Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <-----------HVH21     <-----------TGA1    <---------ANAC55(2)                       <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)    --------->bZIP60(2)                     --------->AHL20(2)--------->AHL20(2)--------->AHL20(2)    --------->ANAC58                      --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)    --------->ANAC55(1)                   <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)    --------->ANAC55(2)                 --------->AHL20(2)--------->AHL20(2)--------->AHL20(2)    --------->ANAC46                    <---------AHL20(2)<---------AHL20(2)<---------AHL20(2)    --------->ANAC58                  --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)    ====================bZIP_DOF      <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)    <---------bZIP60(1)             <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)    <---------O2                <---------AHL20(2)<---------AHL20(2)--------->AHL20(2)         ------    --------->O2  ----------->GT1   --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)-----------    --------->TGA1a             --------->AHL20(2)--------->AHL20(2)<---------AHL20(2) <---------ARR11(3)    <---------TGA1a           --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)   --------->ARR11(3)    --------->bZIP60(1)    <---------AHL20(2) --------->AHL20(2)<---------AHL20(2)--------->AHL20(2)   <-----------STF1       --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)<---------AHL20(2) --  <-----------GT1<---------TOE1(3)--------->AHL20(2)--------->AHL20(2)<---------AHL20(2)  <---------- -------DOF2     <---------TOE2(3)<---------AHL20(2)<---------AHL20(2)--------->AHL20(2)  <----------DOF2 ---DOF2     <----------DOF2  <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)  <---------CCA1(2)   tttttcacgtcatagctttgaggttatattatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatcttttaaa  6898700        --------->AHL20(2)        <---------AHL20(2)                                           --------->ATHB12 <-----------GT1                                                     <---------ICU4                 < ---->DOF2                                                          --------->AHL20(2)             -- ---->AGL15                                     ---------->DOF2     --------->ICU4                --- ------->ARR11(3)        --------->ANAC46--------->YAB1             <---------AHL20(2)    --------->ARR11(3) -----AGL15        <---------GLK1(2)   ------->TEIL            ----------->GT1            <---------ARR11(3)   agataaccatttaaaaatatggattctacagcatgttgatgtatcatatacaaagaaaattcaaatggtattaattgcgatattgtggcaaacatctcat  6898800                                                 --------->GLK1(2)                                            <---------ANAC55(2)                                       <---------ICU4                                         <------                                       <------ZmHOX2a(1)                               <---------ZAT14     <---------YAB1                   --------->ICU4                          ----------->HVH21 ---------ICU4                       <---------TOE1(3)          ---------->DOF2   ------>ZmHOX2a(2) ------->ICU4                        <---------TOE2(3)  <-------TEIL        <---------At4g35610 ------>AHL20(2)                 <------ZmHOX2a(1) <-----------RAV1(2)    <---------WRKY18(1) -------   aaaaattatgttcaagtccctcaaaatcccaaggaggataaggattacgagaatcaggttcaagtttaaaggctcttgacctgatcgacttcacaagaat  6898900                                      --------------->AGL15                                     ----------------->AGL1                                     <-----------------AGL3                                     <-----------------AGL1                                     ----------------->AGL2                                     <-----------------AGL2         <---------TOE2(3)                                 <---------TOE1(2)                  <---------YAB1                              --------->YAB1          ----------->GT1                          ------ ---ICU4                     <---------YAB1      <------NtERF2      <---------------AtSPL8--------->YAB1 -->YAB1           <---------AHL20(2)----------------->AGL3    <------ZmHOX2a(1)        --------->AtLEC2   gactctaaaccttgcccttcttaaatttgctatcataggtccaaaattggcatcgatagttaaaaggattatggtacagggtagtaatccattcaaaaca  6899000                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                         <-----------HVH21                                                       --------->WOX13(1)               <-----------RAV1(1)                                                ------>MYB83                 ------>NtERF2      <----         <---------ANAC58                       ------>MYB46(1)           <---------At4g35610   -----      <---------GLK1(1)                  <----------DOF2             <---------MYB52(2) ------->GAMYB --->ZAT6<---------ANAC58    <---------AtMYB61  -------->P      <-----------GT1        <------------AtMYB77   ctacctagaattcttgccctgttgaagagttttggtgttgtttctttaccaacatgtccatcaatttcacaactatcgctgccttcacaactgtcgcaga  6899100                                                                                           ------>ZmHOX2a(1)                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       <---------ARR14(3)                                                                                       --------->AGP1                                                                                       --------->ARR14(3) ----->NtERF2                                                                          --------->ARR14(2) ----->At4g35610                                                                       <---------ARR11(3) ------ZAT2                                                 <-----------RAV1(2)        <---------GLK1(2) ----->ZAT2----------->RAV1(1)                             <------ZmHOX2a(2)           --------->ARR11(3) ------At4g35610                                          --------->ARR11(3)           <---------ARR14(2) -----ARR14(2)             ------------>CBF              <---------GLK1(1)            <---------GLK1(1) ---->ARR14(2)    <-------TEIL <---------ATHB12    --------->HSFB2a(2)            <------NtERF2   gctgccttctctccaacaggttcatagattccaatgtttagggaagggctcatctagagagatcaggtttcgatggaccatggcctcgagatcctcttaa  6899200                                                                            --------->YAB1                                     --------->ANAC58                      <---------YAB1                                     --------->ANAC58                    --------->YAB1                                   <<<<<<<<<WRKY18                      <---------YAB1                        <------ZmHOX2a(2)                        ----------->GT1                       <---------ARR11(3)                       <---------TOE1(3)             <----------DOF2      --------->WRKY18(1)           <---------TOE2(3) --------->YAB1        --------->ARR11(3)                   <-----------HVH21   gtttgataactcatactttgtgtaagatcatcttaagtcaaggaaatttagtttttgttctatgtcaaggtaatattatgataatgtgtctgtttgtagt  6899300                               <---------AHL20(2)                          --------->At5g28300                         <------MYB46(1)                         <------MYB83                   --------->ARR11(3)                         <---------DEAR3(2)             <---------ARR11(3)                       <---------ORA47(1)               --------->ARR14(2)                     <------MYB83<-----------GT1        <---------ARR14(2)                     <------MYB46(1)                    --------->GLK1(2)                  <---------ANAC46                      <---------ARR11(1)                  <---------ANAC58                      <-----------ARR10                  <---------AtLEC2                     <---------CCA1(2) ------>MYB83                  <---------ANAC58               <---------ANAC58        ------>MYB46(1)           <---------ZAT18<---------MYB52(1)     <---------ANAC58      --------->AtMYB61      --------->AHL20(2) ----------->GT1         <---------ANAC46      <---------MYB59         ------      <---------AHL20(2)<---------MYB46(3)  <-----------RAV1(1)<-----------GT1          <----------DOF2   ctattcattttaatgcccttgcttggtcggtaatttatctgtattcatgttgcttgcaaatcttttctccaaaccaaaccatggtaaacacttttgtccg  6899400                                                                                        <---------YAB1                                                                                      <---------ICU4                                                                                      --------->ATHB51                                                                                      --------->ATHB12                                                                                      -------->ATHB1       <----------DOF2                                                               --------->AHL20(2) --------->TOE1(3)                                                    <------MYB83   <---------AHL20(2) --------->TOE2(3)                   ---------->DOF2                  <------MYB46(1)--------->ICU4 - --------->YAB1          <----------DOF2  <-------TEIL       <---------YAB1          <---------ATHB51 --->ANAC46     --------->AtLEC2<---------WRKY18(1)       <---------ATHB51----------->HVH21        <-   aaaccataactttgtttcattcaaaaactttgtttgaccaaaagttcatagagaatacaaattatgcatgctaggtatgaccttcaaattattgttatgc  6899500                                    <---------AHL20(2)                                         ------                                   --------->AHL20(2)                                       ---------                                  <---------YAB1                                            ---------                               --------->AHL20(1)                                           <--------                               <---------AHL20(2)                  --------->ANAC58         <--------                               <---------AHL20(1)                  --------->ANAC58         --------- ----->ZmHOX2a(2)              --------->AHL20(2)        <------ZmHOX2a(1)                 ------->TEIL -----ZmHOX2a(2)     --------->ANAC46  <---------AHL20(2)--------->YAB1          ----------->GT1   gatcgtctcataaaacttcatctacgacttcattttattatataaacatatgcatgctaggataacaactagcaataggctactcgtaaaatgcagctga  6899600  Previous    Next  AGI:  At4g11340.1    Description:  Toll-Interleukin-Resistance (TIR) domain-containing protein. similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45000.1); similar to resistance gene analog NBS1 [Helianthus annuus] (GB:AAL07536.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 6894203    to: 6899125    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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