Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------ANAC58                                                        <---------ANAC58                                                   --------->YAB1                                                   -------->ATHB1                                                   <--------ATHB1                                                   <------------ATHB5                                                   --------->ATHB12                                                   <---------ICU4                                 --------->ANAC58  --------->ATHB51                                 --------->ANAC58 <---------YAB1                      --------->ANAC55(2)      --------->CCA1(2)       --------->WRKY18(1) <---------ATHB12                    --------->ANAC46     --------->ARR11(3)     --------->ANAC58      --------->ICU4                    <-----------GT1     <---------ARR11(3)     --------->ANAC46    --------->WOX13(1)             <---------ARR11(3) ------>YAB1                --------->ANAC58 <------ZmHOX2a(1)                 <---------GLK1(2) ------ATHB12           <-----------GT1   <---------At4g35610  <------NtERF2   --------->ARR11(3) --->WOX13(1)        <---------ZAT6       --------->At4g35610<---------LBD16 ----------->ARR10 <-----   tcatgtagatataagaaccaattgtgttacaagtcaagccagacagaggacaatcattgctagtcgggattgagaccataagattttcacttaacttctt  7083100                                                                               <-------TEIL                                                                            <------MYB83                                                                            <------MYB46(1)       <---------ANAC58              <------MYB46(1)                       --------->MYB59       <---------ANAC58              <------MYB83                          --------->MYB52(2)      --------->STY1(2)          <------ZmHOX2a(1)                         --------->MYB46(2)       <      <---------STY1(2)         <---------YAB1                           <---------MYB52(1)         <   <---------ANAC58          <<<<<<<<<MYB98      <------ZmHOX2a(1)    <---------TOE1(3)            <-   <---------ANAC58   ----------->ARR10   ---------->DOF2             <---------TOE2(3)           <-- -----DOF2       <---------STY1(1)  <---------AtMYB61    --------->MYB46(3)--------->MYB111(1)    ===   ttcttccttgctagtggccctagtgagatttgttaggattggtctaaagcaggatgtgaaccatcgtgacttaaggttaggttcagggctaggggttcga  7083200                                  --------->AGP1                             <-------GAMYB                                                          <                             <---------ANAC46                                                      --                           <---------TOE2(2)                                                       --                          --------->ALFIN1                                                         <-                         <-------MYC3                                                              <-                         ------->MYC3                                                        <-------                        =============MYC_MYB                                                ---------                        <---------O2                                                        <--------                        ================================================bZIP_DOF            <--------                        --------->TGA1a                                                     <--------                        <---------TGA1a                                                  ============                        --------->O2<-------TEIL                                         ============                       ------>MYB46(1)                                                   <------ZmHOX2a(1)                       ------>MYB83<------ZmHOX2a(2)         ---------->DOF2           <---------TOE1(2)                      --------->MYB52(1)             <---------ZAT2                   --------->HSFB2a(2)                     --------->TOE1(2)               <---------At4g35610              ------>ZmHOX2a(1)                     --------->TOE2(2)          <---------ANAC55(2)                   =============== ------MYB83        --------->MYB46(3)          --------->ANAC58                      <---------HSFB2a(2) ------MYB46(1)     --------->DEAR3(2)  --------->MYB52(1)--------->At4g35610         =============== --------AtMYB61 <---------ZAT14----------->ARR10    --------->At4g35610         --------->DEAR3(1)<- ------P         --------->ZAT18--------->MYB59 --------->ANAC55(2)           <---------ANAC58    <-- =================================MYC_MYB       --------->ANAC58              <---------ANAC58    <--   gttggtcttcggcatagagtgaaccaacgtgggttagatccataactgaaacgtaagctcagataaagacaattctcagtgcgtcgtcctaggagcgttc  7083300      ---------->DOF2 ------>ZmHOX2a(2) ------ZmHOX2a(2) ------->ARR11(3) ------->ARR14(2) --------ARR14(2) --------ARR11(3) --SPL7 >HSFB2a(1) -ANAC58                            --------->GLK1(2)            <--------P -HSFB2a(1)                        <---------GLK1(2)             --------------->AtSPL3 -ANAC58                           --------->ARR14(2)           <---------MYB52(1)               <--- =======HOX2a_HOX2a            --------->At4g35610         --------->GLK1(2)                  ------- ======HOX2a_HOX2a             <---------At4g35610         --------->ARR14(2)                -------- ======HOX2a_HOX2a          ---------->DOF2                <---------ARR14(2)               <-------- =======HOX2a_HOX2a  --------->TOE1(2)                    <---------GLK1(2)                 --------- --------AGP1 --------->ANAC55(2)  <---------ARR14(2)<------ZmHOX2a(1)             --------->ANAC58 -------ARR14(1)    ------>ZmHOX2a(2)              <---------TOE2(3)               --------->ANAC58 -------CCA1(2)     --------->MYB46(3)          <---------MYB52(2)----------->GT1  --------->ANAC46   ggatcttgtaaagctcaagtgatccaacgagagagcggaatctcttggaaactaaggagagaatcgggtagtacaatctcgagacacggcctaagatgtt  7083400                                                        <---------YAB1       <---------ATHB12                              <-------TEIL --------->YAB1      --------->ANAC58               <---------MYB52(1)         <---------TOE2(3) ----------->GT1     --------->ANAC58             <---------ANAC58        --------->ANAC58 ------AHL20(2)  <------MYB46(1)           <---------DAG2--------->YAB1   --------->ANAC58 ---->GT1        <------MYB83              <----------DOF2             <---------ARR14(2) --->GT1--------->YAB1       <-----------GT1      <---------ANAC46     --------->ARR14(2) -ARR11(3)      --------->MYB59    --------->At5g28300--------->YAB1  <------ZmHOX2a(1)          ---- >ARR11(3)    <------ZmHOX2a(1)  --------->ANAC46 <---------ANAC58 <---------LBD16       --------->YAB1   taatagtaaatcatcaggaaggtaaggcatattacacggtgaagactttatgccgttcatcatagattaccaggaaacgctaagaatgtaatcaaaaact  7083500                                                                            <---------YAB1                                                                            <---------AHL20(2)                                                                           --------->AHL20(2)                                                                       <---------ICU4                                                                       --------->YAB1                                                                      --------->ICU4                            <---------AHL20(2)                        <---------ATHB12          <----                        <---------AHL20(2)                       --------->ANAC55(2)           ------           --------->AHL20(2)            <---------YAB1 <---------ARR11(3) <---------AHL20(1)  <-----           <---------AHL20(2)      ------>ZmHOX2a(1)   <---------CCA1(2)   --------->AHL20(1) <<<<<<<         <-----------TBP--------->AHL20(2)      <---------GLK1(1)<---------ANAC55(2)   --------->AHL20(2)      <---------RAP2.6(3)   <---------ICU4 <------------CBF <---------CCA1(2)          <---------AHL20(2) -------->CBF <------------CBF    --------->TOE2(3)  ------>ZmHOX2a(1)------------>CBF--------->AHL20(2)   ccaatagccgtatttatattggagaaataaatatttcctaaatctaattgaactcctaaatcttatctcgtaatcaatataatcgagatttaatttagat  7083600                                                                                    <---------YAB1                                                                                 --------->GLK1(2)                                                                               <---------CCA1(1)                                                                               <---------RVE1(1)                                                                              --------->ARR14(2)                                                            --------->YAB1    <---------ARR14(2)                                                            <---------ICU4    <---------ARR14(3)                                                           --------->ICU4     <---------ARR11(3)                                                      <-------GAMYB   =========================HOX2a_HOX2a                                                     <---------MYB46(3)       --------->ARR14(3) -----CCA1(1)     --------->TOE1(3)                  ----------->GT1  ------>ZmHOX2a(1) ------>ZmHOX2a(2) --->ARR11(3)     --------->TOE2(3)         --------->ATHB12-------->HAHB4    --------->ARR11(3) ----ARR11(3) ---------->DOF2              <---------YAB1  <---------ATHB12 --------->ANAC58        - <<RAP2.2   <---------YAB1              <---------AHL20(2)<---------TOE2(3) --------->ANAC58       --   attatctaagtgctattaaagcttaatatgtctataacgaaatttatgatttagatggttaatgatgacttcctctgcaagatattctgatcggactaga  7083700             <---------ANAC46         <----------DOF2        <------------CBF           <-----------GT1      --------->AHL20(1)         <---------MYB59      --------->ARR11(3)        --------->ANAC55(2)      <---------AHL20(2)        <---------ANAC55(2)<---------YAB1      <---------AHL20(1)  <---------YAB1           <-----------RAV1(1)                       -------- -------->At4g35610     <-----------GT1        <---------GLK1(2)                <-------TEIL--------- ------->GLK1(2)   <---------AHL20(2) <---------DAG2                   ----------->GT1      <--------   gcatctaaaatattggtgtattttttttactattacttaactttaccaagattatgttgggctggactaaaatatgtgaaaatacatttatgcaatgatc  7083800                                                                                               ------                              <---------AHL20(2)                                              -------                              --------->AHL20(2)                                              <------                             <---------YAB1                                                  --------                           --------->YAB1                                           <---------AHL20(2)                          <---------YAB1 <---------ATHB12                          <---------AHL20(1)                         --------->AHL20(2)                                        --------->AHL20(1)                         <---------AHL20(2)  <-------TEIL                          --------->AHL20(2)                         --------->AHL20(1) --------->CCA1(2)             <---------YAB1<---------AHL20(2) ->YAB1                 --------->YAB1--------->TOE1(2)           <---------AHL20(2)--------->AHL20(2) >ICU4          <---------ARR14(2)   --------->MYB46(3)          --------->AHL20(2)<---------AHL20(2) -ATHB12        --------->ARR14(2)  ------->TEIL  --------->AHL20(2)      <---------TOE2(3)<---------   aaatgttgaatcaaaccgaatttgaattataataaatgaaccaaagattcaaaaaaatgtgttagaatttaaaattaagtttgaatttatttttttcctg  7083900        <---------ANAC58        <---------ANAC58        --------->HSFB2a(1)        <---------HSFB2a(1)                                                       <------ZmHOX2a(1)   <---------------AtSPL3                                                 <-----------GT1   <---------------AtSPL8                                              <---------ARR14(2)          <- >ZmHOX2a(1)                                                           --------->ARR14(2)       ----- -------->AGL15                                                       <------ZmHOX2a(1)         <---- ---------AGL15            <-------MYC3                            <---------HSFB2a(2)       -------- --------->AGL1  --------->YAB1   ----------->HVH21                --------->HSFB2a(2)   --------->ANAC46 --GT1 <-------TEIL        ------->MYC3    ---------->DOF2 <------ZmHOX2a(1) <---------DAG2  --------   atcaagaagtacgttccattcatactacacatggacatgacacatcaaagtgaaaggtttaggacaattctaggattcaccttaggagtaaacacaagga  7084000  Previous    Next  AGI:  At4g11770.1    Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At4g11770 [Arabidopsis Thaliana] (GB:Q9T0E4); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G11750.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 7082273    to: 7083463    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version