                              ------>NtERF2                            --------->ATERF1(1)                           <---------ATERF1(1)                           ----------->RAV1(2)                           --------->ZAT2                           <---------At4g35610                           --------->At4g35610                           ------>NtERF2                           =======================RAV                          --------->DEAR3(1)                         --------->ATERF1(1)                         --------->DEAR4(2)                         --------->RAP2.3(1)                         <------NtERF2                        <---------RAP2.3(1)                        ------>NtERF2                        --------->ABI4(1)                        <---------ATERF1(1)                       --------->RAP2.6(2)                       <---------ATERF1(2)                       --------->DEAR3(1)                       <---------ALFIN1                       <---------DEAR3(1)                       --------->ANAC46                       --------->ATERF1(2)                       --------->RAP2.3(3)                       --------->RAP2.3(2)                      --------->DEAR4(2)                   --------->ATERF1(1)               <-----------HVH21<---------ATERF1(2)              --------->bZIP60(2)              --------->ANAC46--------->At4g35610              <---------bZIP60(1)              --------->bZIP60(1)  <---------ALFIN1              --------->O2<---------DEAR3(1)              <---------O2--------->RAP2.3(2)              --------->TGA1a <---------At4g35610              <---------TGA1a <---------ATERF1(1)       <---------ZAT2 --------->ERF1      ------>NtERF2--------->DEAR3(2)     <---------ALFIN1 --------->RAP2.3(1)     --------->DOF5.7(2)     --------->DEAR3(1)--------->RRTF1(2)    <-------GAMYB    --------->ATERF1(1)--------->RRTF1(3)  --------->RAP2.3(1)    <------NtERF2 <---------ATERF1(1)      <------NtERF2   <---------ATERF1(1)--------->ORA47(2)  ------>NtERF2   ------>NtERF2--------->TGA2(2)<---------RAP2.6(3)   <---------RAP2.6(3)--------->RRTF1(1) --------->ATERF1(2)  --------->ANAC46<---------At5g28300    <---------ATERF1(2)  --------->DEAR3(1)--------->DEAR3(1)   --------->RAP2.3(2)  <---------ATERF1(2) --------->RAP2.6(1)--------->DEAR3(1)  --------->ATERF1(2) --------->ATERF1(1)--------->RAP2.6(2)  --------->RAP2.3(3)<---------ATERF1(1)--------->ERF1   -------->P         =========================  --------->RAP2.3(2)--------->ABI4(1)  --------->RAP2.3(1)                 ----------->RAV1(2)  --------->RAP2.6(2)------>NtERF2<------NtERF2 <---------DOF5.7(2)    <---------bZIP60(1) --------->RAP2.3(1)--------->ANAC46   <---------ATERF1(1)<---------LBD16 <---------ALFIN1 --------->ERF1<-----------TGA1--------->RAP2.3(1)     ------>ZmHOX2a(1)<-----------HVH21 ------At4g35610----------->HVH21------>NtERF2<---------MYB52(1)       --------->bZIP60(1) -----ALFIN1  =======================================MYC_MYB--------->LBD16 <---------At4g35610 XXMIR834    <-----------STF1--------->DEAR3(1) <---------At5g28300------->TEIL               <------ ---------ATERF1(1)--------->MYB46(3) <-----------RAV1(1)--------->MYB52(1) --------->At4g35610   actgccgccaccttcgacgtcaccgccgccgctgccgccactgccgccgttaccgtccttaccggaatgaatgccatcacctgagccattactccattgt  7140500                                             --------->DEAR3(1)                                           <---------At5g28300                      <-----------RAV1(1)                                        <-----------HVH21                           <---------MYB46(3)                                     --------->ZAT2    ------>NtERF2              <-------GAMYB  ----                                     <---------At4g35610 --------->DEAR3(1)      <---------MYB46(3)                                     <---------ZAT2 <-----------HVH21         --------->DEAR3(1)-----                                     --------->At4g35610<------NtERF2      <---------ALFIN1   <------                <---------ZAT14    <------NtERF2 <-------GAMYB            --------->MYB46(3) <------- <---------GLK1(1)    <---------At5g28300----------->HVH21                <---------MYB55(2)--------- =====RAV <-----------HVH21      <---------DEAR3(1)<-----------RAV1(1)    <---------ABI4(2) --------- -----RAV1(1)   --------->ZAT14<-----------HVH21<---------MYB46(3)      --------->ARR14(2) <---------   tggggttcccattgtcactggagtcactgccatcgtcggagctgtcaccgtcgttgtcgccgaagttatcgctggaaccaccgtcgttgttggagtcacc  7140600                                    <------NtERF2                                    --------->ATERF1(1)                                   --------->LBD16                                 <------NtERF2                                 --------->ATERF1(1)                                 <---------LBD16                                ------>NtERF2                               --------->DEAR3(1)                              --------->ATERF1(1)                             <---------ATERF1(1)                             <-----------HVH21                             ------>NtERF2                            --------->DEAR3(1)                            --------->O2                            --------->RAP2.3(2)                      --------->RAP2.3(1)                           --------->ATERF1(1)                       <------NtERF2                           <------NtERF2                            <---------ATERF1(1)                           --------->RRTF1(1)                       ------>NtERF2                           --------->ERF1                           <---------At4g35610                           --------->RAP2.3(1)                     --------->ARR14(2)                          --------->ABI4(1)                       <------NtERF2                         --------->RRTF1(3)                       --------->ATERF1(1)                         --------->RAP2.3(2)                     <---------ATERF1(1)                         --------->RAP2.3(3)                     --------->LBD16                         --------->DEAR3(1)                    <------NtERF2                         <---------DEAR3(1)                    --------->ATERF1(1)                        --------->RRTF1(1)                     <---------LBD16                        --------->RAP2.6(1)                   ------>NtERF2                        --------->ATERF1(1)                   <---------ATERF1(1)                        --------->DEAR4(2)                   <---------DEAR3(1)                        --------->RAP2.3(1)                  --------->DEAR3(1)                        <------NtERF2                       <------NtERF2                        --------->ORA47(2)                  --------->ATERF1(1)                        --------->ERF1                     <---------ATERF1(1)                       <---------ATERF1(1)                 <-----------HVH21                     ----                       <---------ORA47(2)                  ------>NtERF2                         <---                       <---------RAP2.3(1)                <---------O2                          -----                      --------->DEAR3(1)                  --------->O2--------->DEAR3(1)    ---------                     --------->ATERF1(1)                  --------->DEAR3(1)                ------>NtERF2                    <---------ATERF1(1)                  --------->RRTF1(1)                 <--------                    <-----------HVH21                    --------->RAP2.3(1)               --------->DREB2C(2)                   <---------ARR14(2)                    --------->ERF1--------->At4g35610 --------->ANAC46                   --------->ARR14(2) ------>NtERF2     ------>NtERF2--------->ATERF1(1)   --------->DEAR3(1)                  <------NtERF2<---------DEAR3(1)       --------->ABI4(1)        <------NtERF2-------                 --------->LBD16<---------ATERF1(1)    --------->ANAC46<---------At4g35610--------->MYB46(3)      <---------At5g28300--------->ANAC46              --------->DEAR3(1)      <---------ETT(2)------    --------->MYB46(3)<---------DEAR3(1)              --------->MYB46(3)       --------->ETT(2)<----- ----->At4g35610--------->DEAR3(1) <---------ATERF1(1)--------->ATERF1(1) --------->At4g35610 <------ ---->DEAR3(1) <---------LBD16<------NtERF2           --------->DEAR3(2)  --------->ZAT14<---------At5g28300 ---At5g28300  <------NtERF2<---------O2             <---------At5g28300  <---------ZAT14<---------ATERF1(1) --WRKY38(1)   --------->ATERF1(1)--------->DEAR3(1) <---------ATERF1(1)  <---------At4g35610-------- -->HVH21<-----------HVH21------>NtERF2  <-----------HVH21--------->RAP2.3(2) --------->ATERF1(1)---- >ATERF1(1)   ------>NtERF2--------->DEAR4(2)     <-----------HVH21<---------ARR14(2)   <---------WRKY38(1) --HVH21--------->DEAR3(1)<---------ATERF1(1) --------->DEAR3(1)--------->DEAR3(1)    <-----------HVH21   gctggaatcaccgtcgcgccggagtcgccgccgtcgccggagccatcaccgaagtcaccgccgtcgccggagccgctgcagtcgccagagtcaccgccac  7140700       <---------ICU4       --------->ATHB12      <---------YAB1      --------->ICU4    --------->YAB1                                                           --------->At5g28300 ----->DEAR3(1)                                <-----------TBP              <---------ZAT6 ------ALFIN1                               <-------TEIL                    ----------->GT1 ---->MYB46(3)                         <---------WOX13(1)                 <---------At5g28300 >ABI4(1)                             <------------CBF                   <-----------GT1 -ATERF1(1)--------->AHL20(2)    --------->MYB59                     <---------AHL20(2) -->DEAR3(1)                     --------->MYB46(2)                  --------->AHL20(2) >NtERF2   <---------AHL20(2)    ----------->GT1                     <---------ICU4 ----ATERF1(1)                   --------->MYB52(2)            --------->TOE2(3)          <---------AHL20(2) ---ALFIN1--------->AHL20(2)  ------------>MYB.PH3(2)        <---------AHL20(2)     ----------->GT1 ->ERF1<--------HAHB4<----------DOF2<---------AHL20(2)<---------ZAT6--------->ICU4 --------->AHL20(1) ----->AtMYB61  <-----------GT1<---------MYB52(1)     ----------->GT1--------->ATHB51     --------->AHL20(2)   cacctataatcatttaataaaccctttagattagttagttaattgatacatatatagtgttattttcttaattatttactgtaaatatgttataaatttt  7140800                     <---------WOX13(1)                    <------------CBF                  <---------AHL20(2)                --------->TOE2(3)                <----------DOF2               <-----------------AGL3                                                              --            <----------DOF2                                        --------->YAB1               -----       --------->MYB52(1)                               ---------->DOF2                         -----     <---------MYB52(2)                            --------->AHL20(2)  --------->YAB1           -----   --------->ZAT6 --------->AHL20(2)              --------->AHL20(2)--------->TOE2(3)         -------   ttcttacactaacgctttctttaattgaaaaataagatgtatacagtagacattaaaaaaaagactcattcattaatcacatatggcatagtggtccaaa  7140900                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)      ----                                                                        --------->RVE1(1)     -------                                                                        --------->CCA1(1)    ------->GAMYB                                                                      <---------ICU4        ---------                                                                      --------->AHL20(2)  <----------                                                                --------->YAB1            --------->YAB1                                                               --------->ZAT6          --------->YAB1     --------->ARR14(2)                         --------->DAG2------------>CBF         <---------ICU4 --------->RAV1(1)                  --------->At4g35610      <-----------GT1         --------->AHL20(2) ---->ANAC58                  <---------TOE2(3)---------->DOF2<---------TOE2(3) --------->AHL20(2) ---->ANAC46    --------->ANAC46    <---------At4g35610 --------->ICU4--------->YAB1 --------->AHL20(1) ---->ANAC58    --------->ANAC58 <---------ANAC58   ----------->GT1--------->YAB1--------->YAB1  ---- --->DOF2       --------->ANAC58 <---------ANAC58  ----------->GT1<---------ATHB51  --------->YAB1   gccacagtaacctcttacacgaagttcgaaataaggcttgctgactcgataaagtggaaaaattaacaataataatatctcattaaaaataataacaacc  7141000                                                                                              ------>ZmHOX2a(2)                                                                                              <------                                                                                             <------ZmHOX2a(2)                                                                                            <--------                  --------->YAB1                                                          --------->MYB59             --------->AHL20(1)                                                           -----------   XXXXXXXXXXXXXXXXXXXX>MIR837-3P                                                     <---------ICU4  --------->MYB46(3)                                   --------->GLK1(1)             --------->ICU4 ----->TOE1(3) <---------ICU4                         --------->ARR14(2)        ----------->GT1 ->P         --------->AHL20(2)                       <---------ARR14(2)        --------->ANAC58 >MYB46(3)  --------->YAB1                      >>>>>>>>>SARD1                  --------->ANAC58 <--- -GT1     --------->AHL20(2)                    >>>>>>>>>CBP60g             --------->ANAC58--------- ----->TOE2(3) --------->YAB1              ------->GAMYB                    --------->ANAC58---------   cttaacaaacaaaaaaataataacaacaacgacttaagtttacaactgaaatttgggatatgttcacataagaaaacgaagcaagtaaaaattagatccg  7141100                                                    ---------->DOF2                                                <---------YAB1                                              --------->YAB1 <---------ANAC46                             <---------ICU4 <---------ANAC58                             -------->HAHB4 <---------ANAC58                            --------->ICU4 -TEIL                                     --------->YAB1                  <----------DOF2 -ARR14(2)                                 <---------ICU4               <---------ALFIN1 <---------AHL20(2) >ARR10                                   <---------AHL20(2)       <-----------GT1      <---------ARR11(3) ------MYB52(1)                           --------->ICU4       <---------ARR11(3)       <---------AHL20(1) >ARR14(2)                                --------->AHL20(2)   <---------AHL20(1)       --------->ARR11(3) >AGP1           ------->TEIL             <---------ATHB51     --------->AHL20(1)  ----------->GT1   ttcgcttgtaatacatatgcacataccaatttccaaaattctaaataattatgagaaagaaacaatatataacaacactttaatacagtatatattttgg  7141200  Previous    Next  AGI:  At4g11870.1    Description:  unknown protein Range:  from: 7140489    to: 7140713    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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