Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------>MYB46(1)                                           ------>MYB83<---------ICU4                                       <---------At5g28300                                      <-----------GT1 --------->ICU4                                   <---------ICU4   <---------AHL20(2)                                 <---------ARR11(3)<---------AHL20(2)               --------->AHL20(2)                             <---------ANAC46      --------->AHL20(2)     <---------ZAT6         <--------P          <---------ANAC58    --------->TOE2(3)        ----------->GT1 ------DOF2                  <---------ANAC58    --------->YAB1 <---------ARR11(3)  <---------AHL20(2)   tttaatctctggtagagaactattcagagtagcttgatatttaccatccaatattaattagtagaagaactattcagagttaatatttaaaattcgagat  6499400                             <---------ZAT18                            <---------ZAT6                                                    -------                   --------->AHL20(1)                                                         -------                   --------->ARR11(3)                                                     <---------AHL20(2)                   <---------ARR11(3)                                                    <---------AHL20(2)                   <---------AHL20(1)   ------>MYB46(1)                                  --------->AHL20(2)              --------->ANAC58          ------>MYB83                          --------->TOE2(3)              --------->ANAC58        <---------MYB59             -------->ATHB1    --------->AHL20(1) ----------->GT1--------->AHL20(2)    --------->TOE2(3)          --------->ICU4     <---------AHL20(1)   taagagtaatttagccaagaaaatattctagtgttcttaacctaattagttttattctcagtagagaattattcaaagtttcttaatatttttaaattca  6499500                                                                                         <-----------                                                                                       <---------YAB1                                                                                    <---------------AGL15                                                                                    --------------->AGL15                                                                                  --------->At4g35610                                                                               <---------At4g35610                                                                               --------->At4g35610                                                                               <---------ZAT2     ---                       <-------TEIL                                            --------->ZAT2    >>>> -->AHL20(2)          --------->CCA1(2)                                     <---------At5g28300 ----- ----->CBF<----------DOF2        <---------ZAT6                            <-----------GT1 ----------   atatttgaattacttttaacttagatacaactctagtgttgttatgttgatcacttctaatctcattagagaactattcacagctgcttaatattgaaaa  6499600                                                                            <---------DDF1                                                                           ----------->HVH21                                                                           --------->DREB2C(2)                                                                           ------->GAMYB                                                                           --------->At1g77200                                                                           --------->DEAR4(1)                                                                          --------->DEAR3(2)            --------->AHL20(2)                                            <------------AtMYB77  <---------ATHB12    <-----------GT1                                     --------->MYB46(3)      --- -CBF     --------->AHL20(2)                                             -------->P               --- --------->CBF     <---------GLK1(2)                    ------->TEIL --------->ANAC58 <---------HSFB2a(2) >>>>>>>>>>>>>LFY  --------->ARR11(3)              <------------CBF  --------->ANAC58 --------->HSFB2a(2) ---->GLK1(2)      <---------ARR11(3)<-----------HVH21 <---------GLK1(2)--------->MYB52(1)        <-- ->GT1   --------->YAB1------------>CBF  <---------TOE2(3)         ---------->DOF2  <---------REM1(1)   tccaatgtttaaaataatatagattttcaatttgaactatgtcaaggatgaaacattgaatctcaaaaacaaagcaaccgacatggttgtagaaagagtc  6499700                                         --------->TOE2(3)                                         --------->TOE1(3)                                         --------->YAB1                                        <<<<<<<<<ARR1                                        <<<<<<<<<ARR2                                    ------------>CBF    --------->TOE2(3)              --------->YAB1    --------->TOE1(3)           <------------CBF  <---------TOE1(2)          <----------DOF2 ------>HSFB2a(2)       <----------DOF2--------->GLK1(2)                <----------DOF2 --->ZmHOX2a(1)----------->TBP --------->ATHB12                  <----------DOF2 -------HSFB2a(2) ---------->DOF2<---------WOX13(1)         <-----------GT1   ctcgaacgttagaccttatataaagcctttgcttcattgacaatcttaaacatcgaaacatttatctctttcttctttcaaacgagaaaatgagcaaaac  6499800                                                          <---------ZAT2                                                          --------->ZAT2                                                          <---------At4g35610             <---------MYB52(1)                           --------->At4g35610           <---------ANAC58                        <---------ANAC58           <---------ANAC46                        <---------ANAC58           <---------ANAC58                 <------ZmHOX2a(2)          ---------->ID1                   <---------ARR14(2)      <---------ANAC58                     --------->ARR14(2)      <---------ANAC58                    <---------At4g35610  <----------DOF2<-----------GT1<---------YAB1     <---------ANAC46       <---------WOX13(1)   catacttttcttggcgttatttctatctatagttttgaatgtgcagatcagtttcgtcgtagctgagagcaaggtaattggtatttatgcgagatgtctc  6499900                  --------->WRKY38(1)             --------->ANAC58               <---------AHL20(2)             --------->ANAC58              --------->AHL20(2)       ----------->RAV1(1)                 <---------AHL20(2)    --------->ANAC46              <----------DOF2                                                 <--    --------->ANAC58             <---------ANAC58                     <----------ARF1      ------>ZmHOX2a(1)    --------->AtLEC2             <---------ANAC58               <---------ANAC58         ----------->RAV1(2)    --------->ANAC58 <---------YAB1    <---------YAB1           <---------ANAC58       <---------ARR14(2)   ttgctcatgcaacataagcattgactattgtttttgcttttgtgattaaataggtttatgtagtttacttgggagagaaggaacatgacaatcctgagtc  6500000                                                                                --------->CCA1(2)                                                                               <---------ARR11(3)                                                                               --------->ARR14(2)                                                  <---------------AtSPL3       --------->ARR11(3)                           <-----------HVH21      --------------->AtSPL8       <---------ARR14(2)              <-----------HVH21                   <---------------AtSPL8 <---------HSFB2a(2)      <-----------ARR10  <---------AtMYB61    --------->ATHB12           --------->HSFB2a(2)      ------->TEIL  <-----------RAV1(1)      <---------YAB1           <----------DOF2     <---------GLK1(2) <---------ANAC46  <------MYB46(1)           <---------ARR11(3)  <-------TEIL - ---------HVH21    --------->ARR11(3)    <------MYB83             <------ZmHOX2a(1)<-------TEIL     -   tgtcactgaatctcaccatcagatgttgtggtcacttcttggaaggtatgatttagtacttcaacacaggaacttttggaagatatacatacatatgtcg  6500100                            --------->ATHB12                         <---------ANAC58                --------->ANAC55(2)                <---------ANAC58                <---------ANAC58                                                           <---------                <---------ANAC55(2)           ---------->DOF2                          --------->ANAC58 --------->ARR11(3)      <---------ANAC58   --------->At4g35610                      <---------ALFIN1 <---------ARR11(3)   <----------DOF2<---------YAB1                                 <---------REM1(2) -------->RVE1(1)   --------->MYB52(2)      <---------At4g35610        <---------ANAC46--------->ANAC58 -------->CCA1(1) <---------MYB52(1) --------->ICU4        ------>ZmHOX2a(1)      --------->ETT(2)  <   aaatatctcagatagattacgttactttcttgatttgtcatgtttcagcaaagaggctgtccttgattcaatagtgtatagttatcgacacggcttttca  6500200             --------->ZAT18           <---------At4g35610           --------->ZAT2           <---------ZAT2                               --------->WRKY12           --------->At4g35610                       <---------ANAC46          --------->ANAC58               <---------HSFB2a(2)                   <---------MYB59          --------->ANAC58               --------->HSFB2a(2)           --------->ATHB12 -DOF2------>NtERF2       --------->ANAC58     <----------DOF2      <---------ANAC58 ----------DOF2           --------->ANAC58 <---------MYB52(1)       <---------ANAC58   ggctttgcagccaagctcactgagtcccaagcacagcaaatttctggtacttttagcgttgaactctgtttcttgatttgacctaaaccaagaagttgtt  6500300  Previous    Next  AGI:  At4g10520.1    Description:  subtilase family protein. similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10530.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10550.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62885.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80173.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62884.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains Inter Range:  from: 6499790    to: 6502862    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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