Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                           ----------                               --------->AHL20(2)                                       <------ZmHOX2a(1)                              --------->AHL20(2)      --------->GLK1(2)               <---------TOE2(3)                     --------->GLK1(1)    <----------DOF2                             <---------TOE1(3)                  --------->ANAC58     --------->GLK1(2) <----------DOF2          --------->At4g35610                  --------->ANAC46 <-----------GT1   <---------GLK1(2)            <---------At4g35610                  --------->ANAC58 --------->YAB1--------->ANAC46                 --------->ZAT2              ------>ZmHOX2a(1)<---------AHL20(2)--------->ANAC58                 <---------ZAT2           ---------->ID1     <---------AHL20(2) --------->ANAC58            <---------LBD16  <------   ttgtcgaaattttgtcctaaacgaaatccaaatttaatcacaatcttttacacgagattcttttgtagtttctaattccttcggagctaaggaatgacga  6495600                                <---------ANAC46                   --------->WRKY12             <----                           --------->YAB1                        <---------At4g35610      <---------ARR11(3)                           <---------At4g35610             <---------GLK1(2)              <---------AHL20(1) ->HVH21        <---------TOE2(3)                          <---------ARR11(3)             --------->ARR11(3) ->TGA1         <---------TOE2(2)                   --------->AHL20(2)           <---------ARR11(3) ---YAB1        <---------TOE1(2)        XXXXXXXXXXXXXXXXXXXX>MIR161.2          <------ZmHOX2a(1)   atgagcatgaaacatacttaggtttgctctgatgatgtgttcaatacattgcaataaactagattttagttgacttagaacaggatgtttgatatattct  6495700                                                                                             --------                                                                                             --------                    ----------->GT1                                                          --------          <------------CBF                                                                  ---------         --------->ATHB12       ----------->HVH21                                   ------------>CBF   <------------CBF<---------TOE2(3)                                   --------->ANAC58     ========= ------DOF2       ---------->DOF2                     --------->YAB1   --------->ANAC58     <--------   ttacacattgtttattggattaaagtaaaactctgtgactctgactatatgacgaaagataacaaattcaaacaagaaaaacttagaacaattccaagaa  6495800                                                                  <---------YAB1                                                                --------->ATHB12                                                                <---------ICU4                                                                --------->ATHB51                                                                <--------HAHB4                                                            ----------------->AGL3                                                            =========================================                                                        --------->ARR14(2) ->ANAC46                                               <---------ARR14(2) ->ANAC58                        ----------->RAV1(1) <---------TOE2(3) ->ANAC58                     --------->ANAC46       <---------TOE1(3) ------>AGL15              ---------->DOF2 <---------AHL20(2)  --------->ICU4        XXXXXXXXXXXXXXXX =============================================================================MADS_MADS           --- -------AGL15           --------->At4g35610--------->AHL20(2)  <---------YAB1  <-------TEIL   -------   atagaaacattttggtcaaaaaactcatctaaaggccacatcgatataaatgtttaaggttccccattattagtccccaaatacattctcttgtaatgag  6495900                                                                               --------->ZAT2                                                                               <---------ZAT2                                                                             ------->PIF5                                            <---------YAB1                   <---------------------WRI1                                      --------->ICU4                         <-------PIF5                                      <---------YAB1                        <---------DEAR4(2)                                 ----------->GT1                           <---------DEAR3(1)            --------->WOX13(1)   <------MYB46(1)                         <---------ZAT2          ------------>CBF  <---------TOE2(3)                        --------->LBD16          ------- --------->YAB1     <---------------AtSPL8  ------------>CBF   <---------ANAC58--------->At4g35610 =========================================MADS_MADS            <---------ANAC58<---------At4g35610 XXXXX>MIR173 <---------ATHB12   <------MYB83                 --------->MYB52(2)         --------->ANAC58 ------>GLK1(1) <----------DOF2 --------->MYB59             <---------ARR14(2)--------->ALFIN1------- -->YAB1 --------->TOE2(3)--------------->AGL15       <------NtERF2  ------>NtERF2       --------->ANAC58   aaatcatagaacatcaatctttgtggtactaagtttggttataattctcaatgggcagagcggtttcttgccgcgagccggtgctgagagcaaggtactc  