Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                               --------->REM1(2)                                                  <--              <-----------GT1  --------->ZAT14      --------------->AGL15                         --- -------At4g35610     --------->TOE2(3)--------->TOE1(3)                               --------->AHL20(2) ------>At4g35610     --------->TOE1(3)--------->TOE2(3)             --------->ANAC58  <---------AHL20(2) >MYB52(1)   <-----------GT1   <---------ZAT14--------->TOE2(3)      --------->ANAC58 --------->AHL20(2) -ID1     <---------DAG2 --------->MYB52(1)  --------->YAB1   <---------GLK1(1) <-----------GT1   <--   agcagagagccaatttttccattaccctaactgtgtagaaaccttaatcgtcaacaaaatttagaaatcagacgaaaacaattcacaaatttataaacta  7052700                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                              <------                                                                                              -------                                                                                             --------        --------->At4g35610                                                                  <-------      --------->DAG2                                                                       --------->LBD16     ---------->DOF2                                                                     <---------LBD16 -------->ALFIN1                                                                        --------->MYB52(1) -------ZAT6                                                 <------ZmHOX2a(1)    <---------ARR14(2) ------>ALFIN1                                         <---------TOE2(3)          --------->ARR14(2) -------ANAC46        --------->AHL20(2)              --------->MYB52(1)      --------->At4g35610<---   gtgtgggaaaagctgagaaaaccattaaacacttgtgcaaactcagagatagatactaacgaaggatggattattttctcagcgtaaactcaccggattt  7052800     --------->TOE2(3)     >>>>>>>>>RAP2.2 --------ANAC55(2) ------->ANAC55(2) ------->ANAC46 ------->ANAC55(1)                                                                               ---- ------->ANAC58                                                                             ------>MYB83 ------->ANAC58                                                                           <---------MYB46(2) -------LBD16                                                                       <----------DOF2 ---GLK1(1)                                    ---------->DOF2  ----------------->AGL2    <---------MYB59 -->GLK1(1)                                 <------NtERF2       ----------------->AGL1 <-----------GT1 ->ARR14(2)                                --------->LBD16    --------->ARR14(2) --------->ARR11(3) --ARR14(2)--------->YAB1                <---------LBD16--------->ALFIN1       ------->TEIL ------>MYB46(1) --------GT1                            --------->At4g35610   <---------ARR14(2) <---------ARR11(3)   cacgcaatctaaaacataatcggcactgagagcatccaaatcagccggagaaagagaagtaggggaaccagaaggggaacgaagctcttttaccaaaccc  7052900                                     --------->LBD16                                --------->KAN4(2)                               ------>ZmHOX2a(2)                               --------->HSFC1(2)                               <---------HSFB2a(1)                               --------->HSFB2a(1)                               <---------MYB46(3)                              <------ZmHOX2a(2)                          <------NtERF2----------->HVH21                          ------>NtERF2--------->ARR14(2)                         <---------RAP2.3(1)                         --------->LBD16---------->DOF2                                 --------->ANAC58                        <---------RAP2.3(2)                                             ----------->GT1                        <---------DEAR3(1)      ----------->RAV1(1)                     --------->ANAC58                    <---------ANAC58<---------HSFB2a(2) --------->GLK1(2)               <----------ID1                    <---------ANAC58--------->HSFB2a(2) <---------ARR14(2)           --------->ARR14(2)                   --------->At4g35610<---------MYB52(1)--------->ARR14(2)          <------ZmHOX2a(1)      --------->ANAC58  <---------ANAC46<---------DOF5.7(2)                 XXXXXXXXXXXXXXXXXXXX>MIR832-5P      --------->ANAC58 <---------LBD16--------->DOF5.7(2)      <----------DOF2 --------->GLK1(2) ----->LBD16       --------->ZAT2  <---------LBD16 ------->GAMYB          <---------MYB52(1)   gaagacataagaaactccatgagcttgcggcgatcgttccggtaacgctgcaacagagaatccatctttgactcccgttagaatcaggaaacgaaaaaat  7053000                                                                                 <---------ZAT18                                                                       ------->TEIL                                                --------->At4g35610  <---------ZAT14             ----------->GT1        >>>>>>>>>TBF1                    <---------ZAT18             <---------ANAC46   <------ZmHOX2a(1)         <----------DOF2<----------DOF2   --------->WRKY12           --------->LBD16--------->At4g35610     --------->ZAT18   ----------->HVH21         <---------LBD16 <---------ZAT2       <---------ANAC58         --------->AtLEC2 --------->At4g35610     --------->GLK1(1)   --------->ZAT2       <---------ANAC58   *TSS<---------AtLEC2 <---------At4g35610     <---------GLK1(1)   <---------At4g35610  <---------ANAC46  <---------ALFIN1   cgcctctgacctagagcgtataatttgaaatccaggaagaagaatggagctgcagagaggctttttcagcgtgtactttgttgtcccctctccatggaag  7053100                                                                                     <----------DOF2                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 --------->ARR11(3)                                                                                 <---------GLK1(2)                                                                                 <---------ARR14(2)                                          ------->PIF5                           --------->ARR14(2)                                          <-------PIF5                           <---------ARR11(3)                                    --------->DAG2                             ----------->ARR10                                   ---------->DOF2                      --------->TOE1(3)    --------                               --------->LBD16           ---------->DOF2--------->TOE2(3)--------->YAB1                             <---------LBD16          --------->At4g35610    ---------->DOF2<--------          <----------DOF2    --------->ZAT18 <------ZmHOX2a(1)       <-----------GT1 ------>ZmHOX2a(1)   aaggtgagagagctttgggtttagggggaagcgcggaaaaagcacgaggactgatcagcaaaagaccaaaataaccttagaaagatccttttcatattct  7053200                                                                         <---------AHL20(2)                                                               --------->ANAC58                                                               --------->ANAC46      <---------TOE2(3)                                                               --------->ANAC58      <---------TOE1(3)                                                              <---------LBD16       <---------DOF5.7(2)     <---------At4g35610                                    --------->MYB46(3)  ------>ZmHOX2a(1)    --------->GLK1(2)              ------>ZmHOX2a(1)      --------->MYB52(1)<-----------GT1    ------->TEIL     <----------DOF2                   --------->YAB1   <---------AHL20(1)  <-------- ->GLK1(2)      <----------DOF2   --------->TOE2(3)--------->ATHB12     --------->AHL20(2)  <-------- -GLK1(2)  <----------DOF2  <--------P            <---------ATHB12      <---------AHL20(2)  <--------   gacatgaatctgacttttcttttctttttggtaagtccttaaatgtttttgaatcattcgtaacgacggaacaattaatttcctgttaacgatgtcgttt  7053300                                                                                                   <-                                                                                                 ----                                <---------TOE2(3)                                               <----                                <---------TOE1(3)                                             <------                         <---------ANAC58                                                    <-------                   <---------AHL20(2)                                                        --------                  --------->AHL20(2)                                                    --------->WRKY12    <---------ANAC58     <---------ANAC58                                               ----------->HVH21    <---------ANAC58   <---------AHL20(2)           <---------MYB52(1)                  --------->WRKY38(1)  --------->ARR11(3)   --------->ARR11(3)   ---------->DOF2                            <-----------HVH21 -ANAC46        <----------DOF2<---------DOF5.7(2)<---------HSFB2a(1)            <---------YAB1------ -ANAC58        ------>ZmHOX2a(1)      <---------ANAC46           ----------->HVH21  ------>ZmHOX2a(2) -ANAC58 <--------P--------->AHL20(2)  ----------->GT1--------->MYB52(2)     <----------DOF2<--------   tgaatttcttggtaagtccttttaatttcttgttaacgatgtcgttaaaagaacgtttgttttatactgtgaccattttctttgtgatcggtgaccgcgc  7053400                     ------>NtERF2                    --------->ANAC46                    --------->ANAC58 --------MYB52(1)   --------->ANAC58      --------->AHL20(1) ----->DEAR3(1)   <---------ALFIN1        <---------ARR11(3) --NtERF2      <---------WRKY18(1)        <---------AHL20(1)                                     <--- ---DEAR3(1)  --------->WRKY38(1)        --------->CCA1(1)                                       <--- --ABI4(2)    --------->WRKY12           --------->RVE1(1)   --------->AHL20(2)                  ---- ->ZAT18   <---------ICU4     <---------YAB1           ----------->GT1                           ---- >NtERF2  <---------YAB1<---------DEAR3(2)--------->ARR11(3) <---------AHL20(2)        <---------MYB52(1) -ATERF1(1)--------->ATHB12 <-----------GT1  <----------DOF2--------->ICU4    ---------->DOF2   -----   cgattgtttctgatcattgaccacgccggtttacgattttcaaatatctttttgattttgtaattaataaacgagaaacacaaagctcagttgtttccac  7053500        --------->ANAC58        --------->ANAC58   --------->ANAC46 <---------ALFIN1                                                                              <----- ----MYC3                     <------ZmHOX2a(1)                              --------->ANAC58 <------ZmHOX2a(2) ----MYC2               --------->DAG2              ------>ZmHOX2a(1)     ----------->HVH21  -------- --->MYC2              ---------->DOF2       --------->AHL20(2)         <----------DOF2      <------- --->MYC3      --------->AHL20(2)        <---------ATHB12             <-------TEIL  <---------YAB1<-- ---->ANAC46   <---------AHL20(2)     --------->TOE1(2)      <---------YAB1  --------->ANAC58<-------   gttccacaccaagaaaattaaaaaataaagtaggactaatccaacgatttattcctacatactatcaataggcgcattgacgcattgtaatagaagatca  7053600  Previous    Next  AGI:  At4g11670.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63688.1); contains InterPro domain Munc13 homology 2 (InterPro:IPR014772); contains InterPro domain Protein of unknown function DUF810 (InterPro:IPR008528); contains InterPro domain Munc13 homology 1 (InterPro:IPR014770) Range:  from: 7044238    to: 7053085    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g11680.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to E3 ubiquitin-protein ligase At4g11680 [Arabidopsis Thaliana] (GB:Q93Z92;GB:Q9T0D5); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G63170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63689.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7053437    to: 7055616    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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