Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------AHL20(2)                                                                      --------->ANAC46                                     --------->AHL20(2)           <---------AHL20(2)<---------AHL20(2)                                     <---------AHL20(2)         <---------YAB1   --------->AHL20(1)                                     <---------AHL20(1)      <---------AHL20(2)  <---------AHL20(1)                             --------->AHL20(2)              --------->AHL20(1)<---------ARR11(3)                             --------->YAB1                  --------->AHL20(2)<---------AHL20(1)                         <---------YAB1              <-----------GT1  --------->ANAC58 ------>TOE1(2)        <-----------GT1<---------AHL20(2)    --------->AHL20(2) --------->AHL20(1) ----->ANAC46   <---------YAB1 <-----------GT1     --------->AHL20(2) --------->ANAC58<---------AHL20(2)   cgtccgaatttttaagttatatttgttacaattatacaattttttttgcaaaattaaaccaattttattaaaacggaacaatatatatttttttttctca  6346100                                                                                            ---------                    --------->ARR14(2)                                                      <--------                    <---------ARR14(2)                                                      ---------             <---------ETT(1)                                                              --------->GLK1(1)             --------->ANAC46                  --------->YAB1                              <---------GLK1(1)          --------->GLK1(2)               --------->ARR14(2)                              ---------->DOF2          --------->ARR14(2)        ------>MYB83                     <-----------GT1    --------->LBD16          <---------ARR14(2)        --------->MYB52(1)           --------->YAB1     <---------ARR14(2)      ------>ZmHOX2a(2)             ------>MYB46(1)          --------->LBD16        --------->ARR14(2)     <------ZmHOX2a(2)            <---------MYB59            ----------->GT1   --------->At4g35610    --------->ARR14(2)            --------->AtMYB61       --------->MYB52(1)   ----------->RAV1(2)    <---------ARR14(2)      <xxxxxxxxxxxxxxxxsmallRNA(i)----------->HVH21      <---------At4g35610   aaaaccgatccgaatccgacactatccgaaccgaaaccaaaccgaatagtcataaaacccgaccggataataaactttcccatctgaatccgaaaatccg  6346200                    <---------ARR14(2)               <---------ARR14(2)        <---------ARR14(2)                                    --------->ANAC58        --------->ARR14(2)                                    --------->ANAC58   --------->GLK1(2)--------->ARR14(2)                      ---------->DOF2   --------->ARR14(2)                                    --------->ANAC58                        <---   <---------ARR14(2)<------ZmHOX2a(2)                   --------->ANAC58                    <------ZmHOX2a(1) >ARR14(2)     --------->ARR14(2)                   ------>NtERF2                 ----------->GT1<--- -ARR14(2)     --------->GLK1(2)               <---------At4g35610               <---------------AtSPL8 >GLK1(2)<------ZmHOX2a(2)                     --------->At4g35610   <----------ID1    ---------->DOF2   aaccgaatccgatccaaaatccgatccaaaatgtgaatgtccatacttaagctccgactaagcaaagcaatacaacaagagaaattgtacaaagaggaag  6346300                                                                                                 ----                                                                                              <------                                                                                              -------                                                                                             ------>MYB46(1)                                                                                             ------>MYB83                                                                                           --------->AtMYB61                                                                                          <---------MYB55(2)                                                                                          --------->MYB46(3)                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                <---------ATHB12                                                       --------->AtMYB61                ----------->HVH21--------->ATHB12                                     <---------MYB52(2)     <---------MYB52(1)          --------->ATHB51                                     --------->MYB46(3) ------------AtSPL8 <---------MYB59                                        <------------CBF------->GAMYB ------------AtSPL3<-----------------AGL1         --------->MYB46(3)  --------->MYB52(1) -------->P   tagtaccgataagtgccaatgacccaattttgcaactattgggccattttcaaacaccaatatcaggcccattaacagattgagagaaaccaacctccca  6346400          ----------->RAV1(1)          --------->MYB52(1)       <---------ARR11(3)       ------------------------>ANAC81 ----------->GT1             ----------->RAV1(1) <----------ID1           --------->ANAC58 ------>DOF2 ------->GAMYB--------->ANAC58                                        --------->ZAT6 ---------AGL15           --------->ANAC46                                     <-----------GT1 -------->AGL15         ---------->DOF2                    *TSS        ------>ZmHOX2a(1)   aaagagaaaaatcaacagaaccaaaacaaagccacagtatctctctctctctctctctcactcacatcgtctcctccattttcaccactaaaaccagacc  6346500                                                          --------->DEAR3(1)                                                     <-----------HVH21                                                     <-----------TGA1                                                    --------->ANAC58                                                    --------->O2 <---------ARR14(2)                                                    --------->ANAC58              <-------TEIL                  ----------------->AGL1            --------->ANAC55(2)         <---------ARR14(2)                  <-----------------AGL1            <---------ANAC55(2)         --------->ARR14(2)  <                 --------->ZAT18                    --------->bZIP60(2)         <---------GLK1(2)  <-              <---------ANAC58                      <---------O2 --------->ARR14(2)              ----              <---------ANAC58                      <---------bZIP60(1)        --------->At4g35610---        <----------DOF2       ----------->RAV1(1)   --------->bZIP60(1)        <---------At4g35610---       --------->TOE2(3)--------->HSFB2a(2)         --------->TGA1a           ----------->ARR10  ----     ------>MYB46(1)    <---------HSFB2a(2)        <-----------STF1        <-----------HVH21    <----     ------>MYB83<---------ZAT18--------->MYB46(3)<---------DOF5.7(2)     --------->ANAC58    ------>ZmHOX2a(1)  --------->HSFB2a(1) ====================RAV   --------->DOF5.7(2)       --------->ANAC58   <-------  <---------HSFB2a(1) ----------->RAV1(2)       --------->At5g28300      --------->SPL7    ------>ZmHOX2a(1)   aaaaaccttcctttattcgtgcccttctgggccaacaaatgttcacaagcggtaacgtcaccgctcgggtcttcgaacgtcagattcgaactcctcctcc  6346600        <---------MYB52(1)       <-----------HVH21       <-----------TGA1      <---------ANAC58      <---------ANAC58                                                                 <------MYB83  --------->ATERF1(1)                                                                  ----------->GT1 --------->ABI4(2)                                                                     <---------ANAC55(2) <---------ATERF1(1)                                                               <--------ATHB1 ------>NtERF2                                                                     --------->YAB1 ---------DEAR3(1)                                                          --------->TOE1(3) -----NtERF2                                                                --------->TOE2(3) ----->LBD16                                                           <----------DOF2 <------MYB46(1) ------>LBD16                                                      <---------CCA1(2)  --------->MYB59 --->NtERF2                                                    <---------ANAC58    --------->ATHB12 - ----->ANAC46                                             <----------DOF2<-----------GT1  >>>>>>>>>GT-1 -----LBD16                                    --------->TOE2(3) <---------CCA1(2)<---------ATHB12  - --ALFIN1         <---------CCA1(2)            --------->YAB1  <---------ANAC58   <---------YAB1    -   cggcgcttccgtcagtccccaaatctctctctctgtctcaatctctcaatctcaatctctcttttgcttatctctttaccttcaatgataggtaaatcgt  6346700                                                   <---------HSFB2a(1)                                                   --------->HSFB2a(1)                                                   --------->HSFC1(2)                                                  ------->TEIL    --------->ARR14(2)                                                  <---------ARR11(1)                                    --------->ANAC58       <------ZmHOX2a(2)   --------->ANAC46   <--                                    --------->ANAC46    --------->LBD16   <---------ARR14(2)     ----                                    --------->ANAC58  <---------LBD16     --------->ARR14(2)    -----           --------->ANAC46     <---------ALFIN1  --------->ARR14(2)  --------->LBD16      --------->HSFC1(2) -------->ANAC58           --------->ANAC58       <---------ARR14(2) --------->ANAC46      --------->HSFB2a(1) -------->ANAC58           --------->ANAC58       <-----------ARR10 <---------LBD16        <---------HSFC1(2) -------->ANAC46           --------->ANAC46      <---------CCA1(2)<---------ARR14(2)       <---------HSFB2a(1)   gcaagacacttctacgaaaacctagtcccaagctacacactctacgatgtcgaatctcccgatcactgtttccgcaaattcacagaagacggactcttcc  6346800                                                                                        -------->P                                                                                        ------>MYB83                                                                                        ------>MYB46(1)                                                                                    ------>MYB46(1)                                                                                    ------>MYB83                                                                                    --------->ANAC58                                                                                  --------->AtMYB61                                                                                  ------->GAMYB                                                                                  <---------ALFIN1                                                                                 <---------MYB55(2)           --------->ANAC46                                            --------->HSFC1(2)           --------->RAP2.6(2)                                         --------->HSFB2a(1)    ------>ZmHOX2a(1)         --------->At4g35610                                          <---------YAB1--------->ANAC58         <---------At4g35610                                          <---------ATHB12 <---------ALFIN1 -------ICU4            <---------ARR11(3)                        --------->MYB46(3)--------->ANAC46 -->ZmHOX2a(1)   ------->GAMYB                            --------->ANAC46    --------->MYB46(3)<---- ---->TOE2(3)   --------->MYB46(3)         ------>ZmHOX2a(1)   --------->MYB46(3)--------->MYB46(3)   tcattagtttcagccgtaaccatcaagaactcatagtctatcgtccttcttggctcacttactccacaaccgatgattccacaaccaccctacctcctct  6346900                                     --------->ZAT6                                --------->ANAC46                                --------->ANAC58                               ---------->DOF2                                --------->ANAC58                          <---------At4g35610                              <-----------GT1                             --------->At4g35610                         <----------DOF2         --------->WOX13(1)------->GAMYB                    <    --------->DEAR3(1)   <---------DAG2  <---------REM1(2)      --------->MYB52(1)                  < -----ALFIN1           <---------At4g35610     --------->WRKY18(1)<---------MYB52(2)        ------>ZmHOX2a(1)   acctcgccgtgcttcgaaattcgacagctttttcactcaactctactcagtcaatctcgcttcttctaacgaactcatctgcaaagacttcttcctctat  6347000  Previous    Next  AGI:  At4g10180.1    Description:  DET1 (DE-ETIOLATED 1); catalytic. Identical to Light-mediated development protein DET1 (DET1) [Arabidopsis Thaliana] (GB:P48732); similar to deetiolated 1-like protein [Solanum tuberosum] (GB:AAM18188.2); similar to Light-mediated development protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentation protein 2) (Protein dark green) (GB:Q9ZNU6); similar to Os01g0104600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041766.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928) Range:  from: 6346459    to: 6349272    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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