Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ARR14(2)                           -------->ATHB1                              --------->LBD16                           --------->ATHB12                           <---------ANAC58                           --------->YAB1                             <---------ANAC55(1)                           <---------ICU4                             <---------ANAC58                  --------->YAB1                                      <---------ANAC46    <---------TOE2(3)     <---------ATHB12                            --------->ANAC55(2)         <-- <---------AHL20(2)  --------->YAB1        <---------ICU4         <----------DOF2      ---------->DOF2 -------AHL20(2)  <---------ICU4          ------>ZmHOX2a(1)  <<<<<<<<<TBF1     ------->TEIL      <--- ----->AHL20(2)--------->WOX13(1)<---------GLK1(2)     <---------At4g35610   <-------TEIL        <---   taaataaacgttgtaatccatcatcacaatcattcgattctctcctaattcccttgctgcttcttcttctttccgtatgtgcatcttcttaaagctctgg  6618300                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  <--      ---------->DOF2                                                                             <-- --------DOF2                                                                             <----------DOF2 ------ANAC58  --------------->AGL15                                                      ----------- ------ANAC58 <-----------------AGL1                  ---------->DOF2         ------>ZmHOX2a(1)  <---   ctttctaacaaagcattccagtttttgcaagttaatcgcattgctctcaaacaatgtaaaggaaccctagagacaatgtcctctactagttcctttggaa  6618400               ------>ZmHOX2a(1)               <---------YAB1           <---------SPL7          <---------ANAC58          <---------ANAC58 ----------->HVH21                                                                      ----------->GT1 ------->CCA1(2)                                                                       --------->DAG2 ------>ARR14(2)                                                                 ---------->DOF2 ------>ARR11(3)                                                        --------->HSFB2a(2) -------ARR11(3)                                                        <---------HSFB2a(2) -------ARR14(2)                                   <----------DOF2<---------TOE2(3)   ---------->DOF2 ---------->WRI1                                  <---------DAG2---------->DOF2--------->ANAC58  ---- ------HSFB2a(1)                      <---------KAN4(2)      --------->YAB1    --------->ANAC58  ----   gatttgacattgtcgtcctcattgtgtttttgatacaagggatgttcagaaaccttttgcgactcataaaggttgtagaacaagaaagaaaagtagaaac  6618500                                <-----------ARR10                       <-----------GT1                                --------->GLK1(2)                 <---------RVE1(1)                               <---------GLK1(2)                  <---------CCA1(1)                    ---------->DOF2                              --------->ARR11(3)                   <---------AHL20(2)               ---------->DOF2   <-----------GT1 ----->TOE2(3)    --------->AHL20(2)        <----------DOF2      <---------ARR11(3)         --------- ----->TOE1(3)    <---------AHL20(2)        <---------DAG2      --------->YAB1   ------>ZmHOX2a(1)   cctaaattaagttgggctaattaaaaggcttcagaatctagtcgggctttttgtaaaagccctaaatgatattttctcgtttcctaagaaaaaacagcat  6618600                      --------->ANAC58                      --------->ANAC58                      ---------->DOF2                   --------->ARR14(2)                     --------->ANAC46                   <---------ARR14(2)        <---------ANAC58 --------->ANAC58                 --------->LBD16             <---------ANAC58 --------->ANAC58       <---------ALFIN1                --------->LBD16  --------------->AtSPL8   --------->ANAC58        <-----------GT1               --------->HSFB2a(2)      <---------ICU4    --------->ANAC58     <----------DOF2   <---               <---------HSFB2a(2)     --------->ICU4  --------->TOE1(2) <----------DOF2         ---- -------------->TaNAC69(2)       <---------------AtSPL8<---------SPL7   *TSS ---------->ID1 <--------   gcagtctacgtttctatcccgaaaacgctaataagtgagtactaatttcgttttggtcatacgaaagcaaaaacactttgtcttttaccacttcttcgat  6618700                                                    <-----------HVH21                                                   --------->ANAC46                                                <---------WRKY18(1)                                               ----------->HVH21                                              <-----------HVH21                                             <---------TGA1a                                             --------->TGA1a                                             --------->O2                                             <---------O2                                            <------NtERF2                                           ------>NtERF2                                           --------->ABI4(1)                                          --------->RRTF1(2)                                          --------->RAP2.3(3)                                          --------->DREB2C(2)                                          --------->RAP2.3(2)                                          --------->RRTF1(3)                                          --------->RAP2.6(2)                                          --------->DEAR3(1)                                          <---------DEAR3(1)                                         --------->RRTF1(1)                                         --------->RAP2.6(1)                                         <------NtERF2                                         --------->DEAR4(2)                                         --------->ATERF1(1)                                         --------->ORA47(2)                                         --------->ERF1                                         --------->RAP2.3(1)            --------->ANAC46            <---------ATERF1(1)           <---------LBD16              --------->LBD16          <---------At5g28300           ------>NtERF2        --------->ZAT18                --------->ANAC46        --------->ZAT14                <---------ALFIN1             --------->bZIP60(1)        <---------ZAT14 <---------ALFIN1--------->ABI4(1)           <---------bZIP60(1)    <---------TOE1(2)   --------->DEAR3(1)--------->ATERF1(2)    ----------->HVH21 ------HSFC1(2)        <------NtERF2   --------->DEAR3(1)      ----------->GT1                      - ----->HSFC1(2)       ------>NtERF2   --------->MYB46(3)--------->At4g35610                      ---- -------------WRI1   <---------ALFIN1 <---------LBD16   <---------At4g35610                  --------   acttcccaagttcaccgcaatggccaccgcttcaatcttccccgccgccgtgaccgtcaccagagatgtgacatctcttcttaatccatcttctctgata  6618800                                              <---------MYB52(1)                                  ---           <---------ARR11(3)             ------>ZmHOX2a(1)      --------->TOE1(3)               <---          <---------ICU4              --------->ARR14(2)         --------->TOE2(3)              -----       --------->YAB1                 <---------ARR14(2)  --------->LBD16                       -----      <---------ATHB12          --------->WOX13(1)       --------->ANAC46                      ------      --------->ICU4        --------->At4g35610          --------->ANAC58                     ------- ---------->GT1     ---------->DOF2--------->YAB1        --------->ANAC58                     <------ ----->GLK1(2)   ------>ZmHOX2a(1)<---------ATHB12       --------->LBD16                  --------->At4g35610 ->YAB1<---------ICU4       <---------At4g35610         <---------LBD16                   <---------At4g35610   atcggaaaatcattatctccttcaaagttcagctcaatcaaatcctccgtttcattttcccgcaaaaccctaactccaattcgatactcttcatctcccg  6618900                     --------->ALFIN1                    --------->LBD16                   --------->DEAR3(1)                 --------->ABI4(1)                ------->GAMYB                <---------ALFIN1                --------->DEAR3(1)               <------NtERF2               --------->ATERF1(1)               --------->DEAR4(2)               --------->DEAR3(2)               --------->MYB46(3)              <---------ATERF1(1)              --------->ABI4(1)              ------>NtERF2             --------->AtMYB61             <---------ALFIN1             --------->DEAR3(1)           <-----------HVH21           ------>NtERF2          --------->ANAC58          --------->ANAC58          --------->RAP2.6(2)          --------->ANAC46 <---------ATHB12------>NtERF2 <------ZmHOX2a(2) <---------ANAC46           --------->ARR14(2) ------>DEAR3(1)--------->DREB2C(2)      <------ZmHOX2a(2)               <---------ANAC46 ---NtERF2------->GAMYB             ------->TEIL                       --------->REM1(2) ---->LBD16<---------ATERF1(1)   --------->ANAC58                     --------->ALFIN1 ->NtERF2--------->MYB46(3)      --------->ANAC55(2)                 --------->LBD16 --->ANAC46--------->LBD16       --------->ANAC58                   <---------ANAC46 -->MYB46(3)--------->MYB46(3)   <---------ANAC55(2)      --------->ARR11(3)                       <- ---LBD16<---------MYB55(2)   <------ZmHOX2a(2)          <---------GLK1(1) <------ZmHOX2a(1)   <-----   ccgatcactcacccgccaccgccgtggaagcgatcacgaatcgatccaaaacctccttgaaatctcgtctccgtggaggagaaactctctacggtctctt  6619000                                             --------->ARR14(2)                                             <---------ARR14(2)                                            <-------GAMYB                                           <---------DEAR3(2)                                           <---------MYB46(3)                                        ------------>AtMYB77                                       --------->TGA1a                                       <---------TGA1a                                       --------->O2                                       --------->ANAC58                                       <---------O2               <---------DDF1  <---------At4g35610               ------>NtERF2 <------ZmHOX2a(2)               <---------RAP2.6(3)     =============MYC_MYB               ----------->RAV1(1)     =============MYC_MYB                                      ----              --------->At1g77200      --------->ANAC58                                      --------              --------->RAP2.3(3)      --------->ANAC46      <-------GAMYB                 <---------LBD16              <---------ETT(1)------>ZmHOX2a(2)             <---------MYB46(3)            --------->MYB52(1)              --------->DEAR3(1)  --------->At4g35610      <------NtERF2          --------->LBD16<---              --------->DREB2C(2) <---------At4g35610    <---------DEAR3(1)      <---------HSFB2a(2)       ==============================HOX2a_HOX2a      <---------ANAC58           --------->HSFB2a(2)       ------>ZmHOX2a(1)    <---------ARR11(3)        --------->ANAC55(2)       <---------LBD16  <---       =============================HOX2a_HOX2a       <---------ANAC58          <---------HSFB2a(2)<- ----------GT1--------->DEAR4(1)  --------->ZAT2      <---------ANAC55(2)     --------->PCF5<-------- -----DOF2   --------->RAP2.3(1)  <---------ZAT2<---------YAB1               <-----------HVH21<------   tttactctccttctcgccgacattagccgagatcgctgctcacgccggttacgattacgtcgtcgttgatatggaacatggtcccggaggtataccggaa  6619100                               <------NtERF2                              --------->LBD16                             --------->RAP2.6(2)                            <---------LBD16                            --------->ATERF1(1)                            <------NtERF2                             ----------->RAV1(2)                            --------->RAP2.3(1)                       --------->ZAT2                           --------->ABI4(1)                          <---------ZAT2                           ------>NtERF2                             ------>MYB46(1)                           <---------ATERF1(1)                       -------->P                          --------->RAP2.3(2)                       --------->MYB55(1)                          --------->RAP2.3(3)                      --------->DEAR3(1)              <-                          <---------ATERF1(2)                      <---------MYB111(2)       ------>ZmHOX2a(2)                          --------->DEAR3(1)                       <---------MYB111(1)      <------ZmHOX2a(2)                          <---------DEAR3(1)                       --------->AtMYB61        ---------                         --------->RAP2.3(1)                       <---------MYB55(2)      --------->ARR11(3)                         --------->DEAR4(2)                        <---------MYB46(2)      --------->AGP1 ----->HSFC1(2)          --------->RRTF1(1)                        --------->MYB46(3)      <---------ARR14(2) ->LBD16                 --------->ERF1                           --------->MYB46(3)       --------->ARR14(2) ------HSFB2a(1)         --------->ATERF1(1)            --------->LBD16                    <---------AGP1 ------HSFC1(2)          --------->ORA47(2)            <---------HSFB2a(2)           --------->ARR11(3) ---------DOF2         --------->ANAC46                --------->HSFB2a(2)        --------->DAG2   -- -HSFB2a(2)          ---------->DOF2                 --------->MYB52(1)--------->TOE2(2)   <---------ARR11(3) ---MYB52(1)    <---------ARR11(3)    --------->ANAC46<---------LBD16------>MYB83---------->DOF2  ---   gctttggattgtattcgagctcttaacgccgccggaacatcagccattctccgattaccggaaaactcaccaacctgggctaaaaaagctctagatctag  6619200  Previous    Next  AGI:  At4g10740.1    Description:  F-box family protein. Identical to Putative F-box protein At4g10740 [Arabidopsis Thaliana] (GB:O82488); similar to type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein [Arabidopsis thaliana] (TAIR:AT1G65990.1); similar to predicted F-box and bHLH containing protein [Overexpression vector pFC12860OE] (GB:ABK41847.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 6617139    to: 6618422    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g10750.1    Description:  HpcH/HpaI aldolase family protein. similar to ALL1 (ALDOLASE LIKE), carbon-carbon lyase/ catalytic [Arabidopsis thaliana] (TAIR:AT4G24080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62931.1); contains InterPro domain HpcH/HpaI aldolase; (InterPro:IPR005000); contains InterPro domain Pyruvate/Phosphoenolpyruvate kinase, catalytic core; (InterPro:IPR015813) Range:  from: 6618672    to: 6619935    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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