6496000                                --------->YAB1                           --------->LBD16                          <---------HSFC1(1)                          --------->HSFB2a(2)   --------->YAB1         --------->HSFC1(1)                                --------->ICU4   <---------AHL20(2)     <---------HSFB2a(2)                             --------->YAB1   --------->AHL20(2)  <-----------GT1                             --------->ARR11(3)              <- -->ANAC58        <----------DOF2                     --------->MYB52(1) <---------YAB1            -- -->ANAC58  <-------TEIL <---------LBD16              <-----------GT1  ----------->GT1  <-------TEIL   aacaattatatatgttcattctttttttccagaaacataaacagagaccaagagattaacagttttgaatatgttgtgataatcaataggttcatatagt  6496100                                         --------->ARR14(2)                                      --------->ANAC55(2)                                      --------->ANAC58                                      --------->ANAC55(1)                                      <---------ANAC55(2)              ----------->RAV1(1)     --------->ANAC46           --------->ANAC58           --------->ANAC58           --------->ANAC58 --------->LBD16      --------->ATHB12    <---------ANAC58       --------->LBD16       <---------ICU4    <---------ANAC46     ------>ZmHOX2a(2)      <---------YAB1               <------MYB83    <---------ANAC58   --------->ARR11(3)<---------GLK1(2)     <-----------HVH21        --------->ZAT14 --------ARR14(2)    <---------YAB1  <---------LBD16         <---------AtMYB61          <---------ZAT14 ------->ARR14(2) --------->ICU4  <-----------HVH21        <---------ANAC46  <------MYB46(1)    <----   gtatttgggtgagaagcaacatgatgatcccgagtttgtcacggaatctcatcatcggatgttgtggtcacttcttggaaggtatgtaagtgtagttttc  6496200                                       <---------YAB1                                     --------->REM1(1)                             <----------DOF2                            <---------ANAC58                            <---------ANAC58       --------->ZAT6     --------->ZAT14    <---------ANAC58    --------->YAB1                       <-------TEIL      <- -------GT1             <---------ANAC58<---------ICU4 ---------->DOF2       <---------ATHB12      <-   tccattctatactcatggttaatggttcttgcttttgcttcatcattcatgttacagtaaagaagaggcccatggttcaatggtgcatagttttcgacat  6496300                <------NtERF2              --------->DREB2C(2)              --------->RRTF1(3)              --------->ANAC46              <---------ATERF1(2)              --------->DEAR3(1)              --------->ATERF1(2)              --------->RAP2.6(2)              --------->RRTF1(2)              --------->RAP2.3(3)                      --------->ANAC58              --------->RAP2.3(2)                 <---------MYB46(3)             --------->ERF1                       --------------->AtSPL8             --------->RAP2.3(1)                 <---------ANAC58             --------->ORA47(2)                  <---------ANAC58             --------->ATERF1(1)                 <---------ANAC46            <---------RAP2.3(1)                 <---------LBD16        --------->ARR14(2)              --------->ANAC58        <---------ARR14(2)              --------->ANAC58     <---------TOE2(2)  <---------At5g28300    --------->MYB52(1)  --------->TOE2(3)     <---------TOE1(2)  -------->P --------->ANAC46    --------->ANAC58    <-----------RAV1(2)--------->MYB52(1) --------->AHL20(2)   ------>ZmHOX2a(1) --------ANAC58--------->LBD16     --------->ANAC58 --------->ARR14(2)                    <------ZmHOX2a(1) --------ANAC58------>NtERF2       --------->ANAC58 <---------ARR14(2)                  <---------TOE1(2)   ggcttctcaggtttcgccgccaaacttaccgagtcccaagccaagaaaatagcgggtactccatcctaatctcaaattttcttagcttcttaggaaccag  6496400                       <---------WOX13(1)                                           ----------->RAV1(2)                      <---------ANAC58                                         --------->ARR14(2)                      <---------ANAC58                                     <---------At4g35610                     --------->ATHB12                                     ======================RAV                    <---------YAB1                                <---------DAG2  <<<<<<<<<GT-1         ---------->DOF2               --------->GLK1(2)          <----------DOF2 <-----------GT1        <---------AHL20(2)       ------->GAMYB         <----------DOF2    ----------->RAV1(1)      <-   aaacatagatttaaaggccatcttgattgtctcaacagaacaatctgtttttgttttctttgctaatgctttttggcaacagatttacctgaagttgttc  6496500  Previous    Next  AGI:  At4g10510.1    Description:  subtilase family protein. similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10550.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10550.2); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62885.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48594.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62884.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains In Range:  from: 6495951    to: 6499006    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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