Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------->GAMYB          ----------->HVH21         <------------AtMYB77 --------DOF2 ----------->AGL15                           --------->AHL20(2)                   <---------At4g35610 ------DAG2                               --------->WOX13(1)               <---------YAB1 ------------AGL15             ----------->HVH21 --------->AHL20(2)   <---------DAG2 -----GT1<---------MYB52(2)  <---------ZAT6 <---------ATHB12 --------->ARR14(2)   --------->At4g35610   ctttactagtaactgacatagccttgaattagtgtgacacattccaatcaaataaaaactataaatctgcaacctttcttattcaactgagcaatagaag  7120800                                                                    <---------AHL20(2)                                                                    --------->YAB1                                                                    --------->AHL20(2)                                                                   <---------YAB1                                                                 --------->ATHB51                                                                 <--------ATHB1                                                                 --------->YAB1                                                                 <--------HAHB4           ------->TEIL                                          <---------ICU4        <---------YAB1                                          <---------ATHB12         ---------->DOF2      <---------ICU4          --------->HSFC1(1)                --------->ICU4   --------->ARR14(2)      --------->YAB1          --------->HSFB2a(2)               --------->AHL20(2)<------ZmHOX2a(2)     --------->ICU4           <---------HSFB2a(2)               <---------ATHB51 <---------ARR14(2)     <---------ATHB12         <---------HSFC1(1)         --------->WOX13(1)  <---------ALFIN1     <---------ATHB51--------->TOE2(3)                  <---------ICU4    --------->ANAC46   --------->WOX13(1)--------->TOE1(3)   --------->YAB1<---------ATHB12  --------->MYB46(3)   atgatcaattatgaatttctaaaccctaatttctcgaacaaaatcagaaaactagtaatcaatccaataattatatccaccacgatccagtgaaagtcaa  7120900                                                                        <------NtERF2                                                                      <---------ANAC46                                                                     <---------LBD16                                                                     --------->ATERF1(1)                                                                     <---------At4g35610                                                                     --------->RAP2.3(1)                                                                     --------->At4g35610                                                                     <------NtERF2                                                                    <---------ATERF1(1)                                                                    <---------RRTF1(1)                                                                    <---------RAP2.6(1)                                                                    <---------ERF1                                                                    <---------RAP2.3(1)                                                                    <---------ORA47(2)                                                                   <---------DREB2C(2)                                                                   <---------RAP2.3(3)                                                                   <---------RRTF1(2)                                                                   <---------RAP2.6(2)                                                                   <---------ANAC58                                                                   <---------RRTF1(3)                                                                   <---------RAP2.3(2)                                                                   <---------DEAR3(1)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   --------->ATERF1(2)                                                                --------->ALFIN1                                                            <---------ZAT14                                                            --------->At4g35610                                                            <---------ZAT2                                                            <---------At4g35610                                                     ---------->DOF2------>NtERF2   --------->At4g35610                                                  --------->ANAC58 <---------ATERF1(2)     --------->ZAT14                               --------->MYB52(1) --------->ANAC46<---------ABI4(1) <---------At4g35610                               -------->P         --------->ANAC58--------->ATERF1(1)      <---------ZAT14   acaaatgcaaatcagagagagagagagaatacatacccgaatagaaacctagacgcaaagggagcagtggcggcggaagagaaggaagatgagtgaagac  7121000                          <------ZmHOX2a(2)                         --------->AGP1                         <---------AGP1             --------->GLK1(1)                            <---------MYB52(2)             <---------GLK1(1)                            --------->MYB46(3)          <---------TOE2(3)------>ZmHOX2a(2)       --------->ICU4 <---------AtLEC2        <---------ARR11(3)   --------->ANAC58         --------->ATHB12 <---------ANAC58        <---------ARR14(2)   --------->ANAC46     --------->ZAT2 --------->ARR14(2) <---------ANAC58        --------->ARR11(3)   --------->ANAC58     <---------ZAT2 <---------ARR14(2)   tgtgcttggattgagatttcttcagtagatctaaaactatagctattctcgccattactaacaaacccaagcttgattcgatcgaatacacaaatctctc  7121100                                                                                              -------                                                                                             --------                                                                                             <-------                                                                    <---------YAB1         --------->LBD16                                                                 <---------ARR14(2)      <---------LBD16                                                                 --------->ARR14(2)     ------>NtERF2                                           --------->REM1(1)   <---------MYB46(3)      --------->DEAR3(1)              --------->TOE2(3)   ------>ZmHOX2a(1)           --------->ALFIN1    --------->ARR14(2)<   