Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------AtLEC2               --------->YAB1               -------->ATHB1               --------->ATHB12               <--------ATHB1               --------->ATHB51               <---------ICU4       --------->ATHB51              --------->ICU4        <---------ICU4           --------->GLK1(1) --------->ANAC58    <---------ANAC46       --------->ARR11(3) --------->AtLEC2    <---------ANAC58       <---------ARR14(2)           ------>ZmHOX2a(2) --------->ANAC58    <---------ANAC58      <---------CCA1(2) <---------ARR14(2) -->MYB46(1)  <---------YAB1       --------->ICU4            --------->ARR14(2) ---->P     --------->WOX13(1)     <---------YAB1            <---------GLK1(1)      --------->TOE2(3) -->MYB83  ------------>ATHB5    --------->YAB1          <------ZmHOX2a(1)    --------->ANAC46   <--- ->ZmHOX2a(1) <---------ATHB12  <---------YAB1           =======================HOX2a_HOX2a    <-----   accatgccaagttccaatcattggagtgcatgttttcattatttcatatctagcatttaggagaattctcactgatctaaacacaacctcagtaaatttt  6737700                                                  <---------AHL20(2)                                                <---------YAB1                          --------->ANAC58                                               --------->AHL20(2)                       --------->ANAC58                                             <---------AHL20(2)--------->ZAT14          --------->ANAC46           --------->ARR11(3)               --------->YAB1     <---------ZAT18     <---------ICU4           <---------ARR11(3)              <---------YAB1      --------->ZAT18     --------->YAB1 --------GT1        <---------DAG2  --------->GLK1(2)          <---------ZAT14    --------->ICU4 ----AHL20(2)       <----------DOF2<---------GLK1(2) --------->ANAC55(2)        --------->YAB1   <---   aacaacttatagacatcttcaacttttcatgagcatagaatctttataatattatatgtaatatgtgcactatattagataacaataatcacacaatata  6737800                                                           <-----------GT1                                                       <---------ARR11(3)                                                       --------->ARR11(3)                           - --------GT1                --------->YAB1           ----------->ARR10                            <--   aactctatgcattgatataagtttgtgcaagtataaaactaaaacatataatgctgagattttacatatgaaatgaaaacatatcaaatttgaagaatca  6737900                                                      --------------->AGL15                                                      <---------------AGL15                                                     ----------------->AGL3          --------------->AGL15                                                     ----------------->AGL1          <---------------AGL15                                                     <-----------------AGL2         <----------------          ---------->DOF2                            ----------------->AGL2       --------->ZAT6       --------->AHL20(2)                 <------------CBF                  <----------DOF2      --------->AHL20(2)                <---------AHL20(2)            --------->ANAC46 ---------->GT1                        --------->ICU4================================================MADS_MADS --------DOF2              --------->AHL20(2) <---------ZAT6   --------->YAB1   <-----------GT1   ctttgtaaataaaaaagaagtttcacacttaaaatagagtaatgaattgtgttattccaaatttagaataacacactacttttaactctatttttggaat  6738000                                                 ------------>CBF                                       --------->LBD16                                       ------>NtERF2                                      --------->RAP2.6(2)                                   --------->ANAC58           <----------DOF2                                   --------->ANAC46  <---------ATHB12           --------->WOX13(1)                         <---------LBD16        --------->ANAC58              ------------>CBF                        --------->MYB52(1)      --------->ANAC46 <---------AHL20(2)       --------->O2 <---------ANAC46       -------->P --------->ANAC58--------->WOX13(1)     --------->YAB1  --------->ANAC46 -AGL3  --------->ARR11(3) --------->LBD16      --------->ANAC58 --------->AHL20(2)    <---------ETT(2)   gcgacttggagataatgctcttaaactaccgggtttcaagccgcgaactcactcaatcacttagcttttaattcaaacatagcaatctgtccacgagaga  6738100                         ---------->DOF2                 <-----------HVH21                <---------ANAC58                <---------TGA2(1)                <---------TGA1a                --------->TGA1a                --------->O2                --------->bZIP60(1)                             <-----------RAV1(2)                <---------bZIP60(1)                           ----------->RAV1(1)   <------MYB83                <---------bZIP60(2)                    <---------TOE2(3)            <------MYB46(1)                <---------O2                           <---------TOE1(3)           <---------MYB46(3)                --------->TGA2(1)                   <----------CDC5                <---------AtMYB61                <---------ANAC58         <---------ANAC46  --------->ANAC58       <---------MYB55(1)                ====================bZIP_DOF      --------->RAP2.6(2)             <---------MYB52(1)                ====================bZIP_DOF    <---------At4g35610               <--------P                ===============================================MYC_MYB  --------->GLK1(1)               ----------->STF1         <---------TOE2(3)<------ZmHOX2a(1)       <-------GAMYB  -----              <---------TGA2(2)     <----------DOF2--------->At4g35610  <---------GLK1(1)------>ZmHOX2a(1)             ----------->TGA1  <-------TEIL--------->ALFIN1--------->ANAC58     <---------MYB46(3)   gcgagagagaacaaaatgacgtcgcagaaaagattcatctttgaggtggaagccgctaaggaagccacagatggaaatccctcggttggtcctgtctatc  