Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ----------->RAV1(1)<---------YAB1                       --------->YAB1      ----------->RAV1(1)                                <------    <---------TOE1(2) <---------YAB1       <---------ALFIN1                                   <------    <---------TOE2(2) <---------AHL20(2)  --------->ANAC46                            <---------YAB1 -------TEIL         --------->AHL20(2) --------->ANAC46                   --------->YAB1     <------ ---->ICU4           <---------AHL20(1) --------->ANAC58              <---------AHL20(2)     <------- ->AHL20(2)          --------->AHL20(1) --------->ANAC58              --------->AHL20(2)<---------GLK1(2)   tattcatatgtttatgtatacaatataataaactccaacaataccccacattttcttattcaaactcaatatttaaatgataagaatactgattctcagg  6381300                                                                           --------->TOE1(2)                                                                          <---------ANAC58                                                    ---------->DOF2       <---------ANAC58                                                   ------>ZmHOX2a(1)    ------->TEIL                                               --------->ARR14(2)    --------->TGA2(1) ---TOE2(2)                                    <---------ARR11(3)    ----------->GT1 ---TOE1(3)                                    --------->GLK1(2)     <---------REM1(1)       -------- ---TOE1(2)                                    <---------ARR14(2)    --------->bZIP60(1)     -------- ----RAV1(2)    --------->AHL20(2)         --------->YAB1            <---------bZIP60(1)<------ZmHOX2a(2)   ttatgtcgaaattttggtttaaatctcatggttaacaaaaacaaatgaaaatcctaaagtaatagaaaatgatgtaacttgcgaaattagatcaacatta  6381400                                                                                         --------->AHL20(2)                                                              <---------AHL20(2)     ----------->GT1                                                             --------->AHL20(2)   <---------TOE2(3)                                                       --------->YAB1          <---------MYB52(1)                                                     <---------TOE1(2)        --------->TOE2(3)                                           --------->ICU4<---------YAB1  <---------AHL20(2)                                         --------->WOX13(1)  <---------AHL20(2)--------->DOF5.7(2) ->TOE1(3)                   <------ZmHOX2a(1)  <-----------HVH21--------->ANAC55(2)----------->GT1 ->TOE2(3)   <---------WRKY18(1)     <---------TOE2(3)<---------YAB1------->TEIL  <---------TOE1(3) <   acataccatgactcttgacctccattccataggaatactaaggcaattagtgtcccatgataattttatgtatttttaatcgttaagggataaaaatact  6381500                                                          ---------->DOF2                                                     --------->AHL20(2)                       <---------AHL20(2)           --------->AHL20(2)                   <---------AHL20(2)           <---------AHL20(2)            ---------->DOF2                  --------->AHL20(1)            --------->AHL20(2)           <------ZmHOX2a(1)                  <---------AHL20(1)        <---------AHL20(2)      ---------->DOF2     ----------->RAV1(1) ---------AHL20(2)<---------ARR11(3)        --------->AHL20(2)    --------->YAB1       --------->DREB2C(2)   atttaaaactctaatttctatatattttatgccattgaaatgaaatttatataaataaaaaaaagaaatcaaaagtataggaaagaagaccgacaattgc  6381600                                                                                                    <                                                                                                    -                                                                                                 <---                                                                                        --------->ARR14(2)                      <---------ZAT2                                              <------ZmHOX2a(1)--                  <---------At4g35610                                     <---------ARR14(2)     ----          --------->LBD16        --------->LBD16                          --------->ARR14(2)    <----        ------->GAMYB--------->ANAC58                <---------WRKY18(1) <---------PCF2 <---------ARR14(2)    ----------->HVH21--------->ANAC58         ----------->HVH21------->TEIL    <-----------RAV1(2) <-   caagaggtaaccccgagttcagcaagcttagcatccgaagtttgtctcatgaccttgactccatgaatttcagtgggaacctcaggagcgaatatcgaat  6381700                                                                                                  ---                                                                                                  <-- ---------ICU4                                                                                    --- -------->ATHB12                                                                                  <-- ------ICU4                                                                                       --- ------->ICU4                                                                                     <-- ----->YAB1                        *TSS ---------->DOF2   <-----------RAV1(1)                -------- -----ATHB12                     --------->YAB1      ------->TEIL     ---------->DOF2       --------- --------YAB1                   --------->ICU4  --------->CCA1(2) --------->YAB1       <---------AHL20(2)   catgattaagttccatagttgaaactcaaactaaatgatgaacaaagaagagatgaatatgtgttgtttcataaaagatgtgtccatatttaaaaccatc  6381800                                                    ------>ZmHOX2a(1)       --------->YAB1                       <---------SPL7 -------->GT1                          <---------TOE2(3)--------->YAB1 -------ANAC58                         <---------TOE1(3)<---------ICU4 ------>ANAC55(2)          --------->LBD16<---------------AtSPL3                                 <--- -------ANAC58             <---------RAP2.6(3)--------->SPL7                                    <---- ------>ANAC46             --------->At5g28300------->TEIL <-----------GT1                     <----- -------ANAC55(2)         <---------ANAC46<---------------AtSPL8                        ---------->DOF2 ->AtMYB61           <------------CBF  --------->DAG2  <---------YAB1             ------->GAMYB<----- >MYB46(3)     ----------->GT1   --------->AHL20(2) <---------YAB1             ----------->RAV1(1)<--   gcgtaacaacgatagtagggtaacattgccgtaaatgaaataaggttgtacgtcctgataataacacattgaactacatgacaacagagagaaagttgtg  6381900                                   <---------TOE2(2)                                   <---------TOE1(2)                              <-----------HVH21                              <---------RAP2.6(3)                              ------>NtERF2                              <---------SPL7                                     <---------RVE1(1)                             <---------ANAC58                                    <---------CCA1(1)     --------->YAB1          <---------bZIP60(1)                                <---------ARR14(2)    <---------YAB1           --------->DEAR3(1)               <---------AHL20(2)<---------ARR11(3) ----GAMYB--------->HSFB2a(2)<---------ANAC58            --------->ICU4         --------->ARR11(3) -----MYB46(3)             <---------ZAT18        <---------ANAC58            ----------->ARR10 ----AtMYB61               --------->ZAT18   <-----------RAV1(1)           --------->DEAR3(1) ----TOE2(3)     ----------->GT1--------->SPL7    <---------ANAC58        --------->ANAC58 ------P  <---------HSFB2a(2)--------->bZIP60(1)  <---------ANAC46        --------->ANAC58   --------   gttgctataattctagtactcgtaaatagtgccgtcccatgtttttagtgtggctagtactgatttttttagggacaccgaagatattaatacaatcgaa  6382000                                                ------>NtERF2              --------->ICU4                                --------->AHL20(1)                      --------->AHL20(2)                                --------->AHL20(2)          --------->ARR11(3)                                <---------AHL20(2)          <---------ARR11(3)                        <------ZmHOX2a(1)       <-----------HVH21       <---------AHL20(2)                       <----------ID1           ----------->RAV1(1)     <---------YAB1---------->ID1                     --------->DAG2            ----------->HVH21       <---------AHL20(1)                    ---------->DOF2            --------->ANAC46        --------->AHL20(2)            <---------YAB1     --------->AHL20(2) <---------ALFIN1     --------->AHL20(1)       --------->bZIP60(1)--------->ANAC58     <---------ETT(1)      ------->TEIL<-----------RAV1(1) ->YAB1<---------bZIP60(1)--------->ANAC58     --------->LBD16    <---------YAB1<---------TOE2(3)   <   atatttgtaatgtcactatagaaaaaggacgaaattaattgagactctcccgacacatgaaaaatctcatgaatataattttgatgttgtcgttatcagt  6382100                                                                                                 <---                                                                                                -----                                                  <---------YAB1                              -------      <---------ZAT6                            ----------->GT1                            <---------YAB1      ----------->GT1          ----------->GT1<---------GLK1(2)                     <------ZmHOX2a(1)  >>>>>>>>>ARR2    --------->DAG2       <-----------GT1                           --------->ANAC58 --------->ATHB12 ---------->DOF2  <---------AHL20(2)         ------>ZmHOX2a(1)   --------->ANAC58 ---------YAB1 <---------ANAC55(2)--------->AHL20(2) <-----------GT1   --------->AtLEC2 --------->ICU4   ttttgattgtgttaaatatgtaaagtagatagatgataaaattcacaagattgttatacgagtcctatatttcatgcaggtcgcaaggacatgatgaatt  6382200  Previous    Next  AGI:  At4g10290.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44489.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 6379697    to: 6381735    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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