tctctatgcctcttaatctcaattgaagtaatcttcctcgtttctacatcggagactcgtccgagtggttccgattaaactccaaatcgcctccggtgta  7121200                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ======                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                           ==========                                                                                           ------->GAMYB                                                                                ------>MYB83 <-------                                                                                ------>MYB46(1)<-----                                                                <---------AHL20(2)      --------->MYB52(1)                                                               --------->AHL20(1)    --------->ANAC46                                                            <-----------TBP    <---------ALFIN1------                  ---------->DOF2      *TSS     <---------YAB1 <---------AHL20(1)    --------->ANAC58              <---------ANAC46     --------->ANAC58         --------->AHL20(2)--------->MYB46(3)<---- -->ZAT14     >>>>>>>>CAMTA3       --------->ANAC58       <----------DOF2     <---------MYB55(2)<---- ->ALFIN1     <---------ANAC55(2)  <---------ANAC55(2)    =========================================== --REM1(1)--------->CCA1(2)        --------->ANAC46  <-----------GT1     <-----------HVH21--------->ANAC46 ----------DOF2 ----------->HVH21 <---------LBD16<---------AHL20(2) <-----------GT1  --------->ANAC58   gcctttgaagagaaacgcgtgaaagagagagagaaacacgggagtcgatttttattttctctttatatattttcccttcacccactcacacaacgacacg  7121300    <---------CCA1(2)  --------->ANAC46 ------->HVH21 ----->TGA2(2) --->ANAC58 --->O2 --->TGA1a ----O2 --->ANAC46 --->ANAC55(1) ----bZIP60(1) ============================bZIP_DOF --->bZIP60(2) --->bZIP60(1) --->ANAC55(2) ----TGA1a -----STF1 ====MYC_MYB --ALFIN1 ----ANAC55(2)                             <-----------RAV1(1)                                  <---- --->ANAC58               --------->MYB52(1)      <---------LBD16                             <------ -------HVH21     <----------DOF2        ----------->RAV1(2)              --------->YAB1  <---------ANAC46 -------TGA1   --------->GLK1(2)       <-----------GT1    <---------YAB1 <-------TEIL     <---------ANAC58 ====bZIP_DOF <---------GLK1(2)     <----------DOF2<---------HSFB2a(2)  --------->GLK1(2) <---------ANAC58   tcacccgtctcttagagattcttttggcaaacagaagacttttacctgttgctctggatgatttttggtctgagattcagaatgggaaagtttcttgagg  7121400                                                                        <---------ATHB12                                                                    <---------------AGL15           <                                                                    --------------->AGL15           -                                                                   ----------------->AGL2          <-                                                                   ----------------->AG            <-                                                                   ----------------->AGL1    ------>ZmHOX2a(2)                                                              --------->ARR11(3)            ---------                                                              --------->GLK1(2)            <---------ARR11(3)        <---------GLK1(2) <---------ANAC55(2)          ----------->GT1------>MYB46(1)      --------->ARR11(3)  --------->ANAC58        ----------->GT1            <------ZmHOX2a(1)------>MYB83     --------->ZAT2  --------->ANAC58 ------->GAMYB                 ---------->DOF2  -------->P           <---------ZAT2 --ZmHOX2a(1)     --------->MYB46(3)    <---------ALFIN1      <---------ARR11(3)       --------->At4g35610 ---TOE2(3)     <-----------GT1        <---------REM1(2)     --------->RVE1(1)         <---------At4g35610   aaggaagcaagattgttctaaccacatcaagtgaaattgtctccacagtagcaaaggatgaaaaaatctaccaaatgaagaatgttgggagctgatctct  7121500               <---------AHL20(1)               --------->AHL20(2)               --------->AHL20(1)        --------->HSFB2a(2)        <---------HSFB2a(2) <---------ARR11(3)     <----------DOF2    ------->GAMYB                                <---------ARR11(3) ---------GLK1(1)      --------->MYB46(3)                            --------->ARR11(3) -------->GLK1(1)     -------->P                           <---------ZAT14     --------->ANAC46 --------ARR11(3)    --------->WOX13(1)                    --------->ZAT14     --------->ANAC58 --------GLK1(2)<---------AHL20(2)                <------ZmHOX2a(1)--------->MYB59         ---------- >GLK1(1)     --------->YAB1--------->ARR11(3)---------->DOF2  <---------ZAT6  --------->ANAC58<-----   agatttccttttggaaatataatcaaccaagaactagaaggaattgggaaaaggattgcagaacagtgtaaggtcttgaacgagccattgcatcaaagaa  7121600                   --------->ARR14(2)                   <---------ARR14(2)                   <---------ARR11(3)               --------->ZAT6           --------->ANAC58                                         <---              >>>>>>>>>>AtWER           --------->ANAC58                                         ----    --------->ANAC58         <XXXXXXXXXXXXXXXXXXXXMIR778                                        <----    --------->ANAC46      <---------HSFB2a(2)                                                 <------    --------->ANAC58   ------>ZmHOX2a(1)------>MYB46(1)                               --------->At4g35610 >DOF2   --------->REM1(1)--------->HSFB2a(2)               ------>ZmHOX2a(1)         <---------At4g35610 ----GLK1(2) --------->MYB52(1)         ------>MYB83     ------>ZmHOX2a(1)  <----------DOF2  <-------   tttctcaagctacactaacagtatccttccagtacttaaaccaagctatgactctcttcctcctcaacttaagcgatgctttgccctctgctcaattact  7121700  Previous    Next  AGI:  At4g11830.1    Description:  PLDGAMMA2; phospholipase D. Identical to Phospholipase D gamma 2 (PLDGAMMA2) [Arabidopsis Thaliana] (GB:Q9T051;GB:Q3EA52;GB:Q9XH77); similar to PLDGAMMA3 (phospholipase D gamma 3), phospholipase D [Arabidopsis thaliana] (TAIR:AT4G11840.1); similar to PLDGAMMA1 (maternal effect embryo arrest 54), phospholipase D [Arabidopsis thaliana] (TAIR:AT4G11850.1); similar to PLDBETA1 (PHOSPHOLIPASE D BETA 1), phospholipase D [Arabidopsis thaliana] (TAIR:AT2G42010.1); similar to phospholipase D [Gossypium hirsutum] (GB:AAD43343.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63646.1); similar to phospholipase PLDb2 [Lycopersicon esculentu Range:  from: 7115730    to: 7121239    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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