Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ICU4                       <---------YAB1                                                 <----------DOF2                    <---------MYB46(3)                                            <----------DOF2              ------->TEIL                                                     <-----------GT1           <---------YAB1                                                   --------->ARR11(3)         --------->CCA1(2)                                                  <---------ARR14(2)        --------->ARR11(1)                               --------->ZAT18    <---------GLK1(2)      <-        <---------ARR11(3)                    --------->YAB1--------->ANAC46<---------ARR11(3) <-----        --------->ARR11(3)<---------YAB1     <---------AHL20(2)             --------->ARR14(2)<------   gaagaagaaagatatgaatcggttgatgatgaaaactcaatttgtttttaataaacaagtccacgagaaaaattagcagattttctttctttatttttta  7112100                        <---------ICU4                        --------->YAB1                       <---------YAB1                       <---------AHL20(2)                    --------->AHL20(2)                --------->AHL20(2)                <---------AHL20(2)               <---------AHL20(1)                     <---------WRKY12           --------->AHL20(2)                         <---------WRKY38(1)           <---------AHL20(2)                         <---------WRKY45          <---------AHL20(2)                         --------->WRKY18(1)          --------->AHL20(2)                       <------MYB83       --------->AHL20(2)  <---------AHL20(2)      <------MYB46(1)       --------->YAB1--------->YAB1               --------->MYB59   ------>ZmHOX2a(1)<---------AHL20(2)       <---------AHL20(2)                                 ----- ----------GT1 --------->AHL20(2)           --------->AHL20(2)                       --------->AHL20(2) ----AHL20(2)  <---------AHL20(2)           <---------AHL20(2)                       <---------AHL20(2) ---AHL20(2)   --------->AHL20(1)      <---------AHL20(2)                 <---------MYB46(3)    <----   ttttcctaataaaaaaatttaatttataattagttgtgaattttttttaaatttggtcaacaaaatacttgtacagttgttcttcatttttttagttata  7112200                                                         --------->ATHB12                                                         <---------AHL20(2)                                                        <---------YAB1                                                     <---------AHL20(2)                                                    <---------ARR11(3)                                                    --------->ARR11(3)              <---------AHL20(2)                                                    <---------AHL20(1)          --------->YAB1                                                   --------->CCA1(2)            --------->AHL20(2)                                                  --------->ARR14(2)           <---------YAB1                                                  <---------ARR11(3)        --------->AHL20(2)  -----   <---------AHL20(2)                       --------->ANAC58                <---------AHL20(2)<------  --------->AHL20(2)                        --------->ANAC46              <---------ANAC55(2) <------ ---->AHL20(2)                              --------->ANAC58         <---------ICU4--------->AHL20(2) -----AHL20(2)                    --------->MYB52(1)--------->AHL20(1)    --------->ANAC55(2) <------   aattttaaatttcaaatttgatggttttgtttaaactaactgaaacatgccagatatatttattggtggaatcaatacttaattataaaatttttggtgt  7112300    <---------TOE2(3)   ---------->DOF2  --------->AHL20(2)  <---------AHL20(2)                                                             -------->P ------>GT1                                    --------->LBD16                   ------>MYB46(1) ---ANAC46                         <---------AHL20(2)                            ------>MYB83 ---ANAC58 <---------DAG2         --------->AHL20(2)                      ---------->DOF2 ---ANAC58 <----------DOF2 <-----------GT1   <---------LBD16      --------->MYB46(3)   gtaattaaagaaactttttggttcaaaattaacctattttatatttttctggggacaactacatgtgaacaaacaaaaaagcctaccaaaaaaaaaacaa  7112400                                 <---------LBD16                                ----------->RAV1(2)                                <---------ANAC46                                 <---------ARR14(2)                           --------->ATHB51                                      --------->ARR14(2)                           <--------ATHB1                                        --------->GLK1(2)                           -------->HAHB4                                       <---------ARR14(2)                           <---------ICU4                                       <---------GLK1(2)                           --------->YAB1                                   <---------LBD16                          --------->ICU4                                  *TSS--------->LBD16                          <---------ATHB51                                <---------SPL7                          <---------YAB1               <---------ANAC46<---------ZAT18                        --------->YAB1                 <---------ANAC58--------->ZAT18                       --------->AHL20(2)              <---------ANAC58--------->ZAT14      ------->GAMYB                 <-----------HVH21           <---------GLK1(1)         <---------ZAT14  <---------WRKY38(1)             --------->DAG2<--------HAHB4   --------->ARR14(2)      <------MYB83--------->ARR14(2)  <           ---------->DOF2--------->AHL20(2)<---------ARR14(2)      <------MYB46(1)     <---------WRKY12   gaacaaaaaaaaaaaaaggtgtcaaataataattacctggaaaatggatatgttgtgacttgtgagagattggtgcagtccggaatctggacaacgcaga  7112500                   <-------PIF5                <----------DOF2         --------->At4g35610                  <---------DAG2         <---------At4g35610               <-----------GT1        --------->MYB59              <----------DOF2             <-----------GT1    --------->MYB52(2)    <----------DOF2 <-----------GT1  <---------MYB52(1)                     <<<  <---------MYB52(1) <------------------------ANAC81      --------->TOE2(3)       ------>ZmHOX2a(1) ---------ANAC46   ------->PIF5  <-----------GT1    <---------YAB1 ------------>CBF            <-----   cttcgtgagttagctctccctcgtgcttctttttgtttccttttttacccttttcttattcgttaatttaccaattcgctactcctaaattttggttttg  7112600         <---------TOE1(3)         <---------YAB1         <---------TOE2(3)   <---------------AGL15                                                          ------->TEIL   --------------->AGL15                                                       --------->bZIP60(1)  <-----------------AGL2                                    <---------YAB1     <---------REM1(1)  <---------ANAC58    <------MYB83 <XXXXXXXXXXXXXXXXXXXXMIR841                 <---------bZIP60(1)  <---------ANAC58    <------MYB46(1)            <-------GAMYB          <----------DOF2 <<<<<<MYB2          --------->MYB59            --------->MYB52(2)     <---------ANAC58 ----AtMYB61         <---------AtMYB61          <---------MYB46(3)     <---------ANAC58   gttttcttgttatggtttttggtttggtttatgttttggattcaattggtttgttgataagtatgatagagtagctttctgatgtaacttggtgagataa  7112700                                                                         <---------YAB1                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                              ----------->GT1                                                            ---------->DOF2  --------->AHL20(2)    <-                                                     ----------->GT1   --------->YAB1              <-                                           --------->AHL20(2)--------->DAG2  <---------AHL20(2) <----                              <------ZmHOX2a(1) --------->AHL20(2)   <---------TOE2(3)      ---------                            <---------TOE1(3)   --------->AHL20(1)  ---------->DOF2    ----------->GT1                            <---------TOE2(3)   <---------AHL20(2)<---------YAB1  --------->AHL20(2)   cttggagttaagttcaatctatttggaattaaggattgtttttgaataaataaaatggataaaaaagtattaaagataattaaaaaatatagtataaatt  7112800                                                                       <-----------GT1                                                                   <---------DAG2                                                                   <----------DOF2                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  <---------ANAC46                                                               ---------->ID1                                                               <---------MYB52(1) --------DAG2                                                 <-------GAMYB<----------DOF2 ---------DOF2                 <-----------GT1               <---------ANAC58              ---------- -------GT1              <---------YAB1                      <---------ANAC58   <----------DOF2   <-- >AHL20(2)           ----------->GT1                     <----------DOF2<-----------GT1    <---------   actttttttttttggtagaaatatagtataattttacttataagtctgtatttgaatttcttttcgttgctttttatcttttcttttttgtttcatattt  7112900                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)       --------->AHL20(2)                                                            <---------GLK1(2)    --------->YAB1                         --------->AHL20(2)                --------->AHL20(2)   <---------ATHB12            <---------AHL20(2)      <------ZmHOX2a(1)    --------->AHL20(2) ----->AGL15      ----------->GT1          <---------AHL20(2)           <---------AHL20(2)          < -------TOE2(3)   <----------ID1    --------->YAB1   --------->MYB59    --------->AHL20(2)   -------- ------AGL15  ---------->DOF2  --------->AHL20(2)  <<<<<<<<<MYB98<----------DOF2 ---------->DOF2   --   aagaaatcataaattagaaagagaaaaatagatttaaattatagtttaattttgttaggaacttcaactttcatttaaataaaaaaagattttgtaaaag  7113000  Previous    Next  AGI:  At4g11820.1    Description:  MVA1 (HYDROXYMETHYLGLUTARYL-COA SYNTHASE); acetyl-CoA C-acetyltransferase/ hydroxymethylglutaryl-CoA synthase. Identical to Hydroxymethylglutaryl-CoA synthase (HMGS) [Arabidopsis Thaliana] (GB:P54873;GB:Q8L721;GB:Q9S707); similar to HMG-CoA synthase [Brassica juncea] (GB:AAG32923.1); similar to HMG-CoA synthase [Brassica juncea] (GB:AAF69804.1); similar to HMG-CoA synthase [Brassica juncea] (GB:AAG32922.1); contains InterPro domain Hydroxymethylglutaryl-coenzyme A synthase, active site; (InterPro:IPR000590); contains InterPro domain Hydroxymethylglutaryl-coenzyme A synthase C-terminal; (InterPro:IPR013746); contains InterPro domain Thiolase- Range:  from: 7108909    to: 7112474    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version