Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <-------GAMYB                            --------->MYB111(2)                            --------->MYB52(2)                            --------->MYB55(2)                            <---------MYB46(3)                          <---------MYB52(1)                  <---------AHL20(2)                  <---------AHL20(1)                  --------->AHL20(2)                  --------->AHL20(1)                 <---------AHL20(2)             <---------AHL20(2)  <---------ARR11(3)    <---------YAB1                                                            ---  --------->ARR11(3) --------->GLK1(2)  <----------ID1                                  ----------->GT1 -------->ICU4   --------->AHL20(2)     ----------->GT1  ------>MYB83       --------->TOE1(3) ------- ---DOF2     --------->AHL20(2)       ---------->DOF2    ------>MYB46(1)    --------->TOE2(3)--------   taaagatttactcatataaataaattctgtttgttggaaaaaaagaaaaaaaaaaaacctacattctaaatactgaaaccataaaccatatggtaaaaag  6656100                                                               ----------->GT1                                                           --------->AHL20(1)                                                           --------->AHL20(2)                                                           <---------AHL20(1)                                              --------->ARR11(3)                                    -                                              <---------ARR11(3)                                 <---                                          ---------->DOF2  <---------AHL20(2)              <--------- -------->GT1                       --------->YAB1     <---------AHL20(2)                  <---------DAG2 -->DAG2                         --------->ANAC46--------->AHL20(2) XXXXXXXXXXXXXXXXXXXX>MIR1886.2<-- -->DOF2                       --------->ANAC46  <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tggataaatgctcaactatctccatttcaatatacacatcataaaaaagatttatattcaatttattgtaaaatgaaaacttagattgcattactttttt  6656200                                                                                                 ----                                                                                                 ----                    <-----------GT1                                                       -----------                   --------->AHL20(2)                                                    --------->ZAT6               --------->AHL20(2)                                                        ------------ -------->ZAT6 <---------AHL20(2)                    <<<<<<<<<RAP2.2           <---------YAB1    <--- --------GT1  <---------AHL20(2)             <---------AHL20(2)             --------->GLK1(2)    <--- -DOF2        --------->AHL20(2)            --------->AHL20(2)       --------->At4g35610--------->ZAT14 ---------GT1 <---------AHL20(1)        <-------TEIL<---------TOE2(3)<---------At4g35610<---------ZAT14   taactctcttctctaatttaatttactatctaaatttgtgagttcataaaattttagattgagaacaattcatcagaaattctgattcagaacagtacaa  6656300      --------->ANAC58      --------->AtLEC2                        --------->bZIP60(1)  <-----------HVH21                           <---------bZIP60(1) ----->ARR14(2)                              ---------->ID1 ----->ARR11(3)                          <---------ANAC55(2) >GT1 --------->ANAC58              --------->WOX13(1)        --------->GLK1(2)       <---------ANAC46 --->AtSPL3                  --------->ARR11(3)               --------->ARR11(3)      <---------ANAC58 ------ARR14(2)              <---------ARR11(3)<-----------TGA1              ---------->ID1    ------ --------ARR10         ----------->GT1   --------->ANAC55(2)  <---------ARR11(3)      <---------ANAC58   atcttgtcatgcaaacttatctatcttgtaaaatctatctatcacttgtcgtcactaagtacaaaatctattttagtttgttttttttgtgtgtaagaaa  6656400                                                                                    -------->P                                                                                  <---------MYB111(1)                                                                                  <---------MYB52(2)                                                                             <---------ANAC55(2)                                                                             --------->ANAC55(2)                 --------->WOX13(1)                                          --------->ANAC58              --------->GLK1(2)            ----------->HVH21                 --------->ANAC46         --------->AHL20(2)         --------->ANAC46           --------->TOE2(3) --------->HSFC1(2)         <---------AHL20(2)       ----------->RAV1(1)     ------------>CBF   --------->ANAC58        --------->AHL20(2) --------->AHL20(1)    <---------MYB52(1)    --------->AHL20(2)     <---------AHL20(2)    <---------ARR11(3)    --------->DOF5.7(2) --------->TOE2(3)  <---------MYB52(1)    <---------AHL20(2)------------>CBF--------->ANAC46   ------>ZmHOX2a(1) <-----------GT1     <----- ---->DOF2--------->YAB1   <---------AHL20(1)   <-------GAMYB  >>>>>>>>>RAP2.2  <-----------ARR10   agtttttttatttaataatctatcaccaatattttccaacacaacatgaccgttatctcctccaatctaaaacttaattacgaaactacccttacctctt  6656500                                                           ------>NtERF2                                                           --------->LBD16                                                          --------->ANAC46                                            <------ZmHOX2a(2)                               ------>ZmHOX2a(2)          --------->ANAC58                             <---------AGP1--------->ARR14(2)                             --------->ARR11(3)           --------->ANAC58                 =====================HOX2a_HOX2a      --------->ARR14(2)                 ------>ZmHOX2a(1) ---------->DOF2     <---------ARR14(2)            *TSS ==================================HOX2a_HOX2a     ----------->HVH21       <---------ARR11(3)       ------>MYB46(1)    <---------WOX13(1)      <---------CCA1(2)         ------>MYB83                       ----------->RAV1(1) -----DOF2--------->O2<---------ALFIN1     <---------ARR14(2)                     <---------ALFIN1   tcactgactgactcgtctccttctccacttggatctcaaaagtccgatccaaaaccaaatccgccataactctctctctctctcccacttcccacagaga  6656600                                                                  --------->REM1(2)                                                                 --------->ALFIN1                                                                 <---------REM1(1)                                                               <---------ANAC46                                                               <---------ANAC58                                                               <---------ANAC55(1)                                                               --------->O2                                                               <---------ANAC55(2)                                                            <---------MYB52(1)    --------->ANAC55(1)                                                           <---------At4g35610    --------->ANAC55(2)                                                           --------->At4g35610    <---------ANAC55(2)                                                           ------>NtERF2<---------SPL7                                                          --------->RAP2.6(2)     --------->ANAC58                                                          --------->RRTF1(3)      --------->ANAC46            <------NtERF2                                 --------->RAP2.3(2)     --------->ANAC58           --------->ANAC58                               --------->DEAR3(1)   <---------ARR14(2)           ------>NtERF2                                 --------->RAP2.3(1) --------->ANAC46           --------->ANAC58                             ------>NtERF2 ---------------------->TaNAC69(1)           --------->ANAC46                             --------->ABI4(1)  <--------------OsCBT          <---------ATERF1(2)                          --------->ANAC46--------->RAP2.6(2)          --------->ATERF1(2)                          --------->DEAR3(1) --------->SPL7       --------->ANAC46   <---------O2              <---------ALFIN1  --------------->AtSPL8     --------->YAB1       --------->O2           --------->ARR14(2)   --------------->AtSPL3        -    <-------TEIL     --------->O2                <---------ARR14(2)  ----------------------->TaNAC69(2)   xxxxxxxxxxxxxxxx>smallRNA(s)             ------>ZmHOX2a(1)  <---------ANAC58--------->ARR14(2)  --   gacacattcatgccagcaatgccaggtctcgtctcagtcaaaactccttccgatacaccgccgctacgtgtagccgtaccagacacgcaacctctctcaa  6656700                                                                                    --------->ARR14(2)                                                                         --------->DEAR3(1)                                                                         <---------ATERF1(2)     <---             --------->At4g35610                                         --------->ATERF1(2)     ----        --------->GLK1(1)                                                --------->DREB2C(2)     <---        <---------GLK1(1)                                             <---------ALFIN1          <----    ------>NtERF2                                                    --------->MYB46(3)       -------    --------->LBD16                                                 <------ZmHOX2a(2)       -------->P    <------NtERF2                                                  --------->ARR11(3)       ------>MYB83   --------->DEAR3(1)                                              <---------ARR11(3)       ------>MYB46(1)   --------->RAP2.3(2)                         <------ZmHOX2a(2)   --------->AGP1   <---------GLK1(2)   --------->RAP2.6(2)                 --------->AtMYB61      ------>MYB83--------->LBD16  <---------ALFIN1  <------NtERF2                     --------->REM1(1)         ------>MYB46(1)   ---------->DOF2 <---- ------>NtERF2                      --------->ANAC46  --------->AtMYB61 <---------LBD16    --------->MYB52(1) <---------ATERF1(1)               --------->ZAT14   --------->MYB46(3)--------->MYB52(1) --------->MYB46(3) -------->ANAC46                ======================HOX2a_HOX2a  <---------ARR14(2)     <---------ALFIN1 ------->MYB46(3)               ------>ZmHOX2a(1)  --------->ANAC46--------->ARR14(2)<---------GLK1(1)   acccgccgcgaactccgatgaagaaaaccccttcctctacaccatctcgatccaaaccatcaccaaatagatccaccggcaaaaaagattccccaaccgt  6656800             --------->At4g35610             ------>NtERF2                                     <----------DOF2            --------->DEAR3(1)                         ------>ZmHOX2a(2)           --------->ERF1                              ===============HOX2a_HOX2a          <---------At4g35610                         --------->GLK1(1)          --------->ABI4(1)                           <---------GLK1(1)          --------->At4g35610                         ================HOX2a_HOX2a          --------->ZAT14                             <------ZmHOX2a(2)         --------->DEAR3(1)                          --------->AGP1      <---------ALFIN1           <------ZmHOX2a(2)   <---------ARR14(2)      --------->AtMYB61          =====================================HOX2a_HOX2a     --------->MYB46(3)         <---------ARR14(2)   --------->ARR14(2)                --------->ANAC58    ------>ZmHOX2a(1)      <---------DEAR3(1)        <-----------ARR10                 --------->ANAC58    ====================================HOX2a_HOX2a  --------->ARR14(3)             ----------->TGA1 ------>ZmHOX2a(1)         <---------ETT(2)          <---------ARR14(3)--------------->AGL15 ------ARR14(2)            --------->DEAR3(1)        --------->ARR11(3)--------->HSFB2a(2) ----->ARR14(2)         <---------O2                 <---------ARR11(3)<---------------AGL15 ------ARR11(1) <---------RAP2.6(3)                  <---------AGP1   ----------------->AGL3 -----ARR14(1) --------->RAP2.6(2)             --------->GLK1(2)      <-----------------AGL2   <----- >GAMYB --------->ANAC46--------->O2        <---------ARR11(3) ------>ZmHOX2a(1)    ----------->HVH21 -----CCA1(2)<---------At4g35610--------->ARR14(2)  <---------CCA1(2) <-----------------AGL3   <-----   atcctcctccaccgcagccgtaatcgacgtcgacgatccatctctagataatccagatctcggtcctttccttctaaaattagctcgtgacgctattgct  6656900                                                                         <---------MYB52(1)                                                                        <-------GAMYB                                                                       <---------MYB46(3)                                                                       --------->DEAR3(1)                                                                      <------NtERF2                                                                    --------->RRTF1(3)                                                                    --------->RRTF1(2)                                                                    --------->DEAR3(1)                                                                    --------->RAP2.3(2)                                                                    <---------DEAR3(1)                                                                   --------->DEAR3(2)                                                                   --------->RRTF1(1)                                                                   --------->RAP2.6(1)                                                                   --------->ATERF1(1)                                                                   --------->ORA47(2)                                                                   <------NtERF2                                           <---------MYB52(2)      --------->DEAR4(2)                                      --------->ANAC58             --------->RAP2.3(1)                                      --------->ANAC58             --------->ERF1                                      --------->ANAC46            <---------ATERF1(1)                                     --------->LBD16              ------>NtERF2                                   =======================HOX2a_HOX2a--------->ABI4(1)       <-------                                   ------>ZmHOX2a(2)              <---------RRTF1(1)        <--------                                  ========================HOX2a_HOX2a------>NtERF2          ---------               ---------->DOF2    <------ZmHOX2a(2)              <---------RAP2.3(2)       <---------MYB52(1)             >>>>>>>>>MYB98      --------->ARR14(2)              <---------ANAC58         --------->LBD16           ------>ZmHOX2a(1)     <---------ARR14(2)              <---------ANAC58  <----------TaMYB80          <---------MYB59    <---------ANAC55(2)            <---------REM1(1)   ------>NtERF2--------       <---------ARR11(3)    --------->ANAC46      <----------DOF2<---------RAP2.3(1)    --------->LBD16  <---------REM1(1)          --------->ANAC55(2)   ------>ZmHOX2a(1)--------->RAP2.3(3) <---------LBD16 ----ANAC58===============================HOX2a_HOX2a       <-----------RAV1(1) --------->LBD16<----- ----ANAC58==============================HOX2a_HOX2a       --------->ARR11(3)  --------->DEAR3(1)   tctggtgaaggtcctaacaaagcattagattacgcgatccgagcaactaagtcctttgagagatgttgcgccgccgttgctccgcctattcccggtggta  6657000  Previous    Next  AGI:  At4g10840.1    Description:  kinesin light chain-related. similar to kinesin light chain-related [Arabidopsis thaliana] (TAIR:AT3G27960.1); similar to hypothetical protein OsJ_004937 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21454.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69484.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14399.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 6656512    to: 6659261    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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