Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ------->GAMYB                                             <----------DOF2  ----------->RAV1(1)                <--- --->At4g35610                            <-----------GT1    --------->MYB46(3)   <---------ANAC58 -ZAT2                               <----------DOF2    --------->ANAC58          <---------ANAC58<-- -At4g35610                          <---------DAG2     --------->ANAC58  ------->TEIL           ----   tccaacttgtttatggtcttcttcacttggtactgaaaacttttttactttctgagacaaacaacaacagaagatgaatcaaggccttgctcaatctaag  6777400            =========================================================================================            --------------->AGL15           --------->REM1(1)                                         --------->ANAC58  <---------At4g35610                                  --------->ZAT14  --------->ZAT2                                       <---------ZAT14 ------ARR11(3)                    --------->YAB1      --------->ZAT18       ----------->GT1        < ----ZmHOX2a(2)      ---------->DOF2  ---------->DOF2  <---------ZAT18 ----------------->AGL1       < ----->ARR11(3)   --------->YAB1<---------ICU4   --------->YAB1      --------->ANAC58               -   atcaagctgtcttacatctatgagaaagacttaagaatcacaaagaagaattcatagtgaactagtgaagcatgccatatggaaaaacaattgttcaaaa  6777500         <------ZmHOX2a(1)       <---------TOE2(3) <---------------AGL15               --------->TOE2(3) --------------->AGL15               --------->TOE1(3) ================MADS_MADS      --------->MYB46(3) -----------------AGL1       <----------ID1 -----------------AG ---------->DOF2 --------->TOE1(2)            <---------ZAT14 ---------------->AGL2    ---------->DOF2          <---------GLK1(2)                         ------>ZmHOX2a(2)   actccaattgaggaaatgttggaaaaagaaaagaacaaaccttagatagaacacattctcagagagattgcagtagaattagacatttctcttgatcgaa  6777600                                <---------GLK1(2)                               <---------ZAT2                               <---------At4g35610                            <---------At5g28300                           <-----------GT1                   <----------DOF2                          <-------TEIL                     <---------HSFC1(2)     --------->TOE2(3)                         --------->CCA1(2)                 --------->HSFC1(2)     --------->TOE1(3)                        --------->ARR14(2)           <------MYB46(1)      <---------YAB1                        <---------ARR14(2)         <--------P<---------DAG2--------->YAB1       --------->LBD16----------->ARR10---------->ID1<------MYB83       --------->YAB1     ----------   tttcgattccgaaacacaattgagaagattcacagcttcttgtcgtcaaattggtaggggaagctttttctccattatcataaaccctaaactaaaagtt  6777700                                                                        ------------>CBF                                                                        ----------------->AGL1     --                                            --------->PCF2          <---------DAG2                *TSS                                            <---------PCF2          <----------DOF2         --------- >DOF2         <---------AHL20(2)    ------------>CBF      --------->TOE2(3)              <----------   tctgcaaaaacaactattttatcgaactcttaatgggccatcaatgggcccatacttataaacttaaacccttttccaatttcagtcgtattttacaaaa  6777800                                               <---------At4g35610              --------->O2                                            ==============================================MYC_MYB                                            <--------P                          <---------TGA1a                         ------>MYB46(1) --------->LBD16                        <---------O2              --------->YAB1             ------>NtERF2                          =====================  <---------ALFIN1       ------>MYB83--------->DEAR3(1)    --------->ANAC58     --------->TGA1a ------->AtMYB61      --------->MYB46(3)<---------ANAC46   --------->ANAC46     --------->ANAC46 -->TBP      <---------YAB1    <----------DOF2 --------->At4g35610     ------>ZmHOX2a(2) -GT1--------->DEAR3(1)<---------MYB59 <---------LBD16     --------->ANAC58 <-----------HVH21       -   accatcaccgtcgttatcacagtaaccaaacaactttcatcgccgggtaagctccattcccaagctatttcgatctcgtttcacgtcgatctatttctag  6777900                       <---------AHL20(2)                       --------->AHL20(2)                   ----------->GT1      <---------ANAC58                      --------->ARR11(3)                  <---------TOE1(3)     <---------ANAC46                      <---------ARR11(3)                  <---------TOE2(3)     <---------ANAC58               <---------ANAC58        <-----             <----------DOF2        <---------ANAC58                   <---------ANAC58       ------- =======================bZIP_DOF    <---------ANAC58           --------->GLK1(2)  ---------->DOF2 ---------->GT1<XXXXXXXXXXXXXXXXXXXXMIR1887                   <---------GLK1(2) ------>ZmHOX2a(2) <--   tcaagttaatctcttcttttagggtttaattagttaagacttgcgtttgattatctcaagttcagaatttgtttcttgatgatctaaaggaaggaatttt  6778000               <---------ARR11(3)                                        <---------ZAT14               --------->ARR14(2)             <---------TOE2(3)          --------->ZAT14               <---------ARR14(2)          <---------WOX13(1)   <-------GAMYB ----AHL20(2)  --------->ARR11(3)       --------->ICU4        <---------ANAC58                   <--- -->AHL20(2)<---------TOE2(3)       <---------ZAT14           <---------ANAC46  --------->At4g35610-- ---------GT1 <------ZmHOX2a(1)     --------->ZAT14           <---------ANAC58  <---------At4g35610<-   atacttatcaaattgaggatttttgtttttggatgcagagaactgattaacatataagaaaatggcgtttgctagagcagtgagaagaccaattggagtc  6778100                                        <---------ARR14(2)        <---------ZAT6             --------->ICU4   --------->YAB1            --------->HSFC1(1)            <---------ARR14(2)                   <----  <---------YAB1             <---------HSFC1(1)            --------->ARR14(2)               ------->TEIL -------DOF2                 --------->HSFB2a(2)      --------->ANAC58                    <---------ZAT14 ------->AHL20(2)            <---------HSFB2a(2)      --------->ANAC58            ---------->DOF2  -- --------AHL20(2)           <---------LBD16    <-----------RAV1(1)  <----------DOF2       --------->ZAT14   ttttattatagtgttagtagtagatttagttctggaaatgagtattctactgtggcaagcaaattcgaaactttgtctcagtacaaaagctctgtaccgt  6778200                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                      <---------ARR14(2)                                                                      ------->TEIL                                                                     <---------CCA1(2)                                                                   <----------DOF2                                                                 --------->At4g35610                                                                 <---------At4g35610                                                                ------>ZmHOX2a(1)                                                              ----------->RAV1(2)                                                             ------>ZmHOX2a(1)                                                            <---------ALFIN1                                                        --------->At4g35610                                                        --------->HSFC1(2)                 <---------ANAC58                       <---------HSFC1(2)        --------->ANAC58                                --------->HSFB2a(1)        --------->ANAC58                                <---------HSFB2a(1)    ------>MYB46(1)        --------->ANAC46                                <---------ZAT2--------->ARR14(2)     -------- -----MYB52(1)   <---------ANAC58     --------->ANAC46  <---------At4g35610    ------>MYB83  -------- --------->GT1   --------->MYB52(2)  <---------LBD16   ----------->ARR10 ----------->HVH21   --------   ctggttacacaagccttgttcgtggttttgggaatttcatacggagttttagttcggaagctcctcctgctgtatctgaccaaatgagtcttattaagca  6778300  Previous    Next  AGI:  At4g11120.1    Description:  translation elongation factor Ts (EF-Ts), putative. similar to EMB2726 (EMBRYO DEFECTIVE 2726), translation elongation factor [Arabidopsis thaliana] (TAIR:AT4G29060.1); similar to ethylene-responsive elongation factor EF-Ts precursor [Lycopersicon esculentum] (GB:AAD46403.1); contains InterPro domain Translation elongation factor EFTs/EF1B; (InterPro:IPR001816); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Translation elongation factor EFTs/EF1B, dimerisation; (InterPro:IPR014039); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449) Range:  from: 6777798    to: 6780162    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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