Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ARR11(3)                                                                                <---------ARR14(2)                                                                                --------->ARR11(3)                                                                                --------->ARR14(2)                                                                     <---------bZIP60(2)                                                                     <---------O2--------->CCA1(2)                                                                     <---------TGA1a                                                                     --------->TGA1a                              --------->ANAC58                    ----------->HVH21          --------------->AGL15       <-----------GT1           --------->ZAT2----------->ARR10  <-----------GT1        --------->ZAT18                        <---------At4g35610 --------DOF2           <------ZmHOX2a(1)         <----------DOF2 ----------->TGA1 -------DAG2  --------->YAB1  --------->ANAC58    =============================bZIP_DOF -----GT1 <---------------AGL15----------->GT1 ------>NtERF2    --------->At4g35610   <---------WOX13(1)   ctttttccaattctactaatagttgaggacacaaggaaataaacttctccgactttgaattgatagagctgacgagggagaagatttgatagatgaggga  6522500                                                                 ------>MYB83                                                                 ------>MYB46(1)           --------->LBD16                                                               --------->AtMYB61       <---------ARR14(2)                                                            <---------ALFIN1           --------->GLK1(2)                                                         --------->ANAC46        --------->GLK1(2)                          <---------TOE2(3)              --------->ANAC58        --------->ARR14(2)                         --------->YAB1                  --------->ANAC58        <---------ARR14(2)                    <---------MYB59                    <---------ALFIN1    <---------ARR14(2)                 <---------WRKY18(1)                --------->PCF5         --------->ARR14(2)      --                --------->WRKY12                    --------->PCF2  ------>ZmHOX2a(1)  --------->ARR14(2)                ----------->HVH21                   <---------TCP15(1)     --------->GLK1(2)      ---   cacgagttctggctctggctgaccgaataatgtttcacatagaggtctatcgaggtcccactccaccttcctattcgaatccgaatccgaatccgtagaa  6522600                                        <---------At4g35610                                        --------->At4g35610                                 <---------ZAT18                                 --------->ZAT14                           ------>NtERF2<---------ZAT2                          <---------ETT(1)                          ----------->HVH21                      --------->At4g35610                      <---------At4g35610  <---------LBD16                      <---------GLK1(1) --------->ZAT2                         <---------ANAC58              <---------ZAT6    --------->ALFIN1                               <---------ANAC58       ---------->DOF2--------->ZAT2  ---------->CDC5            ---------->DOF2                    - ------->ATHB12  --------->CCA1(2) <---------PCF2 --------->AHL20(2)           <---------ANAC46     < ------>ICU4----------->GT1----------->RAV1(1)    <---------AHL20(2)--------->DAG2          ---------   atgatttgagaaaggagtgatatgagctccgacagtgggctcagctcgggatttaaatccatggagtcaaagagtgagattgcttgagtaactagtgaca  6522700                                          --------->WRKY12                                          ----------->HVH21                                          --------->WRKY38(1)                     --------->At5g28300<---------ZAT2                   <---------DEAR3(1)   --------->At4g35610     ------>NtERF2--------->At4g35610   --------->ZAT2                     <---------AHL20(2) ------>TEIL <---------ANAC58  --------->ARR14(2)                  --------->ATHB12 ---------GLK1(1) <---------At4g35610   <---------At4g35610       <---------ATHB12               ---- -->HVH21    <---------ANAC58  <---------ARR14(2)                 --------->ICU4           --------->MYB52(1)   tgaactccgactctggcttcggctgtgaatgcaaatccattgagctgaccagagagattatttgagcaatgagtgatataatctccgaatgagtaactga  6522800                --------->GLK1(2)                --------->ARR11(3)                --------->ARR14(2)                <-----------ARR10                <---------ARR11(3)                <---------ARR14(2)                      --------->At4g35610             --------->LBD16                       --------->CCA1(2)                ------>NtERF2         --------->ARR14(2)                  --------->ATHB12                     <---------ANAC46         <---------ARR14(2)                 --------->ICU4                   <---------ZAT6 <-------- ----->GLK1(1) <---------GLK1(2)          --------->CCA1(2)    --------->ZAT6<-----------RAV1(1)   attccatttcgaatccagaatcttgggaagacttattagttgagaaatgagtgatatgagctctaactctgaatccatagtgttgccgagagaaaattgt  6522900                  <---------ARR11(3)                  <---------AHL20(1)                  --------->AHL20(1)                  --------->ARR11(3)                             <---------MYB46(3)                <---------ARR11(3)                             <---------ANAC58                --------->ARR11(3)                             <---------ANAC58                --------->AHL20(1)                         <-------MYC3              <----------DOF2       --------->CCA1(2)     ---------->DOF2               ------->MYC3              <---------DAG2   <---------WOX13(1)<---------AHL20(2)                 <---------ALFIN1          --------->ANAC58 ----CBF        <---------AHL20(1)<----------DOF2    --------->ANAC46             --------->ANAC58 --   ttctgagtgatatgagaaaatatttttttgccaaagctttgaaacttactgtctccctccacatgggttgtgactcttgttctcacgcttttctatacta  6523000                 <---------ANAC58             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           --------->ARR14(3)           <---------ARR11(3)           <---------ARR14(3)           --------->ARR14(2)           <---------ARR11(1)           --------->ARR11(3)           --------->GLK1(2)           <---------ARR14(2)           <-----------ARR10           <---------AGP1          <---------CCA1(2)          <---------ARR14(1)         --------->LBD16                                          ------>ZmHOX2a(2)        <---------ANAC58     ----------->TBP                    --------->ARR14(2)        <---------ANAC46   --------->AHL20(2)        <-------TEIL<------ZmHOX2a(2)        <---------ANAC58 --------->TOE2(3)        --------->At4g35610     <---------WOX13(1)       <---------LBD16  <---------ICU4          <-----------RAV1(2)      <------------CBF    <---------ANAC58    --------->YAB1         <-------TEIL     <---------ARR14(2)    <---------ANAC58  <-----------GT1         --------->CCA1(2) --------->ARR11(3) <---------CCA1(2)<----------DOF2        --------->CCA1(2)  <------ZmHOX2a(2)    <---------YAB1 ------->ANAC46  <---------ANAC58 <-----------GT1 <---------At4g35610--------->REM1(2)   ------------   cccataacttgcggatcttgctttaaacattatatataacaagataagattcagatgcacagatcagatcgtgtagattgactatgaaacatacaataaa  6523100                                    --------------->AtSPL3                         --------->ANAC55(2)                         <---------ANAC55(2)                         --------->ANAC46          --------->At4g35610       --------------->AtSPL8          <---------At4g35610 <---------ANAC58                    <------MYB46(1)          --------->ZAT2 <---------ANAC58                         <------MYB83          <---------ZAT2 <---------ANAC58                       <--------P      <----------DOF2       <---------At4g35610    <---------ANAC58                 ----------------------->TaNAC69(2)       --------->At4g35610    <---------ANAC46           <---------ETT(2)   <---------RAP2.6(2)  --------->YAB1        <---------TOE2(3)            ------>ZmHOX2a(2)<----------DOF2              <- >CBF--------->YAB1    <-----------GT1              <---------At4g35610   <-----------GT1 <---------AHL20(2)   tgtataatcagcagctctgagtaatttacgtagcgttgttcgtactcgtttttgatctgtctactagttggtcttttttcggctttcggttttatattgt  6523200                   ----------------->AGL1              --------->MYB111(1)           --------->YAB1     <---------ANAC58                   <---------YAB1      --------->YAB1                         <-     <---------ANAC58 <-----------RAV1(2)           <---------TOE2(3)                            ---- --------ZAT6<--------P           --------->ZAT14   <---------YAB1            ------>ZmHOX2a(1)  ----   tgtgttagcgtaatggtaagtgcctcagtggaaaacttcactataaatgtgactatggttaatgagcattagtcattttcctcatagccatagctacaca  6523300                                                                                              <------                                                                                             <-------                                                                                         --------->ZAT6           <---------At4g35610                <---------ARR11(3)                       <---------ARR11(3)           --------->At4g35610                --------->ARR11(3)                       --------->ARR11(3)       <-----------GT1                   --------->MYB46(3)                           <---------CCA1(2)    <---------AHL20(2)             ---------->DOF2                            --------->CCA1(2) --------ARR11(3) --------->YAB1 <---------HSFB2a(2)                        <------ZmHOX2a(1)<------- ----->ANAC58     --------->AHL20(2)  <----------ID1              --------->YAB1 <-----------GT1 ----->ANAC58    <---------ATHB12--------->HSFB2a(2)       ----------->GT1<---------TOE2(3)  --------   agttatttttttcagctcaataatatcaataggttccaaaagaacaaacatcttcttggtgttgaaaatcacaatgaaggatataactatatctctacac  6523400  Previous    Next  AGI:  At4g10560.1    Description:  MEE53 (maternal effect embryo arrest 53); protein binding / zinc ion binding. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G62030.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02540.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48320.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain DC1 (InterPro:IPR004146); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6520767    to: 6522878    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g10570.1    Description:  ubiquitin carboxyl-terminal hydrolase family protein. Identical to Ubiquitin carboxyl-terminal hydrolase 10 (UBP10) [Arabidopsis Thaliana] (GB:Q9ZSB5;GB:Q9T0B6); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G32850.1); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10590.2); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10590.1); similar to Putative ubiquitin carboxyl terminal hydrolase [Oryza sativa (japonica cultivar-group)] (GB:AAN04210.1); similar to hypothetical protein OsJ_032537 [Oryza Range:  from: 6523251    to: 6528169    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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