Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ----------->GT1    <-----------GT1                                         ------------------------>ANAC81 ->YAB1   <---------YAB1                                   ---------->DOF2--------->DAG2 -YAB1 <----------DOF2      ----------->GT1            ---------->DOF2   ---------->DOF2   ctagttttacttttgattttttgaatactcatgttaaatggtattcatcttctgtatgaaagaaagaaaaaaaaaaaaagtaagtcatcgcaaaaccatt  6374300                                                             <---------AtMYB61                                                        <---------DAG2                            <-----------GT1             <----------DOF2                            <-                        <---------AHL20(2)           <-----------GT1                               --                        --------->AHL20(2)      <---------AHL20(2)         <---------YAB1   <--------                    <---------AHL20(2)       <---------AHL20(2)         <---------ATHB12 <---------AHL20(2)                    --------->AHL20(2)       --------->AHL20(1)    <------NtERF2         --------->AHL20(2)               <---------YAB1                <---------AHL20(1)   <---------DEAR3(2)     <---------YAB1       <---------WOX13(1)   <---------AHL20(2)<---------AHL20(2) <---------DEAR3(1)   --------->AHL20(1)     --------->ATHB12  <---------AHL20(2)    --------->AHL20(2)  --------->ETT(1)     <---------AHL20(1)    <---------YAB1 <---------AHL20(2)        --------->ARR11(3) --------->RAP2.6(3)   --------->AHL20(2) <----------DOF2<---------AHL20(2)           <---------ARR11(3) <---------ORA47(1)    <---------AHL20(2)   tttcttttgattgaatttttatttatttatttacattttgtgtttaatatattttttacttttttggtcggcaaatgatttttgatattatattattatt  6374400                                                                     --------->ANAC58                                                                     --------->ANAC55(1)               <---------YAB1                                        --------->ANAC55(2)         <-------TEIL                                                --------->ANAC58    ----------->RAV1(1)                                              --------->ANAC46 --------At4g35610 <---------REM1(2)                                 <---------ANAC55(2)    --------- ------->At4g35610<---------HSFB2a(2)    <-----------GT1        --------->ANAC46       <XXXXXXXXXXXXX -YAB1  --------->AtLEC2     ---------->DOF2                  --------->ANAC46       --------->ZAT18<   catctccaacatgcattattctacaaggagataaagaaaacatttactatatttcaaaacttggacacaacacgaaacccaaacaagtgaacaatctcaa  6374500                                             --------->ARR14(2)                                             <---------ARR14(2)          <---------YAB1                     --------->GLK1(1)         ------->MYC3                        --------->GLK1(2)     <-------TEIL                        <---------HSFB2a(2)     <---------ZAT18                     --------->HSFB2a(2)     --------->ZAT18                   --------->MYB52(1)   <-------PIF5--------->At4g35610   --------->MYB46(3)   ------->PIF5--------->RAP2.6(3)<------ZmHOX2a(1)                                         ---------  --------->At4g35610           --------->LBD16                                             <--------  --------->ZAT2         <---------MYB52(1) <---------GLK1(2)                              --------->ANAC46 >TOE2(3)<-------MYC3  ----------->GT1 -------->P           <---------DAG2                 --------->bZIP60(2) XXXXXXXMIR869.2  <------NtERF2<---------LBD16      <---------ICU4                        <---------- -----------RAV1(2)<---------ALFIN1--------->ARR14(2)  <-----------GT1         ---------->DOF2     <-   aaccaggtgcacatgatagcggcactcgttaatccaggaactaccagaatcccaatattaccccttatccaattcgttcttaaaaggctaacaacgtcat  6374600                                     ----------->RAV1(1)                                  ------->GAMYB                                 --------->MYB46(3)                        <-----------RAV1(1)                                ------>MYB83                              <---------YAB1                                ------>MYB46(1)                          <------------CBF                               --------->MYB52(1)                 --------->ANAC46                              --------->AtMYB61                   --------->ANAC58                             --------->MYB46(3)                   --------->ANAC55(1)                        --------->AtMYB61        <---------ZAT6   --------->ANAC58                        ------->GAMYB<---------ALFIN1<-----------GT1------------>CBF >TOE2(3)              --------->MYB46(3) <---------GLK1(2)     <---------ALFIN1 ---TGA1              --------->ANAC58   <---------At4g35610   <---------REM1(2) -STF1                --------->ANAC58   <---------ZAT2        <---------ZAT14   <---------ANAC58 ----------GT1      --------->MYB46(3) <---------ALFIN1        --------->ZAT14   <---------ANAC58   tttactatccagacagtagtaaacaaccaaaaccaacggccacagcttctagttttaactccaactacacggcaatattgttggcttcttctctcttaca  6374700               <---------ZAT14               --------->ZAT14             --------->ANAC46           <-----------GT1     ------------>CBF   --------->ANAC58           *TSS                                     ---------->DOF2   --------->ANAC58        --------->YAB1                      --------->ANAC46 <---------AHL20(2)   --------->ANAC46<----------DOF2                      --------->ANAC46    ----------->GT1  --------   taaacacaccaattcacttcactttctaaacatcatcaacaaaaacaattctcaatacacaaaacacaaaacacaaagaagtttaattctctgaagaaag  