Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->AHL20(2)                                                                                --------->TOE2(3)                                                                               <---------ANAC46                                                                       <---------AHL20(2)                 <---------ANAC58                                     <---------AHL20(2)                 <---------ANAC58                                 <---------AHL20(2)             <----------DOF2                                      --------->AHL20(2)   <-----------GT1             <---------DAG2                                   <----------DOF2 <---------TOE2(3)          ---------->ID1            --------->YAB1        <-----------GT1    <-----------GT1         <-----------GT1           <---------YAB1       <---------ICU4--------->AHL20(2)            < ---->DOF2<-----------GT1  --------------->AGL15        -------->ATHB1<---------AHL20(1) <---------YAB1   agtcaatagtttttccttttcgttcttctccatatttatgaaaactcccatagatgaattattcctttttaatttttttttacgtttatttacaattgaa  6810700                                         <---------AHL20(2)                                         --------->AHL20(2)                                     --------->AHL20(2)                                     --------->ATHB51                                     <---------AHL20(2)                                     <---------ICU4                                    --------->ICU4                                    <---------YAB1                                  <--------HAHB4            <-----------HVH21                                  --------->ATHB51         <---------bZIP60(1)                                  --------->YAB1           --------->bZIP60(1)                                  <--------ATHB1        <-----------RAV1(1)                                  <---------ICU4       <---------TOE2(3)                            <           <---------AHL20(2)    <---------ATHB51 <---------ICU4                               <-----           --------->AHL20(2)    --------->AHL20(2)  <---------AHL20(2)                        ------     <---------ANAC58            <---------ATHB12<---------YAB1                                <-----     <---------ANAC58            --------->ICU4  --------->ICU4                                ------ ----------DOF2          --------->ARR14(2)    --------->YAB1 <-----------GT1               ---------   gtctttttcttgttttattaagttccatattttcaataattatttaaaatcataatttatgttgtcacaacctatagtatatagttatagtttttaaaat  6810800       <---------AHL20(2)      --------->AHL20(2)                                                               <---------ANAC58 ---------AHL20(2)                                        --------->HSFB2a(2)          --------->ANAC55(2) ----AHL20(1)                       <----------DOF2       <---------HSFB2a(2)          <---------ANAC58 --->AHL20(2)                 ---------->DOF2         <----------DOF2  <---------AHL20(2)      ------ ----AHL20(2)              --------->At4g35610  ----------->GT1  ------->TEIL        <---------AHL20(2) --->AHL20(1)              <---------At4g35610 --------->DAG2   <---------AtLEC2     <-----------GT1 >AHL20(2)                ----------->RAV1(1) ---------->DOF2  <-------TEIL   ---------->ID1<--------   attaaaaattttatagcaaaaatttatgcagcaaaagtctttacagccaaaagtaactttcgagatgcatgttttaatttgtcttatttacttgatgata  6810900                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          --------->YAB1                                                                       --------->YAB1                                                                      <---------YAB1                                                                      --------->ICU4                -                                                                    --------->YAB1                  <                                         ---------->ID1            <---------AHL20(2)               <                    <----------DOF2    <-----------RAV1(1)         <---------YAB1                   -        <---------At4g35610      ------->TEIL--------->ETT(2)     <---------AHL20(1)       <--------- ---------->DOF2------>NtERF2  <-------TEIL  <---------ETT(2)     --------->AHL20(2)      --------->bZIP60(2) --->CCA1(2)   ----------->HVH21<---------AtLEC2             ------------>CBF         <---------At5g28300 -YAB1  --------->At4g35610 --------->At4g35610<---------REM1(2)  --------->AHL20(1) <-----------GT1-   tacaaaagtcagcctaggcgacctttaatgagatgcatgttttgttgtctacaagggtctagttgcaatataataataaaaatgaaattaccatgtcatt  6811000      <---------ARR11(3)    --------->ANAC58      --------->ARR11(3)    --------->AtLEC2      --------->GLK1(2)     --------->ANAC58 -------->HSFB2a(2)         --------->ANAC46                                       ------------>CBF ---------HSFB2a(2)         <---------ANAC55(2)        <------------CBF          --------->ANAC58 ---------HSFC1(1)          --------->ANAC55(1)      --------->AHL20(2)          --------->ANAC58 -------->HSFC1(1)     ----------->HVH21            ----------->TBP     --------->ANAC58 --HVH21       <-----------GT1 ---------->DOF2 --------->GLK1(2)        --------->ANAC46  <---------- ----->ZmHOX2a(1)    <----------DOF2          <---------GLK1(2)         --------->ANAC58--------->AHL20(2)   tcctagaaaatctcatattacaactttgacacgcaaaggcattccatagattctataaattgctctcccaaaacactccaaacaagtcaatataacaaat  6811100                                                          <----------DOF2                                                      --------->O2                                                      <---------O2                                                  <-------TEIL ------>ZmHOX2a(1)              <------                                                 --------->CCA1(2)                         <---------                                                 --------->ARR14(1)                   --------->LBD16                                                --------->ARR14(2)                   --------->ANAC46                                                <---------ARR14(2)              --------->ARR11(3)            ------>ZmHOX2a(1)  <<<<<<<<<TBF1    --------->ARR11(1)              <---------ARR11(3)  - -GT1------------>CBF    <---------At4g35610   <---------GLK1(1)<---------TOE1(2)    --------->ANAC55(2)   ttttatcttcaatcctctccccatggcatcttcttcttcaaactcttggagatacgacgtctttcctagtttcagaggggaagatgtccgtaataacttt  6811200                                                                                --------->WRKY18(1)                                                                               <-----------HVH21                                                                             ------>ZmHOX2a(2)                                                                           --------->ARR14(2)                                                                       <---------ALFIN1                        --------->ANAC58                             ----------->RAV1(1)                        --------->ANAC58                          --------->ANAC46             ------ ----DOF2             ---------->DOF2                             --------->ANAC58           -------- --GT1      ---------->DOF2---------->DOF2                        --------->ANAC58    --------->At4g35610 -------->ANAC46 --------->GLK1(2) ----------->GT1           ---------->DOF2<------ZmHOX2a(2)<-------   ctcagccacttgctcaaagaatttgaaagcaaaggaatagtgacattcagagatgaccatatcaaaagaagccacacgatcggtcatgagcttagagcag  6811300                                                                                 ====================                ------>ZmHOX2a(2)                                                ====================               <------ZmHOX2a(2)                                                 <------ZmHOX2a(2)               <---------GLK1(1)                                                <---------ARR11(3)              <---------AGP1                                               <---------WOX13(1)       --------->GLK1(2)                                                 --------->ATHB12       <-----------ARR10                                              <---------At4g35610      <---------GLK1(2)                                               --------->ZAT2           <----- --->RAP2.3(3)<---------ARR11(3)                      <---------ZAT2  <---------ZAT2   <---------ANAC46 ->At4g35610  <-----------ARR10            <---------YAB1   <---------MYB46(3)  --------->ARR11(3) --At4g35610  --------->ARR11(3)     --------->ZAT14  --------->ZAT2  --------->At4g35610<---------ZAT6   ccattagagaatctaagatctcagtagtcttgttctcagagaactatgcttcttcaagctggtgtttggacgagctgattgagatcatgaagtgtaagga  6811400                                           <---------At4g35610                                        <-------TEIL                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                                      <---------ARR14(2)                                     --------          ---------->DOF2          --------->ALFIN1                                          <-------     <------ZmHOX2a(1)         ---------->DOF2                                      <---------ANAC46 =HOX2a_HOX2a               --------->HSFB2a(2)                   ---------->DOF2   <---------ANAC58 ===========HOX2a_HOX2a     <---------HSFB2a(2)                 --------->LBD16     <---------ANAC58 -ZmHOX2a(1)          <---------MYB52(1)------>ZmHOX2a(2)    --------->MYB52(1)   --------->GLK1(2)   agaacaaggactgaaagtgatgccggttttctacaaagtggatccatctgatataagaaaacagaccggaaagtttggaatgagtttcttggaaacttgt  6811500                                         <---------WRKY18(1)                                        --------->WRKY12                                        --------->WRKY38(1)                                        --------->WRKY45                                        ----------->HVH21                                       --------->DOF5.7(2)                                     <---------ANAC58                                     <---------ANAC46                                     <---------DEAR3(1)                                     <---------ANAC58                                   <------NtERF2                                   ------>NtERF2                                  <---------DEAR3(1)                                 <---------ANAC58                                 <---------ANAC46                                 --------->ALFIN1                         ------>ZmHOX2a(1)         <                                 <---------ANAC58                   =============HOX2a_HOX2a        -                                <------NtERF2   --------->At4g35610 <------ZmHOX2a(2)               <            <------ZmHOX2a(1)   --------->ATERF1(1)       <---------YAB1 --------->TOE2(3)      <----          --------->ALFIN1    <---------DEAR3(1)<---------At4g35610<---------ARR11(3)          <----- ------->AGL15          --------->MYB52(1) <---------WOX13(1)      --------->ARR11(3)          ------ --------AGL15     ----------->RAV1(1)<-------GAMYB------>NtERF2  <---------GLK1(1)         ---------   tgtggtaagacggaggagcgacaacataactggaggcgggcgttgactgatgctgccaatattcttggagatcatcctcaaaattggtgagtttttatat  6811600  Previous    Next  AGI:  At4g11170.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. Identical to Putative disease resistance protein At4g11170 [Arabidopsis Thaliana] (GB:O82500;GB:Q9T016); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G65850.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G49140.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16326.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains I Range:  from: 6811123    to: 6817126    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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