Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ------>MYB83                                                                                    ------>MYB46(1)                                                                                  <---------ALFIN1                                                                                  --------->DEAR3(1)                 ------>MYB83                                                     --------->AtMYB61                 -------->P                                                    --------->ANAC46                 ------>MYB46(1)                                               <-----------GT1                --------->MYB52(1)                                        --------->TOE2(3)         ---------->DOF2                                                 <--------HAHB4      --------->TOE2(3)                                                 <---------YAB1    --------->MYB52(1)  <----------DOF2                  --------->MYB52(1)    --------->ZAT6 --------ALFIN1 ------------------>SPL14               <---------MYB52(2)--------->YAB1             - --------->RAV1(1) ------->GAMYB                 ---------->DOF2--------------->AtSPL8             -- ---ETT(1)      <---------ALFIN1         --------->At4g35610    <---------------AtSPL8        <------   cccacatacctgaatgcccaaccgtactttagggaattacatccgatgcacaaaagaactaacaattttgtactatcattaacaccacccatttgcaact  6490600                                                                             <---------ANAC46                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          --------->MYB111(1)  <-----                                                                       --------->ARR14(2)      ------                                                                       ------->TEIL           <------                                                                    --------->ANAC55(2)       <------                                                                   <---------TOE1(3)          <------                                                                   <---------TOE2(3)         <-------           --------->ANAC55(2)           <-----------GT1          <---------DOF5.7(2)        --------        <------ZmHOX2a(2)                --------->YAB1         ------>ZmHOX2a(1)   --------->ATHB12 --------->DOF2                    --------->TOE2(3)           --------->TOE2(3)   --------->ICU4 ------->LBD16          <---------AHL20(2)            ---------->DOF2  <---------ARR14(2)<-----------GT1 ---GLK1(1)<---------ANAC55(2)     --------->YAB1--------->ZAT6--------->TOE1(3)   <---------YAB1   ccgaaagacgatcacatattgtagatttaaaatgcaatcttaatcacattttcactaaaagttttccttaacgtatttggtgggcatgatttaacagctc  6490700         <---------WRKY45         <---------WRKY12         <---------WRKY38(1)        --------->WRKY18(1)       <-----------HVH21      <---------At4g35610      <------MYB83      --------->ANAC58      --------->ANAC58      --------->At4g35610      <------MYB46(1) ----------AGL15                                                               <----------ID1 --------->AGL15                                                          --------->YAB1 -----------AGL3                                                --------->ANAC58 -----------AGL2               <---------TOE2(3)         --------->CCA1(2)--------->AHL20(2)      <-- -----------AG            <----------DOF2             <---------TOE2(3)--------->WOX13(1)    -------- --At4g35610         ------->GAMYB           <-----------GT1    --------->ANAC58            <-------- ->At4g35610       <---------At5g28300  --------->ICU4<---------YAB1 <---------ATHB12     --------->YAB1   aatttggcaggtcaacgaatcaaccgtgctttaaacgttgtaatgtttttcaacttaagataagactcgaaatcaattaaaaaaacaaacaaaaatcata  6490800                                                                              <---------ATHB51 -------YAB1                                                                  --------->ICU4   <----- ->YAB1                --------->ARR14(2)                        --------->TOE2(3)       <---------ZAT6 -YAB1    <----------DOF2     --------->YAB1                 <---------AHL20(2)--------->YAB1  ------   gtcattgtttttctttgttaattcatatacactcatacaaaacattgacaacttatctattgtttaatctaaataatacaattatgtacaagtgttactt  6490900                                             <---------YAB1                                        <---------bZIP60(2)                                        <---------ANAC58                                        --------->bZIP60(2)                                        --------->bZIP60(1)                                        <---------bZIP60(1)                                        <---------TGA2(1)                                        --------->TGA1a                                        --------->TGA2(1)                                        <---------TGA1a                                        <<<<<<<<<<HY5                     =============================MYC_MYB                     ------->GAMYB      <---------O2                    --------->ANAC46    --------->O2                   --------->RAP2.6(3)  <---------ANAC58                  --------->MYB52(1)    --------->ANAC46          ------>NtERF2                 <---------ANAC55(2)            ------->TEIL          <---------RAP2.6(3)           --------->ANAC55(2)         --------->ANAC46         <---------ANAC46              ----------->STF1   <-----------GT1         <---------ANAC58--------->ANAC58 --------->TGA2(2) <---------ALFIN1                   ------         --------->ATERF1(2)           <-----------STF1 <-----------HVH21                     <------         --------->DEAR3(1)           <---------TGA2(2)--------->bZIP60(1)                   <-------         <---------ANAC58--------->ANAC58<-----------TGA1----------->HVH21            --------->ANAC58 -----DOF2--------->ORA47(1)--------->MYB52(1) <------------CBF     --------->AtLEC2  --------->ANAC58 --->TOE2(3)      <-----------GT1    ----------->TGA1  <---------bZIP60(1)            --------->ANAC46   tagtaatactgccgtccatataacggcacaaaacggagaatgacgtcaccattgttgatgtcacacctccatgtaacttctgttataaacgcattaaacg  