Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------AHL20(2)                                             --------->AHL20(2)                                            --------->YAB1                                         <---------ICU4                                        <---------AHL20(2)                                        --------->AHL20(2)                                        <---------ATHB51                                        --------->ICU4              <---------YAB1           --------->AHL20(2)            <---------ICU4         --------->YAB1            --------->YAB1     <---------RVE1(1)                   --------->ANAC58            -------->HAHB4    <---------ARR14(2)                   --------->ANAC46           --------->ICU4     --------->ARR14(3)          --------->YAB1      --------->At5g28300     --------->ARR14(2)       <---------AHL20(2)      <-------GAMYB           <---------ARR11(3)      --------->ICU4     ----------->GT1          --------->ARR11(3)      --------->AHL20(2)                          <-- --------->ETT(2)  <---------AHL20(2)  <---------AHL20(1)<---------YAB1                        <----- -------REM1(1)  ------->TEIL <---------ARR14(3)    ------->TEIL   --------->ANAC58            ------ ->GLK1(2) <---------ATHB12 --------->ANAC58<---------AHL20(2)  <---------ARR14(2)       <----------DOF2 -GLK1(2) <---------TOE2(3) --------->ANAC58--------->AHL20(2)  --------->ARR14(2)<-----------GT1 <--   atgtagacggttaatgatgaatttatctgcaagatattcaaaataattaaaatgtatttattatcaaatacgctagacaagttttctctctctttttcta  7078900                                                                ------>ZmHOX2a(1)             <-----------GT1                             --------->AHL20(2)  --------->AHL20(2)                                   <----------DOF2<---------WOX13(1) -------GLK1(2)          ----------->GT1              --------->TOE2(3)      ---------->DOF2 ----HSFB2a(2)          <---------TOE2(3)           ---------->ID1  --------->ATHB12 --->HSFB2a(2)          <---------TOE1(3)          <-----------GT1 <---------YAB1          --------->AHL20(2) -------ARR11(3)     <---------AHL20(2)         <------------------------ANAC81   --------->ZAT14   gattttaaatcgttttaacaaattttaaggtgaattgtttagtccatatgttttttcctttaattcctcttgattgattcaaagtgttctccattaacta  7079000                                                   <---------ICU4                                                   --------->ATHB51                                                   --------->ATHB12                                 <---------MYB46(3)<--------HAHB4 <---------AHL20(2)       <---------                              <---------ANAC58    <---------YAB1  --------->AHL20(2)   --------->ANAC58                              <---------ANAC58  <---------------AGL15                  ==============                              <---------ANAC46  --------------->AGL15                  --------->TGA1a                              <-----------RAV1(1) --------->ICU4  --------->AHL20(1)   <---------O2                         -------->HAHB4        ----------------->AGL3                  --------->bZIP60(2)                         --------->ATHB12      ----------------->AGL2                  --------->ANAC46                        --------->ICU4         <-----------------AGL2                  --------->O2                        <---------YAB1         <-----------------AGL3     <---------AHL20(2)                      --------->YAB1        <----------DOF2      --------->AHL20(2)    --------->ANAC58         <---------ZAT6<XXXXXXXXXXXXXXXXXXXXXMIR2935        ----------->GT1          <---------ALFIN1   attgtttagtggtgttattgacaaaaatgattgtgtggttctaagactttccattattagatgagaaaaaaattagttaatggagaaccacgtctttaga  7079100                         <---------AHL20(2)                        --------->AHL20(2)                          <---------AHL20(2)         <-----     <---------AHL20(2) <---------AHL20(2)              ------->GAMYB                          <----- -DOF2            --------->YAB1      --------->AHL20(2)----------->HVH21        <----------DOF2  <-- =bZIP_DOF  ----------->GT1  --------------->AtSPL8    <---------MYB52(2)  <-----------GT1--------->AHL20(2)   accaaaatttatggaggtaataagaatttaatctgtacaaaaaaatagacacctctaactgaccttatatatacttgtaacctctttgcacatttattaa  7079200                                                                                                    <                                                                                                   <-                                                                                                   --                                                                          <-----------GT1       -----                                                                     <---------ARR11(3)         <----                                                                     --------->AHL20(2)        ------           ------------>CBF                              <----------DOF2  <<<<<<<<<GT-1        ------ ----AHL20(2)                                     ------------>CBF   <---------AHL20(1)        <----- ------GT1--------->TOE2(3)                      --------->TOE2(3)   --------->AHL20(1)        <----- --------DOF2      <---------YAB1               --------->YAB1<----------ID1              -----------   cttttaaaacatcatcaatttctgattagcaaaaaaaaaaaaaaaaaccatcatcaattctttaacaacaaaatattaaccaaaaaaacatcagcaattt  7079300   --------->YAB1  <---------YAB1 ---------AHL20(2) --------AHL20(2)                          ------>NtERF2 ------->AHL20(2)                         --------->RAP2.6(2)      <---------ANAC58 ---->AHL20(2)                         --------->ANAC46            <---------ANAC58 -----AHL20(2)                      --------->MYB52(1)           <---------YAB1 --->AHL20(2)                     <---------MYB52(2)      <----------DOF2                         <-- --->AHL20(1)                     --------->MYB46(3)    <---------YAB1                         ------ ----AHL20(2)                  <---------WRKY38(1)     <---------ARR11(3)                     <------ ----AHL20(1)                  <---------WRKY12        --------->ARR11(3)                  --------->ICU4 ->CBF    *TSS               <-----------HVH21     <-----------GT1------>ZmHOX2a(2)   <-----------GT1   atttattatagcatacaagatgaagaaacccagtcaactatcggccaccattctaactatctttgtgatccttgctataggtttgtatttacacttatta  7079400            --------->AHL20(2)       --------->AHL20(2)       <---------AHL20(2) --------->TOE2(3) --------->YAB1          --------->ANAC58                                           --------->ANAC55(2) ---------GT1            --------->ANAC58                                     --------->ARR11(3) --->YAB1  --------->AHL20(2)                    --------->AHL20(2)           <---------ARR11(3) ---YAB1   <---------AHL20(2)                    <---------AHL20(2)          <---------CCA1(2) <-----   taaccatattaaaataaataagttgtcaagaaaatgtttttctcttaaaatttaaattcaactatctaatatcaaatctatatctcacttaatatcactt  7079500                                            ------->TEIL                                          --------->ZAT14                                          --------->ZAT18                                          <---------ZAT14               <-----------GT1          --------------->AtSPL8            --------->TOE2(3)          <---------ANAC46          --------->ARR11(3)      --------->CCA1(2)         <---------CCA1(2)       <---------ARR11(3)                     <---------HSFB2a(2)    <----------DOF2        --------->YAB1 <---------ZAT18        --------->AHL20(2)------->TEIL -----DOF2<---------ARR11(3)     --------->ARR11(3) ----------->GT1     --------->HSFB2a(2)      <---   tcaatacttttatatcttaaccttgccaaatataagatatagagtgtacttgttttgttataagacttaaattactggaaccatgtatttttgaaacttc  7079600                                                                          <---------MYB59                                                                     <---------MYB59                                                          --------->AHL20(2)------>MYB83                                                          <---------AHL20(2)------>MYB46(1)                                                      --------->AHL20(2)  --------->TOE2(3)        <---------AHL20(2)                            <---------AHL20(2) ----------------->AG        <---------YAB1                               <---------AHL20(1)  ----------------->AGL1        --------->AHL20(1)             ----------->GT1<---------YAB1 --------->AtMYB61        --------->AHL20(2)         <-----------GT1   --------->AHL20(2) <-----------------AG       --------->AHL20(2)       <---------ICU4       --------->AHL20(1)------>MYB83 --------->DAG2 <-----------GT1            --------->AHL20(2)       <---------AHL20(2)------>MYB46(1)   ----------->GT1 -------DOF2                <---------AHL20(2) ----------->GT1    <-----------GT1  ---------->DOF2   tttatacaattttattgtttccatagttttttaatttttacatgtaaattagtaatataattaaaaaataaccaaacctaattggaaaagtatgtgaata  7079700                                                                                                    -                                                                                                  <--                                                                                                <----                                                                                              <------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                     --------->WRKY38(1)                                   --------->ICU4                                     --------->WRKY12                                      <---------YAB1                                   <---------ICU4                                        ------------                           ------>ZmHOX2a(1)                                             <-----------                          --------->TOE2(3)                                             -------------                    <---------AHL20(1)                                                  <------------                    --------->AHL20(1)                                                  =============                    --------->AHL20(2)    <----------DOF2                               -------------             ----------->GT1      --------->ICU4       --------->MYB52(1)               <------------ <----------DOF2    <---------AHL20(2)<---------WRKY18(1)                 <-------TEIL--------->ANAC46   agtctttggagggaatagcaaatttattccttagtaatgttgacctttgaaaacccataacgagaagagcgtctggtacatgaattagacaccataattg  7079800  Previous    Next  AGI:  At4g11760.1    Description:  LCR17 (Low-molecular-weight cysteine-rich 17). Identical to Low-molecular-weight cysteine-rich protein LCR17 (LCR17) [Arabidopsis Thaliana] (GB:Q9T0E3;GB:Q6GKX9); similar to LCR11 (Low-molecular-weight cysteine-rich 11) [Arabidopsis thaliana] (TAIR:AT4G11485.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 7079310    to: 7080439    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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