6374800                                                                               <---------DEAR3(2)                                                                               <---------MYB46(3)                                                                              <---------DREB2C(2)                                                                              --------->ETT(1)                                                                              <---------At1g77200                                                                              <---------DEAR4(1)            ---------->DOF2                                                   <---------DEAR3(1)         --------->ANAC58                   <---------ANAC46                <-----------HVH21       <         --------->ANAC58                  <------NtERF2              <---------ARR11(3)           <-         --------->AtLEC2                 ------>NtERF2          ------>MYB46(1)<-------GAMYB      <-     <---------HSFB2a(2)                 --------->ARR14(2)      -------->P<-----------RAV1(1)    <--     --------->HSFB2a(2)                 <---------ARR14(2)      ------>MYB83<---------ORA47(1)   <-- -->DOF2 --------->ANAC46       <---------ZAT18          ---------->DOF2 <----------DOF2       <-----   atgagttctacaagcaaagcatggacagtggcagtgagcatcggagccgtagaggcattaaaagaccaactaggtctttgtcggtggaactacatactcc  6374900        --------->YAB1          <------ZmHOX2a(2)                                <---------MYB52(1)     --------->WOX13(1)        <---------ARR14(2)                                --------->DOF5.7(2)   <---------MYB52(1)          --------->ARR14(2)                               <-----------HVH21  <-------GAMYB                --------->ARR11(3)                              <---------MYB46(3) <---------DEAR3(2)          ----------->ARR10                               ------>NtERF2 <------MYB83              <---------MYB52(1)                                <---------At4g35610 <---------MYB46(3)       --------->TOE2(3)                                 --------->DEAR3(1) <------MYB46(1)          --------->TOE1(3)                                --------->ERF1 ----------->GT1 --------->ANAC46                                         --------->LBD16 ---------DEAR3(1)--------->LBD16------>ZmHOX2a(2)                        --------->At4g35610 --------MYB55(1)--------->HSFB2a(2)                                      <---------At4g35610 -------P   --------->ARR11(3) <---------ARR11(3)                        --------->ANAC46 -------MYB52(1) <---------HSFB2a(2)                             --------->At4g35610 ---------HVH21 <---------LBD16--------->AGP1       <---------GLK1(2)   <---------LBD16  ------>ZmHOX2a(1) ----LBD16  <---------ARR11(3) <---------AGP1     --------->DAG2 <---------At4g35610-----------------   ggtcggttaatcaacatctccggaacaacgttagatctgtttctcaagggaaaaggttctcttcgtcttctgtctccgcagccgttacctcctctggtga  6375000                                                                    --------->AHL20(1)                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                   <---------AHL20(2)                                                               ------>ZmHOX2a(1)                                                               --------->ICU4                                                      <---------MYB52(1)                                                      --------->ALFIN1            --------->ARR11(3)                                                    <-----------RAV1(1)           <---------AHL20(1)                                                    <----------DOF2--------->AHL20(2)                                                    <---------MYB46(3)            <---------AHL20(2)                                  --------->ZAT14 <---------At4g35610             --------->AHL20(1)-                        --------->GLK1(2)         --------->At4g35610   ----------->GT1             - >AGL1                 <---------GLK1(2)    ------->TEIL      <---------MYB59 <---------AHL20(2)    <   gagcgagaaggctaagaaggctgaagaatctcttagaacagtcatgtacttgagctgttggggtcctaattaaattgtatataatatatagttttcttac  6375100                  --------->YAB1              ------>ZmHOX2a(1)            --------->YAB1          --------->ARR14(2)          <---------ARR14(2)                      ---------->DOF2          --------->GLK1(2)                <---------YAB1         <---------GLK1(2)              <---------YAB1      --------->YAB1                    <---------AHL20(2)                     --------->TOE2(3)   --------->YAB1<---------ATHB12       --------->ICU4                 ------->GAMYB -------------->AGL15                 <---------CCA1(1)               --------->MYB46(3) -------->HSFB2a(2) <---------YAB1   <---------ARR11(3)               <---------MYB52(2) ---------------AGL15<---------ICU4  --------->ARR11(3)   <-----------GT1     --------->YAB1  <------   ttctataatcagaatcctaatcaacattgcaattccatagatattattagttcaaagtagtaaccaagtacaacaaacaaacatcaatgtgactcaaatt  6375200  Previous    Next  AGI:  At4g10270.1    Description:  wound-responsive family protein. similar to wound-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G10265.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41250.1) Range:  from: 6374730    to: 6375206    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g10280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44489.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 6375121    to: 6376107    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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