6491000                               <----------DOF2                           ---------->ID1                     <---------GLK1(1)                     <------ZmHOX2a(2)                     <<<<<<<<<GATA-3                     <<<<<<<<<GATA-4                     <<<<<<<<<GATA-2                     <<<<<<<<<GATA-1                                           <---------AHL20(2)                    <---------AGP1                                            --------->AHL20(2)                    --------->ARR11(3)                                 ------>MYB83      <---------ANAC46------>ZmHOX2a(2)                                ------>MYB46(1) --->ANAC46   <---------AHL20(2)                                     <---------MYB59              <-- ---TOE2(3)  --------->AHL20(2)<---------DAG2   <-----------GT1      <---------MYB46(2)           <-- ----GT1     *TSS   <---------ARR11(3)      <----------DOF2  <-----------GT1--------------->AGL15 ---   ttacacttgtgtatattatatagatctctgtccctttatatttcatcttttgacattacaaaattacattaccaaacacattaaatggcaacttctgcaa  6491100                                                                      --------->DEAR3(2)                                                                    ------>NtERF2                                                                   <---------ETT(1)                                                                   --------->DEAR3(1)                                                                   ----------->HVH21     --------->ARR11(3)          <-----------HVH21            ------>MYB46(1)        <---------TOE1(1)     <---------ARR11(3)      ------>ZmHOX2a(1)                ------>MYB83--------->SPL7        <---- ---------ARR10           ------>NtERF2                     --------->AtMYB61     <-----------HVH21 -------ARR11(3)          <---------ATERF1(1)           <---------ETT(1)<---------SPL7     --------->ETT(2) ------>ARR11(3)         --------->DEAR3(1)          <-----------HVH21--------->SPL7 <---------TOE2(1)   tatctaagctcttagtgtctgatttcgcctcctccgttcacatcccttcaaactatgtccgaccaatctccgaccgtccgaacttgtccgaggtcgagag  6491200                                                                                       --------------                                                                                       <-------------                                                                                      <--------------                               <---------PCF5                                         ---------------                             --------->LBD16           --------->At5g28300      <---------ANAC58                             --------->HSFB2a(2)       <---------RAP2.6(3)      <---------ANAC46                            --------->ANAC46          --------->RAP2.6(2)       <---------ANAC58                            <---------LBD16           --------->ANAC55(2) <---------ANAC58                           <---------LBD16            --------->RAP2.3(2) <---------ANAC58                         ------>ZmHOX2a(2)    ------>MYB83               --------->STY1(2)          <                     ------>ZmHOX2a(2)        ------>MYB46(1)      --------->MYB46(3) <--------------      --------->GLK1(2) <---------GLK1(1)   <---------MYB59        <---------MYB111(2)<-------------- -----GLK1(1)    ----------->HVH21        ------->TEIL<---------ANAC55(2)<---------STY1(2)   <-------   ttctggcgattccatccctctgatcgatctccgggacctccatggacctaatcgagccgtaattgtccaacaacttgctagtgcgtgttccacttatggt  6491300     --------->ANAC55(2)     <---------At4g35610     --------->ANAC46    <---------TOE1(3)    <---------TOE2(3)   <-----------RAV1(2)                                               <---------GLK1(1) ->AGL15                                                             <------ZmHOX2a(2) --AGL15                                                     --------->ANAC46 ---AGL1                                                    ------->GAMYB           <---------YAB1 -->AGL3                                                   <---------ALFIN1     <---------ANAC58 ----------DOF2                                       --------->AtLEC2------>ZmHOX2a(2)     <-------MYC3 ---AGL2                                            <---------ANAC58--------->ARR11(3)      ------->MYC3 ---AGL3                                            <---------ANAC58<---------ARR11(3) --------->CCA1(2) --TOE1(3)                              <-----------GT1  ----------->RAV1(1)    <---------ANAC58   ttctttcaggtaactccatgttagtatttctctgtttcaaattcactctgttttccttgcaacacactacgatctctgttttccttgtgatacacgtttg  6491400                                              <---------ANAC58                                              <---------ANAC58                                         --------->ATHB12                                       --------->GLK1(2)            <---------AHL20(2)                                      --------->YAB1                --------->AHL20(2)                                 <------ZmHOX2a(2)                  <---------AHL20(1)                                --------->ARR11(3)           ------->GAMYB                                <---------ARR11(3)          --------->MYB46(3)              <--------                             <---------HSFC1(1)             <------------AtMYB77    <---------ANAC58                             --------->HSFC1(1)         <-------TEIL--------->AHL20(1)      ---------             <---------ANAC58--------->HSFB2a(2)      <---------ARR14(2)            <---------ANAC46             <---------ANAC58>>>>>>>ZML2 --------->YAB1--------->CCA1(2)            <---------ANAC58           <-----------GT1   <---------HSFB2a(2)      --------->ARR14(2)         <---------MYB52(1)   ctctgtttcaaattttcttgtttattatgttctagatcaagaatcatggagtaccagatacaaccgtcaataaaatgcaaaccgttgcgagagagttctt  6491500  Previous    Next  AGI:  At4g10500.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G10490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62877.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 6491013    to: 6492472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version