Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------PCF2   --------->AHL20(2)                       ----------->TCP11(1) ---->ZAT14          --------->ALFIN1    <---------AHL20(1) -----ZAT14        <-----------RAV1(1)   <---------AHL20(2)                                   <------ --CDC5 --------->AHL20(2)  --------->ICU4                       <----------ID1        --------->AHL20(2)   cacagcaaaataaaacatttgctgtgggccatttttgaaacaaaaaatttcatatgtataattcaaaaaaacaaaaattaagtggcccattttatacttt  6352800                                               <---------ICU4                                       ---------->ID1                                      <-----------GT1                                   <---------AHL20(2)                                  --------->AHL20(2)        --------->O2                   ----------                                 --------->ICU4<---------AHL20(2)              --------->At4g35610   --------->YAB1         ---------->DOF2     <---------ATHB12      --------->REM1(1)     --------->ANAC46  <-------TEIL      --------->DAG2<---------AHL20(1)        <---------O2<----------DOF2 --------->ANAC46 ----DOF2          ---------->DOF2<---------AHL20(2)        --------->ANAC46   <---------At4g35610   gagtttcataaaaaaaaaacataaagcccaaagtaatttttttccctaataaatccaactccacgaggcttcatctttctctgctccattacacaacaca  6352900                                               --------->REM1(1)                                               --------->bZIP60(1)                                               --------->bZIP60(2)                                               <---------bZIP60(1)                                              <------NtERF2                                             ----------->RAV1(1)                                             ------>NtERF2                                        ---                                         --------->ANAC46                                     <------                                         --------->ANAC58                                     <------                                         --------->ANAC58                                     <------                                       <---------ALFIN1                                       <------                                     ------->GAMYB               --------->ARR14(2)   --------->ARR11(3)        <---------ICU4              --------->ANAC46             <---------ARR11(3)   <---------ARR11(3)       <---------YAB1               --------->ANAC58             <---------ARR14(2)  --------->CCA1(1)     --------->YAB1                 --------->ANAC58            <---------CCA1(2)    --------->RVE1(1)  <----------DOF2                   --------->MYB46(3) ----------->HVH21  <----------DOF2    -------- ->RAV1(1)    <----------DOF2       ----------->HVH21<---------ICU4   <---------GLK1(2)    <---------MYB52(1)   aaccctttcatcatcgctttctaatcttcaagactccaacgacacggcgacatcaccatgacaagtatatctgattctttttaaaaaatatctgttactt  6353000                        --------->ZAT6                       <---------At5g28300 ------>HSFB2a(2) <---------TOE2(3)                                       <---------ANAC46 ---ANAC58        <---------TOE1(3)                                 <---------WOX13(1)          ----- ---ANAC55(1)    ---------->DOF2                                 <---------YAB1           --------->LBD16 ---ANAC58     <<<<<<<<<MYB98                                  <---------At4g35610      <-----------RAV1(2) ---ANAC46   <---------YAB1                            ------>ZmHOX2a(1) <---------LBD16<---------LBD16 ->MYB52(2) <---------TOE2(3)                   --------->ARR11(3) <------------CBF<---------ICU4   gtagaatttgagtttatgttaaagttacagtagaatttgacagaaaaatagttcttcctatatttatctgattgtttcggattaaaaatttcaggggttc  6353100                                  --------->ANAC58                                  --------->ANAC58                          ------>NtERF2                       --------->LBD16                     <---------LBD16                   <---------ARR14(2)                   --------->ARR14(2)                                                         <------                  <---------GLK1(1)                                            <---------At4g35610 --              ----------->GT1    --------->DAG2          <----------ID1    <----------DOF2    <------ ------->CBF<------------CBF    ---------->DOF2   ---------->DOF2----------->TGA1        <-----------RAV1(1)   caattcgaaaatcaaattgtaaatccggagcccaaaaagcaagagagagaagaaaagaagagacaaaatgacgaagtctttggctgattctatgttgagg  6353200                                     --------->TOE2(2)                                     --------->TOE1(2)         ====================================HOX2a_HOX2a         <------ZmHOX2a(2)        --------->ARR14(2)        --------->ARR11(3)        <---------ARR14(2)                           --------->ARR14(2)        <---------ARR11(3)        --------->GLK1(2)                            <---------ARR11(3)    ---------->DOF2        ------>MYB83      <---------ZAT14                   --------->ARR11(3) ---TOE2(3)                ------>MYB46(1)  <---------ZAT6                     <---------ARR14(2) --------->GT1         >>>>>>>>>>MYB80------>ZmHOX2a(1)  ---------->DOF2     ----------->ARR10<------ ---TOE1(3)  <---------ALFIN1 --------->YAB1--------->ALFIN1   --------->At4g35610    <---------ANAC46   tatgtgaaaagatcaacacctctcaaaccaaatgagaatcctacgagtgttgagaatgacaaagcagaagaaatttgtgaagatactgatgtgaatatga  6353300                                                           <---------At4g35610                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      <---------ARR14(2)                                                   <---------ANAC55(2)                                                   --------->ANAC55(2)  <---------AHL20(1)                       --------->ZAT14            <---------LBD16 ----------->GT1                      --------->ALFIN1           <-----------GT1 ----------->GT1                <----                  <---------At5g28300     <---------HSFB2a(2)--------->ZAT14 --------->ATHB12--------                 <<<<<<<<<<<<<<<<<LFY     --------->HSFB2a(2)<---------ZAT14<---------YAB1   <-------          --------->GLK1(2)            <----------DOF2--------->ARR14(2)--------->ARR11(3)   <------- ---YAB1 <---------GLK1(2)   ---------->DOF2     --------->MYB52(1)     --------->AHL20(1)  <--------   ataccataccagaatgtgtttacagtggagaaaaagatgagcttttggaaattacggatccagcaaactggaaaaatattgatagggaattaagagattt  6353400                                                        <---------ANAC46                                                --------->LBD16        --------->DAG2                         --------->ANAC46       ---------->DOF2                         --------->LBD16 -------GT1                <-------TEIL       <---------HSFB2a(2) ->ARR11(3)           --------->DAG2          --------->HSFB2a(2)                 <---------TOE1(2) --ARR11(3)         ---------->DOF2       <----------DOF2                         <---------TOE2(2)-- --GLK1(2)        --------->YAB1         <---------ANAC58            <---------ARR11(3)            -- -RVE1(1)      ------>ZmHOX2a(1)         <---------ANAC58            --------->ARR11(3)     ---------   tctagtcgaaaaaggtcctatgaaaagggtacatgagaagtatgctttcccgaaaactgctggtattagaagacatttttctcacaggtattacaaaaga  6353500                                                                         <---------At4g35610                                                                     <----------DOF2                    --------->ANAC58                       ----------->GT1             <------MYB83              --------->CCA1(2)                           <---------TOE2(3)      <---------ARR11(3)           <XXXXXXXXXXXXXXXXXXXXMIR863-5P    ---------->DOF2   --------->ATHB12--------->ANAC58 ----------->GT1--------->ANAC58         --------->ANAC46 <---------TOE1(3)    --------->ANAC58 ------->At4g35610  --------->ANAC58 --------->YAB1       --------->DAG2 --------->At4g35610 ------->CCA1(2)--------->ANAC58    <---------YAB1  <---------ANAC46<---------ANAC58   <------MYB46(1) ->DOF2  ----------->GT1       ----------->GT1    --------->MYB52(1)<---------ANAC58  --------->MYB59   gagatgaaaaatggagataagcaagacagaaattggttattatactcaaaagtatcggataaggtttattgcttttgctgcaagttatttggtcgagacc  6353600                                --------->ATHB12                                <--------ATHB1                                <---------ICU4                                -------->HAHB4                               --------->ICU4                            ------------>ATHB5                          <----------DOF2                        ----------->GT1                     <---------LBD16                    --------->MYB52(1)                  --------->MYB46(3)        --------->ARR11(3)                 --------->ANAC58         ---------->TaMYB80                --------->WOX13(1)  <XXXXXXXXXXXXXXXXXXXXMIR870                               <------             <-----------HVH21 <---------YAB1<XXXXXXXXXXXXXXXXXXXXMIR776                      <------          --------->At4g35610  <---------ATHB12                                               <------          <---------At4g35610 <---------TOE2(3)  <------ZmHOX2a(1)                        <---------ANAC58          <-------GAMYB--------->LBD16  <------ZmHOX2a(1)                        <-----------TGA1 --------->ANAC46--------->ANAC58 <---------WOX13(1)           ----------->RAV1(1)        <---------ANAC58   aagacgcgatgcagttgtcaagcaccgggtttaatgattggaggaatatcaggataagacttagccaacatgagactagtcatcgtcatattgtttgcat  6353700  Previous    Next  AGI:  At4g10200.1    Description:  hAT dimerisation domain-containing protein / transposase-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29638.1); similar to hypothetical protein OsI_008778 [Oryza sativa (indica cultivar-group)] (GB:EAY87545.1); contains InterPro domain Zinc finger, TTF-type (InterPro:IPR006580); contains InterPro domain HAT dimerisation; (InterPro:IPR008906) Range:  from: 6353168    to: 6355587    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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