6738200                                                                         --------->GLK1(2)                                                                         --------->ARR14(2)                                                                <---------LBD16                                                          <---------CCA1(1)                                                          <---------RVE1(1)                           ------->TEIL                  --------->ARR11(3)                        --------->LBD16                  <---------ARR11(3)                       --------->HSFB2a(2)          <---------ANAC46     <---------ARR11(1)                       <---------HSFB2a(2)         --------->ZAT2        <---------ARR14(2)                    --------->GLK1(1)              <---------ZAT2        ------->TEIL                    <---------GLK1(1)              <---------At4g35610  <---------GLK1(2)                   <---------ARR14(2)           <---------ZAT2 <-----------GT1     <----------DOF2                   <---------GLK1(2)            <---------At4g35610     <---------CCA1(2)    <----------DOF2--------->ARR14(2)        ---------->DOF2  <-----------GT1 <----------DOF2 ---->YAB1    --------->MYB52(1) <------ZmHOX2a(2) --------->At4g35610  <---------ARR14(1)   gtagtacttttgctcagaacggattcccgaacccgatcgatggtatccaaagctgctgggatattttccggtccgaatctcttttcttttaatgtgttct  6738300                                                           <---------At4g35610                                                         <---------ZAT18                          ---                                                         --------->ZAT18                         <---                                                        <---------ANAC58                   >>>>>>>>>>ABI3                                                        <---------ANAC58                   >>>>>>>>>>FUS3                                              --------->ANAC58     <-------TEIL         <---------ANAC58                              --------->AtLEC2--------->ANAC58   <---------ARR14(2) <---------ZAT14                         <-----------GT1      --------->ANAC46   --------->ARR14(2)--------->ALFIN1                       <-----------GT1<----------DOF2 <---------ANAC46   <---------YAB1 <---------ANAC58   attgtttaagtctattgtttttttttttctccatgcattgctatttggacgacattttgtgtgctcatatacgttttgatttagagtgtagcatgcatta  6738400                                                                               --------->YAB1                                                                               --------->ATHB12                                                                               <---------ICU4                                                                              <---------YAB1                                                     --------->AHL20(2)       --------->ICU4                                                     <---------AHL20(1)     --------->YAB1                                           ------>ZmHOX2a(2)          <---------ANAC55(2)                                          <------ZmHOX2a(2)           --------->ANAC55(2)                                         <---------ARR14(2)           --------->ANAC58                                         --------->ARR11(3)           --------->ANAC46                                         <---------ARR11(3)          ------->TEIL                             <---------CCA1(2)       --------->AHL20(1)    --------->ICU4       <----          ----------->GT1   ------->TEIL --------->ARR14(2)      <---------------AtSPL3      -------- ------>YAB1       --------->YAB1  <------ZmHOX2a(2) <---------AHL20(2)--------->TOE1(2)     <------- ------YAB1       <---------YAB1  <-----------HVH21 --------->AHL20(2)--------->ANAC58      <--------   tcattttgaaacatgttaatatgataaacgtatatcgatcagggatcttgggaattttatttcatgttttgtacgtaagaatgattactaagttatatct  6738500                                                          <---------At4g35610     <---------AtMYB61                                                        <-----------GT1      --------->ANAC55(2)                                                 ----------------->AGL3      <---------ANAC55(1)                             <---------ANAC58    <-----------------AGL3      <---------ANAC55(2)                             <------MYB83        <-------TEIL                <---------ANAC46                             <---------ANAC58   <------ZmHOX2a(2)            <---------ANAC58                             <------MYB46(1)   --------->ARR11(3)            <---------ANAC58 ------DOF2                 <---------MYB46(3) <---------ARR11(3)       <----------DOF2 ->ARR11(3)                 --------->MYB111(1)--------->ARR14(2)  <---------ANAC58            <----- --ARR11(3)                 <---------AtMYB61  <---------ARR14(2)  <---------ANAC58         --------- -CCA1(2)                   --------->MYB46(2) --------->AGP1  <----------DOF2 ----------->HVH21   ttggctcaaaatgaatgaatactgaattgtttggtgtcaattcttgtaagatccatttttagcttcttttcttgctcttacgtgatggttttgtctgaca  6738600  Previous    Next  AGI:  At4g11030.1    Description:  long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative. similar to long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase [Arabidopsis thaliana] (TAIR:AT4G23850.1); similar to LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) [Arabidopsis thaliana] (TAIR:AT1G49430.1); similar to long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative [Arabidopsis thaliana] (TAIR:AT1G64400.1); similar to acyl-CoA synthetase [Brassica napus] (GB:CAA64327.1); similar to ACS-like protein [Gossypium hirsutum] (GB:ABA00144.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96686. Range:  from: 6738116    to: 6742225    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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