Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ANAC46                                                       <---------HSFB2a(1)                     ------            --------->ANAC58                      --------->ANAC58                             ------            --------->ANAC58                    ---------->DOF2                   <-----------RAV1(2)         <---------REM1(2)                    --------->MYB46(3)                --------->AtMYB61   -         ----------->HVH21        <---------ALFIN1--------->ANAC58      --------->ANAC58    <--------        <-----------TGA1        ----------->RAV1(1)    --------->HSFB2a(1)      <---------ALFIN1 ----        <-----------HVH21  ---------->DOF2  ----------->RAV1(1)         --------->ANAC58    ---------       --------->ANAC46--------->YAB1      <----------ID1    --------->LBD16   --------->ANAC46------   ttaggcttctcgtcacggctaagtatcagaacagcaacaccgatggcaacaaaagcaagattccacaaaatgtcaagaaacaccacaggtttagaatacg  7055200                                        <---------------AGL15                                    --------->ARR14(2)                                 --------->MYB52(1)                                    <---------ARR14(2)                                ----------->TGA1      <----------DOF2           <---------At4g35610                                   ----------->HVH21  <---------ATHB12              --------->At4g35610                        ------>NtERF2       <----- --->ANAC58                  --------->ZAT2                   --------->ANAC58       <-----------HVH21 --->ANAC46                  <---------ZAT2                   --------->ANAC55(1)   <---------ANAC58 -------->WOX13(1)           --------->At4g35610              --------->ANAC55(2)   <---------ANAC58 -ARR14(2)                   <---------At4g35610              --------->ANAC46 -------->P      ------ ----->ANAC46         <---------WOX13(1)--------------->AGL15 --------->ANAC58 --------->MYB52(1) >ARR14(2)---------->ID1   ---------->CDC5              <---------MYB46(3) --------->LBD16    <------ZmHOX2a(1) --->ANAC58        <---------YAB1 <---------MYB46(3)   <---------TOE1(2) <---------LBD16 <---------ANAC46   cccaatcactttgtctctcttctaattgctcagcagcggtttctctaacgagcatcgatggttcacgcatcattctccggctaccagcgtgacggaggaa  7055300                                                                                                    <                                  ------>ZmHOX2a(2)                                 --------->MYB55(2)                                <---------ARR14(2)                                  <---------MYB46(3)                      <---------ANAC46                                        --------->MYB52(1)    -    <---------At4g35610         --------->ARR14(2)                       <---------ANAC58          <- ----ARR14(2)        ---------->ID1                                      <---------ANAC58<------ZmHOX2a(1) --->ARR14(2)  --------->ARR11(3)<------ZmHOX2a(2)<---------GLK1(2) <---------YAB1 --------->ALFIN1<-   cctcgctgcttctcttagaccttgtcgtctagcggatcgatgaattggattggattcttcatctacgcttatggttcttgtaacggtgggaggaagaaat  7055400                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                -----                                                                                               ------           --------->HSFC1(2)                <------MYB46(1)         <-------GAMYB             <-----           --------->HSFB2a(1)               <------MYB83  --------->GLK1(2)                 --------          <---------YAB1                    --------->MYB111(1) <---------GLK1(2)           <--------    <---------ZAT6                          --------->MYB59------->TEIL               <---------MYB46(3) ---------ZAT14               ------>ZmHOX2a(2)         <---------YAB1 <---------MYB46(3)   --------- -------->ZAT14 <---------ANAC58            --------->MYB46(2)<---------YAB1       <---------DEAR3(1) --------ANAC46 <---------ANAC58     --------->TGA1a --------->ICU4 <-----------RAV1(1)<-------GAMYB --------REM1(1)<---------ANAC46     ========================================MYC_MYB <------NtERF2<--   ggtgtagtgtcgatgattccgtcggaatttgatctaccgatgtgagtaggtagagatgatgaatctgattctgttgttgtgttcgtcgtcgttgatgatg  7055500 --------ICU4                                                                                       < ------->YAB1                                                                                       < ------>ICU4                                                                                   <----- ---->YAB1                                 <---------WOX13(1)                                <------- --->ICU4                                <---------ICU4                                    <--------- ----YAB1         <---------ANAC58       --------->ATHB12                            --------->GLK1(2) ->YAB1           <---------ANAC58      <---------YAB1                              <---------ARR11(3) -YAB1            <---------ANAC46   ------>ZmHOX2a(2)                  --------->DAG2     ---------- >ICU4        <---------ANAC58   <---------YAB1                        ---------->DOF2     ---------- -------YAB1  <---------ANAC58 --------->YAB1           <---------TOE2(3)           --------->ARR11(3)   atgatgacattgtgaagcttgtgtgattctcaattttgatcgatgattgccatggattgagatttgttcttaaaaaagggtttggagattttggacgtac  7055600                                                        <---------AHL20(2)                                                        --------->AHL20(2)                                                  <------ZmHOX2a(1)                                            <---------ANAC58                             --------->ZAT14 ----------DOF2                             <---------ANAC58                             --------->ARR14(2) ---------DAG2                              --------->ANAC55(2)                          <---------ARR14(2) --TEIL   --------->DAG2                    <---------ANAC46              --------->HSFC1(2) --SPL7  ---------->DOF2                    <---------ANAC55(2)           <---------HSFC1(2) ------AtSPL8                             <---------DOF5.7(2)           --------->ARR11(3) ----->AtSPL8                  ---------->DOF2   ----------->GT1        <---------ARR11(3) ----->AtSPL3   *TSS     ----------->GT1--------->DOF5.7(2)  <---------TOE2(3) <---------AtLEC2   aactttttcagaaaagtgagagagagagagaaataaagaaacgataacgtgaggaaaattaaaaaggttttggagatgtttccatggtccctatactctc  7055700                                                  --------------->AGL15                                     <---------------AGL15                                     --------------->AGL15                                    ----------------->AGL3      <---------AtMYB61               -----                                    ==============================MADS_MADS                     -----                                    <-----------------AGL3    <---------ANAC46                  -----                        <----------DOF2    <---------YAB1   <---------ZAT14                <---------                  <---------ANAC58  <-----------------AGL2  --------->ZAT14             <---------ANAC58                  <---------ANAC58  ----------------->AGL2 <---------ZAT6               <---------ANAC58           ------>ZmHOX2a(1)      <-----------GT1 <---------------AGL15                 <---------ANAC46        ------>ZmHOX2a(1) <-----------GT1--------->YAB1    <-----------RAV1(1) <-----------GT1-------   tcggtctctcctcctgttttcggtgtctttacatttttaccatttatagttgctaattgtagtgttgtggtccatttgaatttgccatttgggtgtcaaa  7055800                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                 <---------WOX13(1)      <----------DOF2                                        --------->ATHB12 <---------YAB1 ---->ANAC58                                            <---------YAB1    <---------ICU4 ---->ANAC46                                          --------->CCA1(2)   --------->ATHB51      ----- ---->ANAC58                                         --------->AHL20(1)  <---------YAB1         ----- --HVH21                                        --------->AHL20(2)       --------->ICU4         ----- --->DOF2               <-----------GT1  ----------->HVH21 ------->TEIL--------->YAB1       ---------   gcaattgacttttggtatggtatgagttacaatgctaaaatgtttgacattgaaatatatgaatgtttgaaaatcataatttgattaatttctaacataa  7055900                                                       --------->AHL20(2) ---->ANAC58                                  <---------AHL20(2)    <---------MYB46(3) ---->ANAC46           --------->ANAC46   --------->AHL20(2)       <--------P ---->ANAC58       --------->AHL20(2)     <---------AHL20(2) <-----------GT1                  ------- >YAB1    ----------->GT1          ----------->GT1     <---------AHL20(2)                     <------   gcaaaaacaaatgagtaaaaaataaacacaatccaatcggataaatatttattcgattaaaatttactggttgtttcatacagttttggttcagtagttc  7056000                                                                                    --------->AHL20(2)                                                                      <---------WRKY12                                                          --------->TOE2(3)       <----------DOF2                                                        ------>MYB46(1)         ------>MYB83                                                       --------->MYB52(1)    --------->DEAR3(2)                                                      --------->TOE2(2)     ------->TEIL                                                      --------->TOE1(2)   ------->GAMYB                                                     --------->MYB46(3)  --------->MYB46(3)                                                     --------->DEAR3(2)  <---------MYB52(2)                                               <------MYB46(1)        <---------WRKY38(1)                                      <---------MYB46(3)------>MYB83  <---------WRKY45                               <---------ZAT6  <------MYB83  <---------AHL20(2) ------>MYB46(1)     <                          <---------ANAC46 <---------ANAC46  --------->AHL20(2)<---------ALFIN1    <- -->ARR11(3)  --------->DAG2 <---------ZAT14  --------->MYB111(1)    --------->WRKY18(1)--------->AHL20(2) ---ARR11(3) ---------->DOF2 --------->ZAT14  --------->MYB46(2)    <-----------HVH21   <---------AHL20(2)   ttcgcaaaaaaaaaaaaaagttttggttcagtagagtgagtagttgagtaggtgaaccaacgtttaaatgggtcaacgaacccactttaaataaatatgg  7056100  Previous    Next  AGI:  At4g11680.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to E3 ubiquitin-protein ligase At4g11680 [Arabidopsis Thaliana] (GB:Q93Z92;GB:Q9T0D5); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G63170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63689.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7053437    to: 7055616    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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