Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->ANAC46 -------->AtMYB61                                                                                  <- ---------ALFIN1                                                                                ----- ------->MYB46(3)                              <---------ARR11(3)                         --------->YAB1 ------ALFIN1                                  --------->ARR11(3)                       --------->ARR14(2) ----->ANAC46                                 <---------CCA1(2)                         <-----------ARR10 ----->AtMYB61              ------>MYB46(1) --------->YAB1                <----------DOF2 --------->TOE2(3) ---->MYB46(3)              ------>MYB83 <-----------GT1               <-----------GT1  <---------ARR11(1) -->YAB1                  --------->TOE1(2)<---------YAB1             <---------CCA1(2) <---------ARR11(3) --ATHB12          --------->YAB1      <---------AHL20(2)          <----------DOF2     <---------CCA1(2) ->MYB46(3)    <---------AHL20(2)   ------->TEIL          <---------TOE2(3)   --------->YAB1  <------   caccactcgacctctatataaacataaacctagcaatgtatttttatcatatctcagattaagttttctcttttatctttttataacccaaatcttaata  6938300                                                                                                    <                                                                                                    <                             ------>MYB46(1)                   <---------ANAC58           --------->AHL20(2)             --------->ARR11(3)                                <---------AtLEC2           <---------AHL20(2)  ------->GAMYB    <-----------GT1                         <---------ANAC58               --------->AHL20(1) ----------GT1  ----------->GT1--------->AHL20(2)<---------MYB46(3)  <----------DOF2     --------->AHL20(2) ---->YAB1 <---------YAB1------------------------>ANAC81   <---------ANAC58      ------>ZmHOX2a(2) <- ---YAB1   <---------TOE2(3) ------>MYB83  <<<<<<<<<<<<<<<<<LFY<---------ANAC58<---------ARR11(3)  <-   ttaaccccagattaagatttgttacaaaaccaaataaacaaaaacagacaatggttcaagtgcttgcatgtcttttccattgatctcaaaaaaaaattgt  6938400                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                               <---------GLK1(1)                                            <------NtERF2              ----------->TBP                                           --------->LBD16           <----------DOF2    <---------ANAC58                            --------->HSFB2a(2)                  <---------ANAC58       <---------ANAC58 ----------DOF2             <---------HSFB2a(2)                  <---------ANAC46   ------>ZmHOX2a(1) ---------DAG2      <-----------HVH21     <---------ANAC46       <---------ANAC58   <----------DOF2 - --------DAG2 <---------AHL20(2)         <---------LBD16        <------NtERF2  --------->GLK1(1) ---- ---------DOF2--------->AHL20(2)   ------------>CBF        --------->DAG2      <---------CCA1(2) ====   gcctttttgtcagtatttattttgtcacttctgtaacaacaatggcggagtttaaacccataaggtggcttctttaaaaacatatccttttcgcgtctgc  6938500           ----------->GT1          --------->LBD16         <-----------RAV1(2)    ------------>CBF                       <---------MYB52(1)         ===============================RAV                          --------->TOE2(3)   --------->GLK1(1)          --------->REM1(1)                    ------>MYB46(1)   <---------GLK1(1)          --------->MYB46(3)                   ------>MYB83 ------>GAMYB        <------------CBF                    ----------->TBP                          --- ------->RAV1(1)  ------------>CBF           --------->AHL20(2)    -------->P                    <--- ====================RAV    ----------->RAV1(1)        <----------DOF2<----------DOF2           -----   aacagaaatctccaggtaaaaccaattgagcaacaacaattcgataaaaaaatcagactttaaaaatccaacctttaggctaatccatgtttgtttgttt  6938600                                                 ---------->DOF2                           --------->DAG2      <---------ANAC58                       <------------CBF             ------------>CBF---------->DOF2      <---------ANAC46                  <---------TOE2(2)          --------->ATHB12   <---------TOE1(3)      <---------ANAC58<------------CBF  <---------TOE1(3)       <---------ANAC58      <---------TOE2(3)   <---------CCA1(2)<---------YAB1      <---------TOE2(3)       <---------ANAC58  <------------CBF ------->ID1   <-----------GT1       <---------ANAC46        <----------DOF2   --------->AHL20(2) ------WRKY18(1) --------->ZAT6      <---------ANAC58     <---------ARR11(3)   --------->YAB1 ------>HVH21 --------->AHL20(2)     <---------ANAC58     --------->ARR11(3)  <---------ATHB12-------   gacccatttcttgaaattaactctaattgtatttgtttggcttaggttattgaaagaagagacctttcttgattagagcaatgaaattgaggtaaagggt  6938700                       -------->HAHB4                       --------->YAB1                    <---------ANAC55(2)                      <---------YAB1                     <---------TOE2(3)              <------ZmHOX2a(1)                     <---------TOE2(3)       <---------TOE2(3)               <------ZmHOX2a(1)       <------ZmHOX2a(1)                <-----------RAV1(1)        <---------YAB1     <---------TOE2(3) ---->GT1           --------->YAB1 <-------TEIL    <---------TOE2(3)  ------->TEIL    <---------TOE1(3)   