Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <----------DOF2                                          <---------AHL20(2)                                          <---------YAB1                                         <---------AHL20(1)             --------->ATHB12            --------->AHL20(2)             -------->ATHB1              --------->AHL20(1)             --------->YAB1             --------->YAB1                                        <------    <---------ARR14(2)            --------->ARR11(3)                                          -------    --------->ARR14(2)            --------->GLK1(2)                                          <-------TEIL   --------->WOX13(1)             <---------ARR11(3)                                     <----------- --->REM1(1)<---------YAB1 <---------ZAT6<---------AHL20(2)<---------MYB52(1)           ---------->DOF2   tcagccaatctactatcattgaaattgtagtgagaaaatctaatataattctttagtgactgtttgtcaaaaaaaaaaaaaactcatgtctaaagtacat  6674600                                                                          <---------YAB1                                                                        --------->ATHB12      <------                                                                        <---------ICU4        ------- ---ANAC55(2)                              <-----------GT1             <---------YAB1   --------->TOE2(3) -->ANAC55(2)           ----------->GT1   ----------->HVH21            --------->ICU4 <---------YAB1 ----AtSPL8 <---------YAB1 <---------AHL20(2)                   <---------YAB1      -------->ATHB1   aacaaattcaaattttgatacaaaattagttatttgtatttgttgtgaccatttctattctacattttgtttgattattagttgaattattcttagttaa  6674700                           --------->TOE2(3)                      --------->ATHB12      --------->At5g28300                        --------->ICU4                      <---------ICU4       <---------ZAT6                            --------->YAB1                  <---------AHL20(2)       ----------->GT1                          --------->ICU4                 <---------AHL20(2)      <---------At5g28300                        <---------AHL20(2)                 --------->AHL20(2)     <-----------GT1                             <---------ATHB51             --------->AHL20(2)        <---------YAB1                               --------->AHL20(2)             <---------AHL20(2)      --------->YAB1                   ----------->GT1<---------ICU4             --------->AHL20(1)      <---------ICU4              --------->AHL20(2)<---------AHL20(1) ------------------------>ANAC81     <--------HAHB4           <----------DOF2   --------->AHL20(2) ---AHL20(2)<---------AHL20(2)      <---------YAB1         <---------ARR11(3)   --------->AHL20(1) -->AHL20(2)--------->AHL20(2)      <---------AHL20(2)     --------->ARR11(3)   <---------AHL20(2)   atagagcaaacaaattaaattaaatgatttcttaatctataattactgtaaatacttcaaacatcttttaaatagaaacaaataaaataattactaagac  6674800                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                     --------->AHL20(2)                        ------                                                     <---------ICU4                    <-----------HVH21                                    --------->AHL20(2)                                <----------DOF2                    <---------AHL20(2)              --------->AHL20(2)               <---------ANAC58     ------>ZmHOX2a(1)          <---------AHL20(2)  <---------AHL20(2)    --------->ANAC55(2)--------  ---------->ID1   --------->AHL20(2)             --------->YAB1     <---------ZAT6  <---------ANAC58   atttgtccttatataagtctaataaatgtgtgttttaattcaatacctccaaaaataatttcaaaaaactagagttactgaattggtgctttcacacggt  6674900                                                                                    --------->HSFB2a(1)                                                                                   ------>MYB83                                                                                 <---------MYB59                                                                                 --------->MYB46(3)                                                                                 <---------MYB111(1)                                                                        <---------MYB55(2)                                                                        --------->MYB46(3)                                                                        ------------>CBF                                                                       ------>MYB83------>MYB46(1)                                                                       ------>MYB46(1)                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58   <------------CBF                                               --------->ANAC46 -------->P -------ANAC58                                                  <-----------GT1  <---------MYB111(2) -------ANAC58                                                ----------->TBP    --------->AtMYB61 -------AtLEC2                     <-------TEIL             ----------->TBP <---------ATHB12 ----->ABI4(2)            <-----------HVH21      <---------ARR11(3)  --------->DEAR3(1)          <--- ----TEIL               ------->TEIL             --------->ARR11(3)  <---------ALFIN1         <------ --->At5g28300         <---------AtLEC2         --------->YAB1<---------AHL20(2)--------->MYB46(3) ->ANAC46         --------->ARR14(2)--------->YAB1 ------>ZmHOX2a(2) --------->AtMYB61        *TSS   gcatgcattgtattcacacctatatgcatgtcatatattcatggtctctatgatctcgctctatataaacaccacccaatcgaccaaccttcttctctga  6675000                           <<<<<<<<<TBF1                    <---------AHL20(2)                   <---------AHL20(2)                   --------->AHL20(2)                   <---------AHL20(1)               --------->AHL20(2)                         --------->ICU4               <---------AHL20(2)                       <---------ICU4              --------->AHL20(2)                     --------->YAB1             <---------HSFC1(2)           --------->AHL20(2)                      --------->ANAC58             --------->HSFC1(2)          --------->AHL20(2)                       --------->ANAC58             --------->HSFB2a(1)          <---------AHL20(2)                       --------->ANAC46            ------->TEIL      <--- ------YAB1<---------AHL20(2)          --------->MYB46(3) <---------ATHB51    <-----------GT1    ---- ---YAB1  <---------AHL20(1)  <<<<<<<<<TBF1 --------->WOX13(1)   <---------MYB46(3)   <---------LBD16   ttattttctcaaattatttaattaatttcttcttcttcatcaccaccaattacactcaaaattatggtgtttgcacatttgaaccttcttcggaagattg  6675100                                                    --------->ICU4                                                    <---------YAB1                                                  --------->YAB1                                   <-                                                 <---------ATHB12                                 ---                                               --------->WOX13(1)                                 ---                                            --------->ARR11(3)                                    ---                                           <---------CCA1(2)                            =============          <--------P                      <---------AHL20(2)   ---------->ID1           ------>ZmHOX2a(2)   <---------YAB1                        --------->YAB1     --------------->AtSPL8    <---------ARR11(3) ------ANAC46                           <---------YAB1<---------ARR11(3)              --------->ARR11(3) ----->ALFIN1      <---------GLK1(2) <---------ARR11(3)  <---------AHL20(2)   <----------DOF2   <----   tggggattataggttagtccagaattttgacatctacaagttattatatctatcatgatttttttgtcccttcttcttaactttggatgatcttgtttgc  6675200                                                                                            <--------                                                                                            ---------                                                                                            <--------                                    --------->TOE2(3)                                       ---------                                   --------->ANAC58                                         <--------                                   --------->ANAC58                        --------->LBD16  <--------                                  ------>MYB83                            <---------HSFB2a(2)                                  ------>MYB46(1)                  <---------AHL20(1)      <-------TEIL  --------->HSFC1(2)             --------->MYB52(1)                --------->AHL20(1)      <---------  <---------HSFC1(2)            --------->DEAR3(1)                 <---------AHL20(2)     --------->CCA1(2) -----ZmHOX2a(1)               --------->MYB46(3)                  --------->AHL20(2)    --------->ARR14(2) ------>ANAC58                 <---------MYB52(2)             <---------AHL20(2)         --------->ARR11(1) ------>ANAC46              ---------->ARF1         <---------ARR11(3)    --------->HSFB2a(2)     --- ------>ANAC58          <---------ANAC58           <---------CCA1(2)<---------AHL20(2)   <---------ARR14(2) =====HOX2a_HOX2a       <---------ANAC58--------->ICU4   <---------YAB1   <---------HSFC1(1)<-------- -----AtLEC2<----------DOF2<-----------HVH21  <-----------GT1 --------->AHL20(2)     ---------->DOF2   aggaaacttcatcgctctatgtctgttcttgtcaccaacgtaagtattttgctatatctatgatttaaataaaattccagaaacaatgaaagatacgtga  6675300                                                                                                -----                                                                                               <-----                                                                                               ------      <-------TEIL                                                                            ------- -ANAC46                                                            <-------TEIL              <------ >ANAC55(2)                                                       ------->MYC3                ------- -ANAC55(2)                                                       ------->MYC2                <------ -->GT1--------->YAB1                      ------>MYB46(1)        <-------MYC3   ==================== -ANAC55(1)                              <---------MYB59          <-------MYC2   ------>ZmHOX2a(1) -ANAC58                               >>>>>>>>>MYB2         <-----------GT1     ==================== --------------TaNAC69(2)    --------->TOE2(3)              <-----------GT1<-------TEIL       ------- ------->DOF2             <---------CCA1(2)------>MYB83    --------->AHL20(2)  <---------ICU4 <------ -ANAC58       ----------->GT1  ---------->DOF2          ------->TEIL<---------AtLEC2     ---------->DOF2   aaaagagattcataaaaacgaaaatcgtatttcttaaagaaaaccaaacttgtttcatgaatttaacacatgcatggttcatcctgactactgaaagatc  6675400   --------->AHL20(1)   <---------AHL20(2)   --------->AHL20(2)                                                                          <----- ->ZmHOX2a(2)                                                                                <------- -ZmHOX2a(2)                                                                                --------- --->CCA1(2)                                                                                <-------- -->ARR14(2)                                          --------->YAB1                     --------->AHL20(2) ---ARR11(3)                              <----------DOF2--------->YAB1               --------->YAB1 -->AGP1                        --------->YAB1   <---------ANAC46                    ------>ZmHOX2a(1) ---ARR14(2)                 <----------DOF2     ----------->GT1                  ---------->ID1 =HOX2a_HOX2a              <---------At4g35610 <---------ZAT14                   <-----------GT1 ==HOX2a_HOX2a          --------->ZAT14   =========================================================== -->ARR11(3)            <---------ZAT14   --------------->AGL15              <----------DOF2<-------- ---AGP1    <-----------GT1--------->At4g35610 --------->ZAT14----------->GT1<---------DAG2 ---------   tgaaattttttgtttttcattctcactgcagctttcaaaattttctttgtgtagtataatcacaatgtgaaaattgatacttttttcctcataatataat  6675500  Previous    Next  AGI:  At4g10850.1    Description:  nodulin MtN3 family protein. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT1G66770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69485.1); contains InterPro domain MtN3 and saliva related transmembrane protein (InterPro:IPR004316) Range:  from: 6674994    to: 6676977    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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