Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <------MYB46(1)                                                        <------MYB83                                                        ----------->GT1                                                       <---------TOE2(3)                                                       --------->MYB59                                                ----------------->AGL1                                                =====================================================                                                ----------------->AG                        ---------                                                ----------------->AGL2                    <---------ANAC55(2)                                                <-----------------AGL2                    --------->ANAC55(2)                                                <-----------------AG                  <-----------GT1                                                <-----------------AGL3            <--------HAHB4                                            <---------ANAC58                      <---------ICU4                                            <---------ANAC55(2)                   --------->YAB1                                            --------->ANAC55(2)                   --------->ATHB51     <---------AHL20(2)                     <---------ANAC58                      <--------ATHB1     --------->AHL20(2)                  <---------MYB52(1)                      <---------ATHB12   - ----STY1(2)                  --------->HSFB2a(2)--------------->AGL15           <---------ATHB51 --- --->STY1(2)                  <---------HSFC1(1)<-----------------AGL1           --------->AHL20(2)-- -->ANAC58                    <---------HSFB2a(2)<---------------AGL15           --------->ICU4<----- -->ANAC58                    --------->HSFC1(1)----------------->AGL3 <---------GLK1(2)--------->ZAT6   aagtgattttaatctgattttgtataatgcttctggaaactcagttacgttccaaattaggttatattccaccgattttgtcaataattaacacttgaca  6901300                                               <---------ATHB12                                               --------->ICU4                                            --------->TGA2(2)                                          <---------bZIP60(1)                                          --------->bZIP60(1)                                  ------                                          <---------TGA2(1)                            <-----------HVH21                                          --------->ANAC55(2)                        --------->LBD16       ----------->GT1                    --------->TGA2(1)                         <---------ANAC58     ---------->DOF2                      <---------ANAC46                     ====================== ==========MADS_MADS                      <---------ANAC55(2)           --------->ANAC58  --------->PCF2 -->HVH21           --------->ALFIN1     <-----------------------TaNAC69(2)    ------>ZmHOX2a(2) --------->DOF2---------->DOF2           ----------->STF1               <---------O2<---------ANAC58 --------------------->ANAC81           <---------TGA2(2)               <---------ANAC55(2)  <------- ------->AHL20(2)   ----------->GT1    ----------->TGA1            ----------->HVH21<---------ANAC46- ----------AGL15 --------->DAG2      <---------ICU4    --------->YAB1   --------->ANAC58----------->HVH21   aataaagaaaagaaaaaaaaaggtgtgaaatcgttttagtaatgacgtaatcactaatcagagcaaaacttgacacgtagatcgctccgtgtgacccacg  6901400                        <---------DAG2                        <----------DOF2                    --------->ZAT18                    <---------ZAT18       <---------ANAC58                  <---------At4g35610     <---------ANAC46 --->ANAC46  --------->YAB1               <---------ANAC58 ===============HOX2a_HOX2a       ---------->ID1<---------AHL20(2) --ALFIN1<------ZmHOX2a(1)     --------------->AtSPL8   --------->HSFB2a(2)                      ---- --------->DOF2   --------->At4g35610  <----------DOF2  <---------HSFB2a(2)              ------>NtERF2   acgaaagcttaggaatcgtaagctcactttttttttgttctctttcgtatttaagtttctacaagagcattaagctatctctcactctctctgcccagag  6901500                                                                                            ---------                                        <---------AHL20(2)                     --------->AHL20(2)       --------->ANAC46 --------->AHL20(2)                         ------>ZmHOX2a(1)      ---------->DOF2     --------->ZAT6    --------->AHL20(2)    <-----------GT1   <-----------GT1 <---------AHL20(2) ------->GT1     ----------->GT1       --------->AHL20(2)<---------TOE1(2)    --------->AHL20(2)   --   agaaaaaacactaaacaaatagaaaataaaaaaacaactcataaaattttccattttctcacgattttcctcgtcttaaaaaaaatttctgagaaagaaa  6901600                               --------->LBD16                               ------>ZmHOX2a(1)                       <---------AHL20(2)   ------>MYB83                                <---------AHL20(2)    ------------>CBF   --------->AHL20(2)   ------>MYB46(1)                  *TSS       --------->AHL20(2) -->GT1      ---------->ID1<-----------GT1<---------MYB59                 <-----------GT1 ------->AHL20(2)     <---------AHL20(2)  --------->AtMYB61              <XXXXXXXXXXXXXXXXXXXXMIR1888   aaaaaattcaattttgtcgttttatttattttcctggtttcagaccaaaccagttagaaacaaactcgtttttttttcacaaatttggattttattgttc  6901700                                                                               <---------ARR14(2)                                                                 <---------KAN4(2)                                                                 ---------->TaMYB80                                                              ----------->GT1  --------->ARR14(2)                                                         ---------->CDC5     <---------ETT(1)                                                      <---------At4g35610    ----------->HVH21                                                      <---------ZAT2        --------->DEAR3(2)                                                      --------->At4g35610   --------->MYB46(3)                                                  ------>ZmHOX2a(2)      <---------WRKY18(1)   ------                                                <---------ARR14(2)--------->GLK1(1)        --------->YAB1        ---------->DOF2                         --------->ARR14(2)<---------CCA1(2) <-----------HVH21 --------->At5g28300---------->DOF2 --------->GLK1(1) --------->GLK1(1) ----------->HVH21 --------->AHL20(2)   cactgtgaatgaaaggaaaccaaaaagactcatcggagaaacccatatgggatcggagctcatcgggtatatccatgacccgacccggtcgattaataat  6901800                                                             --------->ANAC46    --------->TOE2(2)                                                             <---------ALFIN1    --------->TOE1(2)                                                           <---------ALFIN1     --------->MYB46(3)                                                          <---------REM1(2) ------>ZmHOX2a(2)                                                ------>ZmHOX2a(2)          --------->CCA1(2)                                               <------ZmHOX2a(2)           <------ZmHOX2a(2)                                              <---------ARR14(3)          --------->ARR14(2)                                              <---------ARR11(3)          <---------ARR11(3)                                --------->At4g35610       <---------ZAT14 <---------ARR14(2)                    <---------MYB52(1)        --------->ARR14(3)          --------->AGP1                   <-----------HVH21          --------->ARR11(3)          --------->ARR11(3)                   <-----------TGA1           --------->ARR14(2)          <---------AGP1                  --------->ANAC46  <---------ALFIN1      --------->ZAT14 <-----------ARR10        ------>ZmHOX2a(1)  --------->REM1(1)  <---------ARR14(2)     <---------ANAC46--------->LBD16 --->GLK1(2)  <---------At4g35610  --------->ZAT14      --------->ANAC46----------->ARR10         ---   ctggctcatcctcttcatctccgtcacttacatcatctacactctcaagatcgtctccactacacacccttgcgaagatctaacctccgagtcaattctc  6901900                                                   <------NtERF2                                                  --------->LBD16                                                 <---------DEAR3(1)                                                <---------LBD16                                               ------>NtERF2                                              <---------RAP2.6(2)    ------>ZmHOX2a(2)                      <---------ARR14(2)     <---------LBD16        <------ZmHOX2a(2)                      --------->ARR14(2)   <---------ARR14(2)      <---------AGP1                    <---------MYB46(3)     --------->ARR14(2)      <-----------ARR10               ---------->DOF2            --------->ATERF1(1)      --------->ARR14(2)        --------->LBD16                   <-------GAMYB            <---------ARR14(2)        ----------->GT1      --------->MYB52(1)--------->LBD16     ------->TEIL                     -      <---------LBD16--------->At5g28300 <---------ATERF1(1)  --------->MYB52(1)                    <     --------->MYB52(1)  --------->ZAT6  <---------MYB46(3)--------->ANAC58       <----------DOF2   < ---------->DOF2--------->DAG2           <---------DEAR3(2)--------->ANAC58   <-------MYC3        <-- -------->RAV1(1)------------>MYB.PH3(1)<---------DEAR3(1) --------->ANAC46   ------->MYC3       <---   caacaaagaccggagaaaaaagcggttacagtaacggttaaggcggttccggcggagcaagaagcaacggatctaaaccatgtggttttcggtattgctg  6902000                                                                            <-------GAMYB                                                                           ----------->GT1                                                    ============================bZIP_DOF                                                    ---------->DOF2        <---------MYB46(3)                                                --------->ANAC58        --------->ALFIN1                                                --------->ANAC46      <---------ANAC58                                                --------->ANAC58      --------->O2                                          <------MYB46(1)             <---------TGA1a                                         --------->MYB59              <---------ANAC55(2)                                       --------->ARR14(1)             <---------O2                  -                                       --------->CCA1(2)              --------->TGA1a               <  <------NtERF2                       --------->ARR11(1)              <---------ANAC58           ---- -------->DEAR3(1)                    --------->ARR11(3)              =============================== ---------DEAR3(1)                    <---------ARR11(3)              <---------ANAC55(1)    -------- ---------ANAC46           ----------->GT1<------MYB83                ==============MYC_MYB========== ---------HVH21        ---------->DOF2--------->ARR14(2)              <---------ANAC46  ----------->GT1 ------ANAC46     ---------->DOF2     <---------ARR14(2)              --------->ANAC55(2)  ----------   cgtcgtcgaagctatggaaacaaaggaaagagtatatcaagatttggtataagccaaagaaaatgagaggctacgtgtggttagacgaagaggtaaagat  6902100                                        <---------ARR14(2)                                        <-----------ARR10                                        --------->ARR14(2)                                 <---------DEAR3(2)                                 <---------MYB46(3)                    ===================bZIP_DOF              --------->ARR11(3)<---------DEAR3(1)             --------->GLK1(1)<-----------HVH21      --------->ANAC55(2)                   ==========      <---------ARR14(2)     --------->TGA1a  --------->LBD16                              <------ZmHOX2a(2)   --------->ANAC46 ---------->DOF2     --------->GLK1(2)                                  ========== -------->ARR14(2)--------->ANAC58     <---------GLK1(2)                                  <---------- ---------ARR14(2)--------->ANAC58   ----------->ARR10  <---------DEAR3(1)         ================== ----->AHL20(2)<------ZmHOX2a(2)<---------At1g77200 <-------TEIL  ================================HOX2a_HOX2a =bZIP_DOF--------->LBD16    <---------O2<---------HSFB2a(1)      ------>ZmHOX2a(1)================== --->GT1<---------LBD16      <---------TGA1a<---------LBD16 <---------DEAR3(2)     <------ZmHOX2a(1) ======================================bZIP_DOF ----------->HVH21--------->TOE2(3) ===============HOX2a_HOX2a >DOF2--------->ARR14(2)     --------->O2<---------GLK1(1)<------NtERF2    --------->MYB46(3)   aaaatccgaaaccggagatcaagaaagtctcccgtcggtgagaatctccggtgatacgtcgtcgtttccttatactaacaaacaaggacaccgatcagcg  6902200  Previous    Next  AGI:  At4g11350.1    Description:  transferase, transferring glycosyl groups. similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT4G23490.1); similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT5G41460.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65925.1); similar to unknown [Populus trichocarpa] (GB:ABK95538.1); contains InterPro domain Protein of unknown function DUF604 (InterPro:IPR006740) Range:  from: 6901677    to: 6904239    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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