ttaatggcaggatgggaagttttaatgatacttcatgttcatatgttgatgttgagattaagtatgttgatgaatgtgaggagaggttaaggagattgtt  6938800                   <---------ANAC58                   <---------ANAC58            <---------MYB46(3)         ---------->DOF2            <------MYB83 <------ZmHOX2a(1)            <------MYB46(1)         <---------ZAT6        <-----------RAV1(1)       ----------->GT1   <---------ZAT14                       <---------At4g35610      <----------DOF2  <---------TOE2(3)            --------->ZAT14            --------->ATHB12   tgatcaagctttgttggtttttcttgaggaagagggtagtataaagcctctccctgcagttataggtgatggcaaaaatgttgatttgtttaagctgttt  6938900                                                <---------ANAC46                    <---------ZAT14                                              <---------MYB46(3)                    --------->ZAT18                                              --------->ALFIN1                      --------->ZAT14                                             --------->ALFIN1                   <---------WOX13(1)                                          --------->DAG2                       >>>>>>>>>ARR2                                        ---------->DOF2                    <----------DOF2                                      <------ZmHOX2a(1)                --------->MYB59                                   --------->HSFB2a(2)       <---------ANAC46 --------->ATHB12                                   <---------HSFB2a(2)     <---------MYB46(3)<---------YAB1       <--   gtattggtgagggagagggaagggtttgatactgtgtctaggaaaaggttgtgggaagtagtggctgagaagttaggctttgattgttcactggttcctt  6939000                                                              >>>>>>>>>ARR2                                                       --------->GLK1(2)                                                     <------ZmHOX2a(1)                                                <---------AtMYB61                                                --------->ALFIN1                                               --------->ATERF1(1)                                               <------NtERF2  >>>>>>>>>ARR1                                               <-------GAMYB  >>>>>>>>>ARR1                                              <---------MYB46(3)                                              <---------DEAR3(2)                      ----------->GT1                                              <---------ORA47(2)                   <------ZmHOX2a(1)             <---------ANAC58                 <---------ANAC46>>>>>>>>>ARR2        --------->YAB1           <---------AHL20(2)                <---------DEAR3(1)                  <---------TOE2(3)         <---------WOX13(1)                  <---------DREB2C(2)----------->GT1 <---------ICU4       --------->ATHB12                --------->CCA1(2) --------->TOE1(2)   --------->YAB1---------- --------->YAB1             <---------LBD16 <---------ABI4(1)<------ZmHOX2a(1)  --------->YAB1 ------ --------DOF2<---------ANAC58     ----------->GT1<---------MYB46(3)      ----------->GT1<---------ZAT6   ctttgatattgatttacttgaagtatttgaaccggatggagaaatgggcggtggaggaatctaggattgtgaattgggataataaggatagtgaaaagaa  6939100                                                                                                    <                                                                                               <-----                                                                                              <------MYB83                                                                                           <---------MYB52(1)                                                                                      <---------MYB52(1)                                                                                    <-----------RAV1(1)                                                                                    <---------MYB46(3)                                                <-------GAMYB               --------->MYB52(1)<------                                               <---------MYB46(3)        --------->ANAC55(1)  <------MYB46(1)                   <---------ANAC58            --------->MYB111(2)       <---------ANAC55(2) <-------                   <---------AtLEC2            --------->MYB52(2)        --------->ANAC55(2)<--------                   <---------ANAC58            <-----------RAV1(1)       --------->ANAC58<---------ANAC46  <-------GAMYB    <---------ANAC46            --------->MYB55(2)        --------->ANAC46<---------ANAC58 >DOF2   <---------ZAT6    --------->MYB59  ------------>MYB.PH3(2)      --------->ANAC58<---------ANAC58 ---->DOF2    <-----------RAV1(1) ----------->GT1                <-----------HVH21<---------At4g35610   agggtgttatagtggtatgttgcatgagttagggaatggttttaagagtttgttggacaatgggaagtgtcagaaacgtaacagagctgttgcgtttggt  6939200  Previous    Next  AGI:  At4g11400.1    Description:  ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein / Myb-like DNA-binding domain-containing protein. similar to ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39684.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain AT-rich interaction region; (InterPro:IPR001606); contains InterPro domain ELM2 (InterPro:IPR000949) Range:  from: 6938712    to: 6940534    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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