Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->AHL20(2)                    <---------ZAT6           <---------YAB1                <---------ANAC58           --------->CCA1(2)                <---------ANAC58          <---------ARR11(3)   <---------ARR11(3)                 <--     --------->AHL20(1)                   --------->ARR11(1)   --------->ARR11(3)                 <-- ----->GT1     <---------ZAT2             --------->ARR11(3)   --------->AHL20(1)          <---------YAB1 -->DAG2      --------->ANAC58         <---------TOE2(3)       <---------AHL20(1)       --------->ICU4 -->DOF2      --------->ANAC58        ---------->DOF2     <---------YAB1     --------->AHL20(2)   <--   ttacaaatattatgccaagcttgtgttaagaagttagcattaaagatatgaataaatgtcatcaatatatcgatgtaaatttaagaagaaattatgtttg  6361800                   <---------ICU4                  --------->ICU4                --------->YAB1                <---------ICU4               <---------AHL20(2)               --------->AHL20(2)      <---------AtLEC2                                     ---------        --------->ZAT18     <----------DOF2                                                 <--------        <---------ZAT18   <---------YAB1  ----------->GT1                             ----------->GT1 -------ANAC58 --------->ICU4    <---------ANAC46                             --------->AtLEC2 -------ANAC46 <---------ATHB51  <---------ANAC58   --------->YAB1         <-------TEIL  <---------ICU4 -------ANAC58 <---------ATHB12  <---------ANAC58--------->YAB1     ---------->DOF2 --------->ICU4   acttgtatggtccacaaataattatgtcatctttgacttgtgcatggtcaaaaataacaataaatctcttaaaagcattcatggaaattagtaattactt  6361900                                                                                                  <--                                                                                                <----                                                                                              <------                                                                                              -------                                                        --------->MYB59                       <------                                                        <---------TOE1(3)                  --------->YAB1                                                        <---------TOE2(3)                  <---------ICU4                                                 <---------------AGL15                    --------->AHL20(2)                                                 --------------->AGL15            ------->TEIL-------                                          ----------->TBP                         --------->ARR14(2)                                        --------->CCA1(2)                         <---------ARR14(2)<                                       --------->ARR11(3)                  <------ZmHOX2a(1) -------- >AHL20(2)                             <---------ARR11(3)                <---------TOE2(3)<---------AHL20(2) -AHL20(2)    <---------YAB1  ----------->GT1 <-----------GT1            <---------TOE1(3)--------->ICU4   agtttaagaagaaattttgtttgacttctgtatggttcaaagatatatatactatatttaggtttgaaggaatttaaggaaacgtatatgtattaattat  6362000 -------AHL20(2) -----YAB1           <---------ARR14(2) ---AHL20(2)         --------->ARR14(2) -->AHL20(2)    <------MYB83                         <-----------GT1  ----------->GT1 ---ICU4 <---------MYB52(1)                       <---------ICU4     --------->DAG2 -->ATHB51      <------MYB46(1)             --------->YAB1  <---------ANAC58                     ---- -----------GT1 <---------ANAC46         --------->WOX13(1) <---------ANAC58                     <--- ->ICU4 --------->TOE1(3)              <---------ATHB12     <---------ANAC46                    <----   tttttctaacccttagctaggtgtatattctactctagtgaatcattcagaaatattacatttcttgtgagaaggtgattatcccaaatgacttcttcaa  6362100                           <-----------GT1                        --------->YAB1                       <---------ATHB12                       <---------ATHB51                                            --------->YAB1                   ------------>CBF                                              <---------TOE2(3) <-                  --------->TOE2(3)                                        <---------TOE2(2)       --       ------>ZmHOX2a(1)<---------ICU4                                     <---------TOE1(2)       xx ----->ARR11(3) --------->ARR11(3)                    --------->YAB1   <---------ZAT14           <--- ------ARR11(1) <---------ARR11(3)                    <---------ICU4   --------->ZAT14           <--- -----CCA1(2)  <---------CCA1(2)  ----------->TBP    --------->ICU4    --------->ZAT18           <---   atctttctcctattactatatctcaataataactgtatatatagaagaaaaactaattatcaaatttctctagttcacaggttaatgaaaatgaaattgg  6362200            <---------ATHB12            ----------->HVH21  <---------ZAT14  --------->ZAT14             <---------ANAC58  --------->ZAT18  <---------AtLEC2  <---------ZAT18 <-------TEIL<---------ANAC58 --------ANAC46<---------bZIP60(2)                  <---------HSFC1(2)                  --------->ANAC58 ------->ALFIN1<---------ANAC58                     <---------HSFB2a(1)                 --------->ANAC58 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <-----------RAV1(1)                    ---------->DOF2 ------ANAC46  <---------ANAC46 --------->ANAC58    --------->HSFB2a(1)     ----------->GT1 ------ANAC58  <---------ANAC58 --------->ANAC58 <---------PCF2  --------->ATHB12<---------YAB1    -- ------ANAC58  <---------ANAC55(1)     <---------AHL20(2)   <---------ATHB12<---------ZAT6 ----------   ggtgtgcacttccaatgacgtgcatgattttggcatgctatattatttgtgggagccttctaatgagtcattgccatggtgttataaaagaagcaaagac  6362300                ------>ZmHOX2a(2)                <xxxxxxxxxxxxxxxxsmallRNA(i)               <------ZmHOX2a(2)              <---------ARR14(2)              --------->ARR14(2)              --------->ARR14(3)              <---------AGP1              <---------ARR11(3)              --------->ARR11(3)              <---------ARR14(3)                                             <-----------GT1        -            ----------->ARR10                                          <---------TOE2(3)            <          --------->YAB1                         ------->GAMYB         <---------TOE1(3)            <   --------->DAG2                     <---------TOE1(3)     --------->AHL20(2)                      -  ---------->DOF2          --------->ZAT18      <---------MYB52(2)   ---------->DOF2               <- ------->AHL20(2)          <---------ZAT18      --------->MYB46(3)--------->YAB1   <xxxxxxxxxxxxxxxxx >DOF2   --------->ICU4 ---------->DOF2<---------At4g35610  <---------AHL20(2)   ------>ZmHOX2a(1) --   attaaaaagtaatgaagatcttgaaatagagcacaaacttaagcttatcaacaaacctgcatttaaaatcgtaaaggtttatcctctcaccatgttatag  6362400                                           ------>ZmHOX2a(1)                                          --------->TOE2(3)                                         --------->YAB1                                       ------>MYB83                              --------->AHL20(2)                              <---------AHL20(1)                              <---------AHL20(2)                              --------->AHL20(1)                     ---------->DOF2                             --------->AHL20(2)                 --------->YAB1 -------->ATHB12           --------->TOE1(3)                   <---------YAB1 ---------ICU4             --------->TOE2(3)               ----------->GT1 --------ATHB1     --------->AHL20(2)  ------>MYB46(1)  --------->ARR14(2)                    ------- -------->ATHB51 <---------AHL20(2) <---------ANAC55(2) <---------ARR14(2)                    ------- --------YAB1    --------->AHL20(2) --------->ANAC55(2)<------ZmHOX2a(1)                      ------- xxxxxxsmallRNA(s2)<---------AHL20(2)<---------MYB59--------->HSFB2a(2)                    <---------ATHB12 ------->ICU4--------->AHL20(2)   <-----------GT1   <---------HSFB2a(2)            <---------AHL20(2)   aataattgaatgtgtttatatatatataacattaaattacctatcctaagtattctaggatttgtataatagaaagacgatgaaatttatgaaatcatgc  6362500                                                                     --------->HSFB2a(2)        <---------AHL20(2)                                 --------->ALFIN1       <---------AHL20(2)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->AHL20(2)                              <---------ANAC58               ----------->HVH21       <---------ARR11(3)                              <---------ANAC58      -------->P<---------WRKY18(1)       --------->ARR11(3)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       <---------AHL20(1)                           xxxxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(i)       --------->AHL20(1)                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->WRKY38(1)    --------->AHL20(2)                        <---------DOF5.7(2)--------->GLK1(1)  xxxxxxxxxxxxxxxx>smallRNA(i)  --------->AHL20(1)                 <---------YAB1--------->CCA1(2) <---------HSFB2a(2)  --------->AHL20(2)               <---------------AGL15   <---------ANAC46--------->MYB46(3)<------- --------->YAB1                    ================================================================== -->AtLEC2                         --------------->AGL15   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xx -->ANAC58                  <-----------GT1  <---------WRKY38(1) <---------GLK1(1)<------ZmHOX2a(1) - -->ANAC58  <---------AHL20(2)    <-----------------AGL2 --------->ALFIN1--------->ANAC46  <xxxxxxxxx   aaaaaataatatattttcttatatatgaattcacagactattaatggtgaacgatatgggtgtgtggatttctacaaacaaccaggacttgaccactcat  6362600                                                       <---------ARR11(3)                  --------------->AGL15          <-----------GT1                 =========================================================================MADS_MADS                 <-----------------AGL1        <---------AHL20(2)                 <-----------GT1          --------->AHL20(2)       --------->MYB46(3)                 --------->AHL20(1)     --------->ARR14(2) --------->DAG2    <---------AHL20(1)     <---------ARR14(2) <---------TOE2(3) --------->ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------AHL20(2) --ATHB12 <---------ALFIN1--------->ARR11(3) <---------AHL20(2)                                   --- =================================MADS_MADS<---------AHL20(2)     --------->ARR11(3)              <-- xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->YAB1 <---------ANAC58       --------------->AGL15 <---- -------->AtLEC2 <-----------------AG     <---------ARR11(3)      <---------ARR11(3)      ----------- xxxxxxxxxxxxxsmallRNA(se3)         ----------->GT1<---------ANAC58       <---------------AGL15 -----   ccatgaagaaccacacatttcaccataaggtattgcattggtaatatattttttcttgatatttagaagatttcaactctatttagaatagatggtaatt  6362700  Previous    Next  AGI:  At4g10220.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80518.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 6362185    to: 6365075    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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