Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->YAB1                                           --------->YAB1                                           <--------HAHB4                                       <---------YAB1                                     <-----------GT1                                    <---------YAB1                                  <---------ICU4                                  --------->YAB1    --------->YAB1                                 <---------YAB1    <---------YAB1                     --------->AHL20(1)                                 --------->ICU4 <---------YAB1                        --------->AHL20(2)                               --------->YAB1 <---------ICU4                          --------->ARR11(3)         <-------GAMYB         <--------HAHB4<---------YAB1                           <---------AHL20(1)        <---------MYB46(3)    <---------YAB1 --------->ICU4                           <---------AHL20(2)  --------->ANAC55(2)       ============================MADS_MADS                     <---------ARR11(3)  <---------ANAC55(1)       --------------->AGL15--------->YAB1 <------ZmHOX2a(1)    --------->AHL20(2)  <---------ANAC55(2)      <---------YAB1 <---------YAB1    ---------->DOF2        --------->AHL20(2)  <---------ANAC46       <-----------GT1--------------->AGL15 <---------TOE2(3)  --------->AHL20(2)   agttatgtgtctgttagaactggatttttactattattattactattattattatcatcgattaaaggatgttttttgatgaaaaaaatatattgttcta  6863700                                   <-----------GT1                  ------>ZmHOX2a(2)                               --------->AHL20(2)                 <---------ARR11(3)                               --------->ATHB51                   --------->ARR11(3)                           <-------TEIL                      --------->GLK1(2)                      <---------LBD16                       --------->ARR14(2)                   <---------GLK1(1)                        <---------ARR14(2)                   --------->GLK1(1)                        <---------GLK1(2)              ---------->DOF2 <---------MYB52(1)       <-----------GT1----------->GT1             <--    ----------->RAV1(1) --------->LBD16              <---------AHL20(2)                       <------   tttagccaacaaaatgaaaagaattccggtccattattttccatcaaatacaaattttaacagattctgatcttgtaaaattcaaattgatgtctcattt  6863800                                                     <---------ICU4                                               ----------->RAV1(1)                                               --------->ANAC46      <---------ARR14(2)                --------->At4g35610      --------->ARR14(2)                <---------At4g35610   <---------------AGL15               <---------TOE1(2)   --------------->AGL15         ------->TEIL  <---------ALFIN1  ----------------->AGL1         XXXXXXXXXXXXXXXXXXXX>MIR398A                                     <--  ----------------->AG           XXXXXXXXXXXXXXXXXXXX>MIR398B/C            <------MYB46(1)       ----  <-----------------AGL1      --------->ANAC55(2)    --------->YAB1        <------MYB83--------->ANAC46  ----------------->AGL2      <---------ANAC55(2)   --------->ICU4<-----------GT1 <---------ARR14(2) --------DOF2                --------------->AtSPL8 <---------ATHB12      --------->MYB59   --------- ---CCA1(2)             <---------TOE2(3) --------->PCF2     <----------DOF2      --------->ARR14(2)   cttttccaaatactgaaattggacttaatgttatgtactctcaggtcccccacaatgatcactctttttcacaaatttggttcaaatccactccaaaaga  6863900                                                                                               <-----                                                                                              <------                                                    <------ZmHOX2a(1)                         -------                                                 --------->YAB1                               ------- -----TEIL                                       <---------ICU4                               <------ ----->CCA1(2)                           --------->MYB46(3)             <----------DOF2<---------AtLEC2 ->DOF2        <----------DOF2         --------->YAB1                <-----------GT1<----------DOF2<-   tacaaaaacaattcaaactttagggaagtcaaacaaaactataacaaacaataaggaccattttgaaatttctactttcttcagttctttcatggaactt  6864000                                                           ----------->TBP                                                         --------------->AGL15                                                         <---------------AGL15                                                 <---------MYB59                                         ----------->RAV1(2)                                         --------->At4g35610                                    --------->REM1(2)   ----------------->AGL3                  ----- -----DOF2                          <---------ZAT14     <-----------------AGL3                  ----- ---HSFB2a(1)                       --------->ZAT14   --------->TOE2(3)                         ----- -->HSFC1(2)                        <---------ZAT18------>MYB46(1)                           *TSS -->HSFB2a(1)         <---------ALFIN1   <---------At4g35610                        ----------->RAV1(1) ---HSFC1(2)       --------->ANAC46 --------->ZAT18------>MYB83                    --------->ANAC46 ------GAMYB      ------->GAMYB  <---------ANAC46--------->AtMYB61   ------------>CBF <---------ALFIN1   tcgttgtaatctatctacaacgctccacatactcggtgtgtacacctgaaaccaaacctctatatatagaacacaatctcacttcccaacacatcaaacc  6864100                                                                                                 ----                                                                                            <------ZmHOX2a(2)                                                                                            ---------                                                                                           --------->ARR14(3)                                                                                           <---------ARR14(3)                                                                                           --------->ARR14(2)                                                                                           --------->ARR11(3)                                                                             ------->GAMYB <---------AGP1                                                                          ----------->RAV1(1)------>ZmHOX2a(2)                                                                    <----------DOF2        --------->AGP1        <-----------ARR10                                          <---------ANAC46        <---------ARR11(3)       <---------CCA1(2)                                           <---------ANAC58        <---------ARR14(2) ---->TOE1(3)                                <---------TOE2(3)     <---------ANAC58      ----------->ARR10 ---->TOE2(3)   ------->GAMYB        --------->TOE2(3)            <------NtERF2      --------->ANAC58 ---->YAB1--------->TOE2(3)  ---------->DOF2---------->DOF2     <---------RAP2.6(2)  --------->ANAC58   ataacttccaaatctcaacagaaccaaaaacaaaagaaacctatattaaagaagaaacaaaaaatggtggcttttgcaacagagaagaagcaagatctga  6864200                            --------->WRKY18(1)                            ----------->HVH21                           <-----------HVH21                         <---------ANAC46                        <-----------------------TaNAC69(2)                      ----------->HVH21                     <-----------HVH21                      <------MYB46(1)                    --------->LBD16                         <------MYB83                    <---------At4g35610                   <--------P                    --------->At4g35610                  <-------GAMYB                           <---                  <-----------RAV1(2)       ------>ZmHOX2a(1) ---------->DOF2           --------->ANAC58                  <---------LBD16      --------->GLK1(1)<---------MYB46(3)              --------->ANAC58 --->TEIL        ------>NtERF2         <---------GLK1(1)--------->MYB55(2)              --------->ANAC46 >CCA1(2)       --------->DEAR3(1)<---------ANAC46      --------->ATHB12              <-----------GT1   atctattgtctaaaatcgcctccggtgacggtcacggcgagaattcctcttatttcgatggttggaaagcttatgaagaaaacccatttcacccaattga  6864300                                                                   <----------DOF2                                                       --------->YAB1                                             --------->WOX13(1)   --------->TOE2(3)               ---                                           <---------YAB1       -------->P                        ---    --------->MYB52(1)                 --------->ANAC55(2)      ------>MYB46(1)                 <----   ----------->TGA1                    <---------ANAC55(2)      ------>MYB83           <---------MYB59   ----------->HVH21                  --------->MYB59 --------->AHL20(2)               --------->TOE2(3) ------WOX13(1)                    --------->GLK1(2)--------->YAB1<---------DAG2       --------->TOE1(3)   tagacctgacggagttattcaaatgggtctcgctgaaaatcaggtatcattcaaaaataaaaatccaaccttttttttttttggtctaacctaaaaaacc  6864400                                               <---------ANAC58                                               <---------ANAC58                                               <---------ANAC46           <---------HSFB2a(1)         <-----------GT1                       --------->ANAC55(2)        --------->HSFB2a(1) <----------DOF2                        --------->CCA1(2)                 <---------HSFC1(2) <---------DAG2                        <---------ARR14(2)                 --------->HSFC1(2) --->MYB83                           ----------->ARR10                  <---------GLK1(2) --->MYB46(1)                   <---------ANAC46  <---------ARR14(2) --------->HSFB2a(2)         ---- -----MYB59 <----------DOF2   <----------DOF2  <---------ANAC55(2)   <---------HSFB2a(2)         ----   taacttttttttttcttttctgaattgtgtagctttgtggagatttgatgcgtaaatgggttttaaaacatccagaagcttcgatttgtacatcagaagg  6864500                                              <---------ANAC58                                              <---------ANAC46                                              <---------ANAC58                                          <---------ANAC58                                          <---------ANAC46                   <---------ANAC58                                     --------->YAB1                          <---------ANAC46                                     <---------ICU4                     =================RAV                                    <---------YAB1                      <-----------RAV1(1)                                <---------GLK1(2)               ----------->GT1 ----->ALFIN1             <-----------GT1 <---------ANAC58  --------->ANAC58 <---------ANAC58 ------->GT1----------->HVH21   <---------ARR11(3)          --------->ANAC58 ----------->RAV1(2)   tgtgaatcaattcagtgacattgccatttttcaagattatcatggcttgcctgaattcagacaagtaagttatattgttgcctgaactcagacaatttca  6864600  Previous    Next  AGI:  At4g11280.1    Description:  ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6). Identical to 1-aminocyclopropane-1-carboxylate synthase 6 (ACS6) [Arabidopsis Thaliana] (GB:Q9SAR0;GB:O82719;GB:Q9SUT3); similar to ACS1 (ACC SYNTHASE 1), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT3G61510.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Gossypium hirsutum] (GB:ABC75833.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Brassica juncea] (GB:CAA51227.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Brassica oleracea] (GB:CAA57724.1); contains InterPro domain Aminotransferases, class-I, pyridoxal-phosphate- Range:  from: 6864093    to: 6866112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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