Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------AHL20(2)                                                                                <---------ARR11(3)       --------->CCA1(2)                                                        <---------AHL20(1)      <---------ARR11(3)                                                        --------->AHL20(2)      --------->ARR11(3)                                                       --------->AHL20(2)    <---------TOE2(3)          <-------GAMYB--------->ARR11(3)        --------->ANAC58 ----------DOF2               --------->MYB111(2)                     --------->ANAC58 --------GT1                  --------->MYB52(2)                    <---------ALFIN1     <----------DOF2 ->AHL20(1)                   <---------MYB46(3)                ------>NtERF2--------->AHL20(2)     - --AHL20(1)                   --------->MYB55(2)             --------->At4g35610--------->ARR11(3)  - -AHL20(2)                 ------------>MYB.PH3(2)           <---------At4g35610--------->AHL20(1)<--   tactttaagatatgtctctatgtctgaatagtttgttggcagtattgatattgaattcaatttggctgcctcactccaaaaatatattgttctttcgact  7038200        --------->At4g35610     --------->At4g35610                                                    <---------ARR11(3)   <---------ICU4                            --------->ZAT6                 --------->ARR14(2)   --------->YAB1                          <---------ARR11(3)   <---------AHL20(1)                 <-  <---------ATHB12                        <---------ICU4        <---------AHL20(2)               <--- -------->YAB1                           --------->ICU4         --------->AHL20(1)             ------ -------->WOX13(1)                       <---------YAB1        --------->YAB1--------->CCA1(2) <----- -------YAB1                           --------->YAB1<-----------GT1        --------->ARR11(3) ------   attaatcatcagccaaaacaacattgtctcgatactgtttctcatgatcactaattcactatgtattatattgatcaagatatacaaaaatatgaactgc  7038300                                                                             <--------HAHB4                                                                             <---------ICU4                                                               >>>>>>>>>>GT-3b <---------YAB1                       <---------ZAT18                      ----------->GT1  -------->ATHB1                       --------->ZAT18                    ---------->DOF2    --------->ATHB51 --------ANAC46      <-------MYC3                  <---------WRKY45          --------->ATHB12 ------ANAC46--------->YAB1                        <---------WRKY38(1)      --------->ICU4       ---- --->ZAT2    <---------ICU4                        <---------WRKY12      <------ZmHOX2a(1)      <---- ----ZAT2   <---------ATHB12                      <<<<<<<<<<WRKY6 <---------AHL20(1)        --------- --->At4g35610       ------->MYC3                 <<<<<<<<<<WRKY11--------->AHL20(1)        ---------   tgggtatagtttcaattatcccatgtggacttcattttgcaagagaaatttagtcaactagaaagaaaaatattaggaattattagtcatacaaccatat  7038400                                                                                  --------->ANAC58                                                                                  -------->P                                                                              --------->ANAC46          <---------ANAC58                                                    --------->ANAC58 ------    <---------YAB1                                                            --------->ANAC58 <----- <---------TOE2(3)                                                          ---------->DOF2   <------ ----->YAB1 --------->ALFIN1           --------->MYB46(3)           ------>ZmHOX2a(1) ------>MYB46(1) -----YAB1<---------bZIP60(2)          <------------MYB.PH3(2)     --------->TOE2(3)  ------>MYB83 >TOE2(3) <---------ANAC58 <---------ZAT14                         --------->TOE1(3)------->GAMYB --- >YAB1    <---------ANAC46 --------->ZAT14  <----------DOF2      --------->ICU4   --------->ANAC58<--   tataagattataacgtggaagaaaaactgtatagagttctaacaaactttcggtgaaacttcatgtcatccttaattcaaaagcaacccactagtcaaat  7038500                                                                --------->ZAT6            --------->HSFB2a(2)                                 <---------HSFB2a(1)         <----------DOF2                                   <---------HSFB2a(2)      --------->ARR11(3)                             --------->YAB1      <---------ARR11(3)                             -------->ATHB1     <---------CCA1(2)                               <---------AHL20(2)                <---------ARR11(3)    <---------AHL20(2)                               --------->ATHB51     <---------AHL20(2)    <---------ARR11(3)                               <---------ICU4      --------->AHL20(1)    --------->AHL20(1)                               <--------HAHB4      <---------AHL20(1)    <---------AHL20(1)                               --------->AHL20(2)  --------->AHL20(2)    --------->ARR11(3)                              <---------ATHB12     <---------AHL20(2)      <--- --->ARR11(3)                                       --------->ICU4<<<<<<<<<TAC1        --------->ARR11(3) ----ARR11(1)                                   ------------>CBF<---------ALFIN1 <---------YAB1 <---- ---CCA1(2) <---------HSFB2a(2)          --------->WOX13(1)--------->HSFB2a(2) *TSS---------->DOF2 ------>TOE2(3)                        ------------>CBF<---------YAB1    <---------ARR11(3)     ----- --------DOF2                         ------->TEIL  <---------ATHB51     --------->ARR11(3) ---------   ctttaatatatctttcagaaaacaagacttcacatatatgaatcaatctcttcaattatttttggaacactcgaatatatttgatgaaagagcttaaaga  7038600                                                        <---------CCA1(2)                                                    <---------O2                                                    --------->O2                                                    <---------At4g35610                                                    <---------TGA1a                                                    --------->At4g35610                                                    <---------ANAC55(2)                             <                                                    ----------->RAV1(2)                             <                                                    --------->ANAC55(2)                            <-                                                    =====================MYC_MYB                   --                                                    ==================================bZIP_DOF     <-                                                  <---------ALFIN1         --------------------->WRI1                                                 ----------->HVH21         <----------DOF2         <-                                                 <------NtERF2          ------>NtERF2             ---                                                 --------->ATERF1(1)   --------->DEAR3(1)         ---                                                <-----------TGA1      --------->ATERF1(1)        ----                                                ------>NtERF2         --------->RAP2.3(1)    --------                                                <---------ATERF1(1)   <------NtERF2          --------                                                <-----------HVH21    <---------ATERF1(1)    ---------                                               --------->bZIP60(2)  --------->ANAC58        <--------                                               <---------bZIP60(1)  --------->ANAC58       <---------                                             =================MYC_MYB------>NtERF2         --------->LBD16        <---------ZAT6                       ------->GAMYB       ------->GAMYB            --------->ANAC55(2) ---ZmHOX2a(2)                             <---------At5g28300  --------->MYB46(3)        --------->ANAC46 -----ARR11(3)              --------->At4g35610--------->bZIP60(1)  --------->ANAC46      <---------ANAC55(2) ---->ARR11(3)            --------->ATHB12--------->MYB52(1)   <---------At4g35610       <---------LBD16 ->DOF2 --------->ICU4   <---------YAB1  ----------->HVH21     --------->At4g35610  -----------------   tcacgttgtagtgatcacttatggaccatcatcggaggcttcagtaacggcgtcacctgtctctcaacagacgccgtctttgtttgcatactccgtaacg  7038700   <---------At4g35610   --------->At4g35610 ------NtERF2 ---------MYB52(1) ----------HVH21 ---->NtERF2 ----------TGA1 --------SPL7 ------>RAP2.3(3)    --------->ANAC46 ------>DEAR3(1)   --------->MYB52(1)                                                             <-- ----->RAP2.3(1)  ----------->HVH21                       --------->LBD16                        <--- -->DOF2        <---------At4g35610                     <---------LBD16                          <--- ->SPL7         <---------ZAT2  <---------DEAR3(2)<------MYB46(1)                             <------ -->HVH21       --------->ZAT2  <---------MYB46(3)<------MYB83                              <-------- -MYB52(1)      --------->At4g35610<-------TEIL  <---------AtMYB61                 <---------ANAC58 --HVH21 <---------YAB1   --------->ANAC58       --------->MYB59                   <---------ANAC58<- ---->WRI1   <-------TEIL --------->ANAC58     <---------MYB52(1)     <---------TOE2(3)   <---------At4g35610   ccgtcagcatcaagattcagctcacggcgagcatcggttcatgttatcggtttggttctccggtttataactatggttctatgtttcgtctctgctcttt  7038800                                                                                  --------->ANAC58                                                                       <---------ZAT14     --------->At5g28300                                              ------>ZmHOX2a(1)            <- -----GAMYB                                       ------>ZmHOX2a(1)  --------->TOE1(3)          ----- ------ANAC58     ------->GAMYB   --------->At4g35610               ----------->RAV1(2)         <---- ------ANAC58   <---------At4g35610      --------->ANAC46         <---------ARR14(2)            ----- ----DOF2     <---------WRKY12    ----------->RAV1(2)             --------->ARR14(2)          ------- --DOF2       <---------WRKY38(1) <---------At4g35610             --------->ARR11(3)     ---------->DOF2 --------MYB52(1)--------->MYB46(3) ----------->HVH21            <---------CCA1(2)--------->ANAC58<--   cgttggcagtgaatgttcaacggccttcgaagagacatctgacacaaaactcctcgagttttgcttcatatcctgaactgttgtaagaaactaaagaacc  7038900                                                                            <---------TOE2(3)            --------->ATHB12                                                <---------YAB1       --------->AHL20(2)                                               <---------GLK1(2)     --------->TOE2(3)                                            <---------ARR14(2)     <----------DOF2            <---------AHL20(2)                --------->GLK1(2) --------ARR11(3)            <---------AHL20(2)                   --------->ARR14(2) ---->TOE1(3)                --------->AHL20(1)              --------->ANAC58 -----DAG2 <---------AHL20(2)<---------AHL20(1)              --------->ANAC46                    ---- ---->TOE2(3)          --------->YAB1                        --------->AtLEC2                  ------ >TEIL <---------AHL20(2)    --------->AHL20(2)              --------->ANAC58                 ------- -------CCA1(2)       --------->ZAT6              ----------->GT1<---------GLK1(1) <---------ZAT18   ttatcttctttaattcattgtttaatactaatattttatatagaatatgatgttgttatttccaagcaaatctggattatcgttgttcacttactaaaat  7039000                                                                              ------->TEIL                                                                       --------->CCA1(2)                                                                   <---------TOE2(3)                                           --------->ATHB12       ---------->DOF2                                 --------->AHL20(2)              --------->AHL20(2)     --------->ARR14(2)          <---------AHL20(2)              <---------AHL20(2)     <---------ARR14(2)          --------->AHL20(1)          --------->AHL20(2)        --------->YAB1 ----->YAB1                 --------->AHL20(2)       <---------GLK1(1)--------->ARR11(3) --->AHL20(2)         ------------------------>ANAC81--------->GLK1(1)<---------ARR11(3) -->YAB1           ---------->DOF2        --------->ICU4     <---------AHL20(2) ----------->GT1    --   aataagggatacttgaaaaaaaaaagtctaaaaaataaaatgaaaagattggctgatttctgttaaattaaagatatatgaaccgaaaattgtaatggaa  7039100  Previous    Next  AGI:  At4g11655.1    Description:  transmembrane protein, putative. Identical to UPF0497 membrane protein At4g11655 [Arabidopsis Thaliana] (GB:Q3EA54); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82263.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 7038579    to: 7039917    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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