Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------------->AGL15                                     <---------------AGL15                                     --------------->AGL15                                    <-----------------AGL3      <---------AtMYB61               -----                                    ----------------->AGL3    <---------ANAC46                  -----                                    ----------------->AGL2  <---------ZAT14                     -----                        <----------DOF2    <---------YAB1   --------->ZAT14                <---------                  <---------ANAC58  <-----------------AGL2 <-----------RAV1(1)          <---------ANAC58                  <---------ANAC58  ==============================MADS_MADS             <---------ANAC46           ------>ZmHOX2a(1)      <-----------GT1 <---------------AGL15                 <---------ANAC58        ------>ZmHOX2a(1) <-----------GT1--------->YAB1    <---------ZAT6      <-----------GT1-------   tcggtctctcctcctgttttcggtgtctttacatttttaccatttatagttgctaattgtagtgttgtggtccatttgaatttgccatttgggtgtcaaa  7055800                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                 <---------WOX13(1)      <----------DOF2                                        --------->ATHB12 <---------YAB1 ---->ANAC46                                            <---------YAB1    <---------ICU4 ---->ANAC58                                          --------->CCA1(2)   --------->ATHB51      ----- ---->ANAC58                                         --------->AHL20(1)  --------->ICU4         ----- --HVH21                                        --------->AHL20(2)       <---------YAB1         ----- --->DOF2               <-----------GT1  ----------->HVH21 ------->TEIL--------->YAB1       ---------   gcaattgacttttggtatggtatgagttacaatgctaaaatgtttgacattgaaatatatgaatgtttgaaaatcataatttgattaatttctaacataa  7055900                                                       --------->AHL20(2) ---->ANAC46                                  <---------AHL20(2)    <---------MYB46(3) ---->ANAC58           --------->ANAC46   <---------AHL20(2)       <--------P ---->ANAC58       --------->AHL20(2)     --------->AHL20(2) <-----------GT1                  <------ >YAB1    ----------->GT1          ----------->GT1     <---------AHL20(2)                     -------   gcaaaaacaaatgagtaaaaaataaacacaatccaatcggataaatatttattcgattaaaatttactggttgtttcatacagttttggttcagtagttc  7056000                                                                                    --------->AHL20(2)                                                                      <---------WRKY45                                                          --------->TOE2(3)       <----------DOF2                                                        ------>MYB46(1)         ------>MYB83                                                       --------->MYB52(1)    --------->DEAR3(2)                                                      --------->TOE2(2)     ------->TEIL                                                      --------->TOE1(2)   ------->GAMYB                                                     --------->DEAR3(2)  <---------MYB52(2)                                                     --------->MYB46(3)  --------->MYB46(3)                                               <------MYB83  --------->AHL20(2) ------>MYB46(1)                                      <---------MYB46(3)------>MYB83  <---------WRKY38(1)                               <---------ZAT6  <------MYB46(1)        <---------WRKY12              <                          <---------ANAC46 <---------ANAC46  <---------AHL20(2)<---------ALFIN1    <- ---ARR11(3)  --------->DAG2 --------->ZAT14  --------->MYB111(1)    --------->WRKY18(1)<---------AHL20(2) -->ARR11(3) ---------->DOF2 <---------ZAT14  --------->MYB46(2)    <-----------HVH21   --------->AHL20(2)   ttcgcaaaaaaaaaaaaaagttttggttcagtagagtgagtagttgagtaggtgaaccaacgtttaaatgggtcaacgaacccactttaaataaatatgg  7056100                                           --------->AHL20(2)                                           <---------AHL20(2)                                    ----------->GT1   <---------ANAC58               <---------ANAC58                                                ---   <---------ANAC58               <---------ANAC58             <---------YAB1                <-------   --------->ANAC55(2)        <----------DOF2               --------->ICU4           ---------->ID1 ---------SPL7               <---------ANAC58               <---------YAB1        ---------->ID1<---- ---------DOF2               <---------ANAC58  --------->AHL20(2)              <----------DOF2  <----   gccttacgttttgtctagcccatatagtatggcttttcttgttaaaaaaataaaaactggtcatgatgcttaatatgacttcttttcgtcttcttctttc  7056200                                                  <------NtERF2                                                 --------->RAP2.6(2)                                                <---------ANAC46                                                <----------ID1                                                <---------DEAR3(1)                                      --------->At4g35610                                      <---------At4g35610                                     --------->ARR14(2)                                     ------->TEIL------>NtERF2                                     <---------ARR11(1)                        <---------ANAC58        <---------ATERF1(2)           --------->DEAR3(1)        <---------ARR14(2)          <---------At4g35610       <---------ARR14(1)      --------->LBD16    <<<<<<<<<TBF1       <---------ANAC46        --------->ATERF1(2)                    --------->AHL20(2) ------->ID1         ----------------------->TaNAC69(2)    <---------HSFB2a(2)         <---------AHL20(2) ---DOF2---------->CDC5 <---------ANAC58        <---------RAP2.6(2)                   <---------AHL20(2) -----ANAC58 ----------->RAV1(2)    <---------CCA1(2)      --------->HSFB2a(2)        --------->AHL20(2) -----ANAC58------>NtERF2 ------>ZmHOX2a(1)    --------->RAP2.6(3)          <---------At4g35610     -   gtcttcttcttcagcgcctgaatgtttcctgtttaaacgtatctgccatggcggcaaaatcccagaaaaccctcgttctgctagcgaatttaatcaagtt  7056300                                                                     --------->YAB1                                                                     --------->TOE2(3)                                                                <---------ATHB12                                                            --------->ANAC58            <----------DOF2             <---------AtLEC2    --------->ANAC58            <---------DAG2         <<<<<<<<<CBP60g      <---------ALFIN1                 ------>ZmHOX2a(1)       ---------->DOF2             <<<<<<<<<SARD1    ------->GAMYB--------->WOX13(1)---------->ID1 ----->ZmHOX2a(1)         <---------GLK1(2)  ------->TEIL   --------->ANAC46 ------>ZmHOX2a(1) <-----   tcctccattaaaagctttttctctcttaaattctccaaatttccatgaatttcaacacacacacgaatcaatctcaatccttcttcgtctccttctctct  7056400                                             ----------->GT1                                             --------->LBD16                                            <---------HSFB2a(2)                                            --------->HSFB2a(2)                                   --------->ANAC55(1)                                   --------->ANAC58                                   --------->ANAC46                                   --------->ANAC58                            <---------------AGL15                            --------------->AGL15                     <---------ATHB12       --------->ANAC46                   --------->WOX13(1)      <---------LBD16                                    -------              --------->ANAC58 --------->HSFB2a(2)                                     --------->ZAT6 ----LBD16    --------->ANAC58 <---------HSFB2a(2)                            ------>ZmHOX2a(1)   gggaacttattctctcacgctcaatcacttcttctacaagtaatctccggaaaaatccactcccaattcttcacatcttcctctctgttacactatttga  7056500                                                      <---------TOE2(2)          --------->TOE2(3)                           <---------TOE1(2)         ----------->GT1                    --------->TOE2(3)         --------->ANAC58                  --------->YAB1         --------->ANAC58                  <---------ICU4   --------->YAB1         <---------ANAC58--------->ICU4       --------->YAB1                     --- --------->GLK1(2)        <---------ANAC58<---------ATHB12     --------->TOE2(3)  --------->WOX13(1) ---->HVH21        ---------->DOF2<---------TOE1(1)  ------>ZmHOX2a(1)          <---------YAB1   ----   cagaatcagaaacgtcaaaaacaaagtttcgtctctacgaggtaatcatcaattcctatgttcaatctcaatccctaaacttatcaatctcttacttcaa  7056600                                                                 <------MYB83                                    <---------ANAC58             <------MYB46(1)                                    <---------ANAC58            --------->MYB59  <---------ATHB12          --------->YAB1------>ZmHOX2a(1)                       <---------MYB46(3)         <---------ATHB51    ------>ZmHOX2a(2)              <---------MYB46(3) --------->WOX13(1) ---->GAMYB             --------->LBD16               <----------DOF2 <---------At4g35610 ----->ANAC46          <---------LBD16 --------->REM1(1)  <-------GAMYB    <----------DOF2   cgaaatggtcgataatggttttgttcctggatcgaattgcttcaactatctcttaactttcgttgttgggtcatcttctttcaatcaatggtggagtttc  7056700  Previous    Next  AGI:  At4g11690.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to EMB2745 (EMBRYO DEFECTIVE 2745) [Arabidopsis thaliana] (TAIR:AT5G39710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21651.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 7056248    to: 7057948    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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