Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ARR11(3)                                               <---------ARR11(3)                                               --------->ARR14(2)                                               <---------ARR14(2)                                               <-----------ARR10                                               --------->GLK1(2)                                          ----------->GT1                                         ----------->GT1                                       ---------->DOF2                                   --------------->AGL15                                   <---------------AGL15                                            <                                  ----------------->AG                                           <---                                  <-----------------AGL1                                       ------                                  ----------------->AGL2                                      <------                                  ----------------->AGL3                                      -------                                  <-----------------AGL3                               --------->YAB1                                  <-----------------AGL2                              <---------ATHB12                                  ----------------->AGL1                            --------->WOX13(1)          <------ZmHOX2a(2)       <-----------------AG                    <---------ICU4 --------->ANAC58         --------->ARR11(3)    <---------ARR14(2)                       --------->ANAC58 --------->AtLEC2 --->MYB46(3)                  --------->ARR14(2)                       --------->ANAC58 --------->ANAC58   atcaaacaatagatcaagactatccaaaacacagataccaaaaaaggaaaatctacacatagatttgaacagagaagcattacattcaatcatgcaatga  6527800                        <------ZmHOX2a(2)                       <---------ARR11(3)                       --------->ARR11(3)                       <---------ARR14(2)                       --------->ARR14(2)                                    --------->ANAC58       <                   ---------->DOF2                                      --------->YAB1  --------->MYB52(1)               <-------TEIL                                             <---------ICU4<---------MYB52(2)             --------->ARR14(2)                                        <---------YAB1--------->ANAC55(2) ---------YAB1--------->CCA1(2)                                      --------->YAB1  --------->ANAC58 ------YAB1  <---------ARR14(2)                                    <---------ARR11(3)--------->ANAC58 --->YAB1    <---------GLK1(2)      --------->ANAC58        --------->ZAT14  --------->ANAC58      <- ---ATHB12 <---------YAB1           --------->ANAC58  --------->YAB1<------ZmHOX2a(2)<---------ANAC55(2) -->ICU4<------ZmHOX2a(2)------>ZmHOX2a(2)   <-------TEIL   <---------ZAT14  <---------ANAC55(2) ----   tgctaattggatcaagattcacaaagatcggaacagagaagcattgattcatggaatgatactaaactggatcatcatcaagtaagtaagtaacgagaga  6527900                                                            <---------At4g35610                                                <---------GLK1(2)                                 ---                                                <---------ARR14(2)                               ----       <---------At4g35610                      --------->ARR14(2)                        <------ZmHOX2a(1) ----------DOF2                             ------>ZmHOX2a(1)                          <-----------RAV1(2) --------DAG2              <---------ANAC58--------->TOE1(2)<---------ZAT2  <---------MYB52(1) ------ ----->GLK1(2)             <---------ANAC58--------->TOE2(2)--------->At4g35610       ------>ZmHOX2a(1)   accttttagagatgacaaaatacaagttgccttgtttcaaattatcctccgattcgctagtaagctccgatacaatccgtttctcttcctcaggagtaaa  6528000                                                                    <---------ALFIN1                                                                   <------NtERF2                                                                 --------->RAP2.3(3)                                                                 --------->RAP2.3(2)                                                                --------->ATERF1(1)                                                               <---------ATERF1(1)                                                           --------->ALFIN1                                                  --------->At4g35610         --------->ANAC58                                                  <---------At4g35610         --------->ANAC46                                             ------>ZmHOX2a(2)--------->ARR14(2) -------->GT1                                =======================HOX2a_HOX2a ----->DAG2                                <---------ARR14(2) <---------ARR14(2)            --------- ---->DOF2      <---------MYB52(1)         --------->ARR14(2)<------ZmHOX2a(1)--------->ANAC58   aggcaaatcacagactccgttttctaacatgaaatcggaattagggatcgtcatcttcgaagaggagcccccaatttcaaacgaaatcagagagaatttg  6528100                                                            --------->ARR14(2)                                                          <------MYB83                                                          <------MYB46(1)                                                        <--------P                                                       <---------ANAC46                                                       <-------GAMYB                                                       <---------ANAC58                                                       <---------ANAC58                                                      --------->MYB55(2)                                                      --------->MYB52(2)                                                      <---------MYB46(3)                                                      --------->ATHB12                                                      <------MYB83                                                      <------MYB46(1)         <---------TOE2(3)                                                     <---------AtMYB61       <-----------GT1                                                <---------ANAC46             <<<<<<<<<<<<<<<<<LFY                                                <---------ANAC58       ------------>CBF    --------->TOE1(3)                           <---------ANAC58     *TSS  <---------ATHB12        --    --------->TOE2(3)                         --------->ARR11(3)    --------->GLK1(1)------------>CBF >GLK1(2)       <------ZmHOX2a(1)  <-----------HVH21<--------P <-----------GT1------------>CBF-------   aaggaaccctaaattggaggagaagaaggaagaagagagtcagagaaatgtcttgttggttggattcacgatttccaattaacaatggccaatttccaaa  6528200                                                                               --------->ANAC46                                                                               ----------->GT1                                                                               --------->ANAC55(2)                                                                              <---------TOE1(3)                                                                              <---------TOE2(3)                                                                             <---------DOF5.7(2)                                                <---------ANAC58          --------->TOE2(3)                                            <------------CBF        <---------ICU4               <---------ANAC46           <---------YAB1            --------->YAB1               <---------ANAC58    <---------ZAT14                  -------->HAHB4     <---------CCA1(2)        <---------ARR11(3)         <---------ZAT18                  --------->ATHB12 --------->AHL20(2)   ------------>CBF        --------->AHL20(2)   <---------ANAC58   <---------YAB1    <---------AHL20(2)  <-----------GT1     ------------>CBF <---------ZAT6             <---------TOE2(3)  --------->YAB1 --------->GT1 <---------ANAC58    --------->ZAT14        <----------DOF2 --------->TOE1(3) --->DOF2  <----------DOF2<---------ATHB12<---------AHL20(2)    <---------AHL20(2)  --------->ICU4   gaagtaacaatttcttttcttgtaaacaatgaattagtgtagttttaattgcgagaccctctttgtttaatgatagccttaacgtaattatatctgtgtt  6528300                  --------->MYB46(3)                  <---------ATHB12             --------->ANAC46             --------->AtLEC2             --------->ANAC58             --------->ANAC58         ------>MYB46(1)         -------->P--------->YAB1         ------>MYB83        --------->MYB55(1)               <---------ZAT14       <---------MYB111(1)               --------->ARR14(2)                                <---------MYB52(1)       --------->MYB46(3)                --------->ZAT14                          ------>MYB83       <---------MYB46(2)      ----------------->AGL1   <---------ZAT14           ------>MYB46(1)       --------->AtMYB61       ----------------->AG  <---------ANAC46           <---------MYB59   ---       <---------MYB111(2)--------->ATHB12  <-----------GT1                    --------->ANAC55(2)<--       <---------MYB55(2)--------->MYB46(3) --------->ANAC46                 <-----------GT1   ------      --------->MYB46(3)------->TEIL     <---------ARR14(2)               <----------DOF2  <---------   tttttgctaccaaccaggcaaccatgaaccattgccaatacagtatacaccatttgagtatagttttagcatcaaacttttacctaatactccctttgtc  6528400                                                                          --------->ICU4                                                                          <---------YAB1                                                                        --------->YAB1                                                                   <---------YAB1                                                                 -------->HAHB4                                                                 <---------ICU4                                                                 -------->ATHB1                                                                 <--------HAHB4                                                                 --------->ATHB12                                                                 --------->ATHB51                                                                 --------->YAB1                                                                 <---------AHL20(2)                                 <---------AHL20(2)             <---------YAB1                                 --------->AHL20(2)           <---------ICU4                                 --------->AHL20(1)           <--------HAHB4                       <---------AHL20(2)                     <--------ATHB1                       --------->ATHB51                       --------->ATHB51                       <---------ICU4                         --------->YAB1                       --------->AHL20(2)                    --------->ICU4--------->ATHB51 --->ZmHOX2a(1)       <---------AHL20(2)                     <---------ATHB51 --------DOF2         <---------AHL20(1)      <---------TOE1(3) --------->ICU4 --------->YAB1 ---->ID1             --------->AHL20(2)      <---------TOE2(3) <---------ATHB51 -DOF2     <---------TOE2(3)    --------->AHL20(2)           <---------ATHB12<---------WOX13(1)   cttttttttttttaagaaaaacaaattatttcaaaaaaattgagtttttaggttttcaatgcaataattattagttataattgataacttgtaaacttca  6528500               --------->ATHB12               --------->ATHB51              <---------AHL20(2)              <---------YAB1            <---------ICU4         <---------AHL20(2)        <---------AHL20(2)        --------->AHL20(2)       <---------YAB1                                                            --------->ANAC55(2)     -------->ATHB1                                                              <---------ANAC55(2)     <---------ICU4                                                            <-----------GT1    --------->ICU4                                              --------->AHL20(2)     --------->TOE2(3)    <---------ATHB51                   ----------->GT1--------->AHL20(1)    <---------AHL20(2)    <---------AHL20(2)      --------->ARR11(3)        --------->AHL20(2)   --------->AHL20(2)    --------->AHL20(2)      <---------ARR11(3)       --------->YAB1   ----------->RAV1(1)   <xxxxxxxx   atacaaattattaaatattattggtttagagttcttaaaaattgtaaatcacaaaaaataatacatttaaaacaacatttaatacgttttcttaatattt  6528600                      ---------->DOF2                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 --------->AHL20(2)              <------ZmHOX2a(2)                                                         <---------AHL20(1)             --------->ARR11(3)                                                     <---------AHL20(2)             <---------ARR11(3)                                                    <---------YAB1             ------------------------>ANAC81                                      <---------AHL20(2)         ---------->DOF2                                                       --------->AHL20(1)       ------>ZmHOX2a(1)                                                       <---------AHL20(1)       ==============HOX2a_HOX2a          --------->AHL20(2)               <---------AHL20(2)      --------->TOE2(3)--------->DAG2    --------->AHL20(2)               --------->AHL20(2)      --------------->AGL15              --------->YAB1                --------->AHL20(2)     ----------------->AG             --------->YAB1                   <---------AHL20(2)        <--- xxxxxxxxxxxxxxxsmallRNA(le3)      --------->YAB1                     --------->AHL20(2)<---------AHL20(2)   gtatttttcctaaaagatcaaacaaaaaggaacagaagcataataaaaatacaattttctattactaaactatttatttaatatttttattttatttgat  6528700  Previous    Next  AGI:  At4g10570.1    Description:  ubiquitin carboxyl-terminal hydrolase family protein. Identical to Ubiquitin carboxyl-terminal hydrolase 10 (UBP10) [Arabidopsis Thaliana] (GB:Q9ZSB5;GB:Q9T0B6); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G32850.1); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10590.2); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10590.1); similar to Putative ubiquitin carboxyl terminal hydrolase [Oryza sativa (japonica cultivar-group)] (GB:AAN04210.1); similar to hypothetical protein OsJ_032537 [Oryza Range:  from: 6523251    to: 6528169    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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