Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ANAC58                                                                               <---------DEAR3(1)                                                                               --------->ANAC58                                                                              --------->SPL7                                                                            <---------SPL7                                                                       <---------ZAT2                                                                       --------->At4g35610                                                                       --------->HSFC1(2)                                                                       <---------At4g35610    <------ZmHOX2a(1)                             ---------->DOF2      <---------HSFC1(2)   ----------->GT1                               --------->AHL20(2)    <---------HSFB2a(1)  --------->ANAC58                       --------->TOE2(3)        --------->ANAC58  --------->ANAC58                     <---------ARR11(3)         --------->ANAC58 --------P   <-----------GT1           --------->ARR11(3)        --------->SPL7--------->ANAC46 ------TOE2(3)                      <---------AHL20(2)          --------->MYB52(1) ------------AtSPL8                 --------->AHL20(2) ---------->DOF2 --------->HSFB2a(1)   gggtaaggaaaaaaaaaaccacttcgaaatagaatcaataaaatctcaaaattaaagcaaagacgcgaacggaagcttcgcacggcgaaaccctagaaat  6606000                                        --------->At4g35610                                        <---------At4g35610                                    --------->ANAC46                           --------->ANAC55(2)                           <---------ANAC58                           <---------ANAC58      ----------->GT1      <---------ANAC55(1)                          <---------ARR11(3)      --------->ANAC58     <---------ANAC55(2) --------->YAB1         <---------YAB1      --------->ANAC58--------->WOX13(1)<------NtERF2    ------>ZmHOX2a(2)   ggaagaacaagaaaaaacaaaaatcaattacttgtctaacgcagcgaaatcaaaatggatcgagttaagaacatgattttaaacgaagaatcaaatcgaa  6606100                 <-----------GT1               --------->AHL20(2)               <---------AHL20(2)   --------->AHL20(2)     --------->DAG2  --------->ANAC58              <---------TOE2(2)         --------->DAG2  --------->ANAC46              <---------TOE1(2)        ---------->DOF2       ---------->DOF2  <----  --------->ANAC58           ----------->GT1      --------->GLK1(1)    ----------->GT1        -------   gaacacgaaaacgagatttaaacaagttgaatcgtagattaaaaacagtgagaaatcgaaaaagggggaagaacagaaaaatcaagcgaagagtttaccc  6606200            <------ZmHOX2a(1)                        --------->ANAC58           ----------->GT1                           --------->ANAC46          <---------------------WRI1                 --------->ANAC58        ------->GAMYB                               ------>NtERF2     --------->MYB52(1)                             --------->LBD16     <---------DOF5.7(2)                    --------->ARR14(2)    <---------WRKY38(1)                    <-------GAMYB   --------->DOF5.7(2)                   <---------RAP2.6(2)                    --------->DEAR3(1)  <-------GAMYB                          <---------DEAR3(1)                   --------->LBD16 <---------MYB46(3)                  ---------->DOF2<------NtERF2            <---------DEAR3(1) -------RAV1(2)              <----------DOF2<---------ARR14(2) ----------->GT1------>NtERF2  -------- ---------->AGL1         <--------P ---------->DOF2--------->RAP2.6(2)      <---------LBD16  <-------   agatggttaacggaggaaaataacaaggtagctttacacaaaggcggttttggccgcgaaacaagaagaaaaacaaactccggcgaggctctcttcgaga  6606300                                                          --------->LBD16                                                          ------>ZmHOX2a(1)                                                      --------->ARR14(2)                    <--------                                                     <---------GLK1(1)                  <---------AtMYB61                                                     --------->GLK1(1)               <---------YAB1                                                --------->ANAC58                     --------->ICU4                                                --------->ANAC46                   <---------At4g35610 ->HSFB2a(2)            <-----------GT1         --------->ANAC58--------->ALFIN1  <---------YAB1 --HSFB2a(2)       ---------->DOF2 ----------->GT1*TSS<---------ARR14(2)  <----------DOF2<---------MYB46(3)   gagaatggggagagagtaagcgaaagttaccaaagaatggtttttctaccaaggcatttcctgagagtggaacatacttttattctgatgatggtgggct  6606400                                                                                  <------NtERF2                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                --------->ALFIN1                                                                               <---------MYB52(1)                                                                               --------->ATERF1(1)                                                                             <---------ATERF1(2)                                                                             <---------DEAR3(1)                                                                             <---------DREB2C(2)     <---------ZAT6                                                          --------->ATERF1(2)     ----------->GT1                           <---------ICU4               <---------LBD16 -ZAT18                <------------CBF        ---------->DOF2   <---------AHL20(2)      <-----------GT1   tcgcttactgttaaacaccgatttgtattgggcttaacatagtgactaataaaggcccatgtactatatttttgttttgccggtggcccatttactatat  6606500                                           ------->GAMYB                       ----------->GT1    --------->MYB46(3)                       --------->YAB1    -------->P                ------>MYB83 --------->HSFB2a(2)                     <---------WOX13(1)--------->MYB46(3)          ------>MYB46(1)                  <---------YAB1      --------->At4g35610        --------->AtMYB61         ----------->GT1        --------->AHL20(2)               <---------MYB59<---------HSFB2a(2)   cgttgtcgattttgttatatatgaatgataaaaaataaacagcaaccgagctaattgaaccagaagaccaaaccaagtttatctcgaaattagaccgaaa  6606600                                                                                     --------->At4g35610                                                                                    <---------ARR11(3)                                                                                --------->ANAC55(2)                                                                                <---------ANAC55(2)                                                                              --------->CCA1(2)                                                                              <---------GLK1(1)               <------MYB83                                                  <---------ARR14(2)               ----------->GT1                     <---------ZAT6            --------->ARR14(2)               <------MYB46(1)             <---------GLK1(2)            <---------AtLEC2           <-           --------->ATHB12           <-----------GT1                  <-------TEIL --------->ARR11(3)   <-----------GT1                  --------->AHL20(2)                --------->AtLEC2------>ZmHOX2a(2)   cttgtttacaactcgattggtttaaaactcaagagaaattaaaccgatttttagtgtgacaatacattatacatgcatggatatgtgatctcaaatttgt  6606700                                                                                                   --                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                           --------->YAB1            --------->CCA1(2)                                   <---------YAB1            <---------AHL20(2)         <---------TOE1(3)                <----------DOF2      <---------ARR11(3)  --------->ZAT6 ---         <---------TOE2(3)            <-----------GT1          --------->ARR11(3)<-----------GT1  <-- ---------DOF2                    <----------DOF2    <----------ID1             <---------ZAT14   <--   gctttagttttaagatttgagagagagagttttcaacttttgacctttggctataactacaaaattatctttgtaaatgtagtttacagtatataatgat  6606800    <---------MYB59   --------->ANAC55(2)   <---------ANAC55(2)  <-------TEIL --------->GT1                              <----------DOF2 -->YAB1          --------->DAG2            <---------DAG2 -->ATHB12       ---------->DOF2      <---------ICU4 ---ICU4      --------->YAB1         <---------YAB1              <---------------AGL15 ->HAHB4     <---------YAB1        --------->YAB1                --------------->AGL15 ->ICU4  --------->TOE2(3)         <---------ICU4               <---------ANAC55(2) --YAB1  --------->YAB1            -------->HAHB4               --------->ANAC55(2) ------------>AtSPL3              <---------ATHB12<---------AHL20(2)       ----------->GT1  --------- -------------AtSPL3              --------->ICU4 <---------AHL20(2)--------->ATHB12         <-------- -------------AtSPL8    <---------TOE2(3)<-----------GT1       <-----------------AG       ---------->DOF2   gaggtacataaccatattataaagttaatgaagtaaatgattatcactttttttatttgcaaaatcacttaattgggaagtgatttctcaaaaaaagaaa  6606900  Previous    Next  AGI:  At4g10710.1    Description:  SPT16 (GLOBAL TRANSCRIPTION FACTOR C); metalloexopeptidase. Identical to FACT complex subunit SPT16 (SPT16) [Arabidopsis Thaliana] (GB:O82491); similar to GTC2 (GLOBAL TRANSCRIPTION FACTOR GROUP C2) [Arabidopsis thaliana] (TAIR:AT4G10670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64798.1); similar to global transcription factor group C 102 [Zea mays] (GB:NP_001105557.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64799.1); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994); contains InterPro domain FACT complex subunit Spt16p/Cdc68p (InterPro:IPR013953); contains InterPro domain Region Range:  from: 6601985    to: 6606350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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