Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------YAB1                                                     --------->AHL20(1)                                                --------->AHL20(1)                                                <---------AHL20(1)       --------->YAB1                          <---------AHL20(2)       <------ZmHOX2a(1)                     --------->AHL20(2)     <---------TOE2(3)                   <---------AHL20(2)     <---------TOE1(3)    <---------AHL20(2) <---------AHL20(2)                     <---------YAB1 ---------YAB1           <---------AHL20(2)<---------AHL20(2)         <------ZmHOX2a(1)  <---------AHL20(2) --------AHL20(2)        --------->AHL20(2)--------->AHL20(2)         --------->YAB1<---------AHL20(2) ------->AHL20(1)    <---------YAB1      --------->AHL20(2)         <---------TOE1(3)   <---------AHL20(2) --------AHL20(1)    <---------AHL20(2)--------->AHL20(2)           <---------TOE2(3)   --------->AHL20(2) ------->AHL20(2)   <---------AHL20(2)--------->AHL20(1)        --------->YAB1     <---------AHL20(2) ------YAB1       <---------YAB1      <---------AHL20(1)   <---------TOE2(3)     <---------YAB1 ---->AHL20(2)   <---------AHL20(1)  --------->AHL20(2)   <-----------GT1       <---------AHL20(1) ---->AHL20(1)--------->TOE2(3)    --------->AHL20(2)<---------AHL20(2)      --------->TOE2(3) -->AHL20(1) <---------ICU4      --------->AHL20(2)  --------->AHL20(2)     --------->YAB1 ---AHL20(1) --------->YAB1      <---------AHL20(2)  <---------AHL20(1)     <---------ICU4          -   ttatattaaggataaacattatttttattaaatataaaaatatatatatatatattatattaacaatattaaggataaacattatttttattaaatataa  6308300                   <---------AHL20(1)                   --------->AHL20(1)                --------->AHL20(2)                <---------AHL20(2)      <---------ICU4              --------->AHL20(2)       --------->ICU4              <---------AHL20(2)      <---------AHL20(1)            --------->AHL20(2)        <---------AHL20(2)            <---------AHL20(2)     <---------AHL20(1)                                              <-          --------->AHL20(2)       --------->AHL20(2)                                          <-----          <---------AHL20(2)       <---------AHL20(2)                                          ------        <---------AHL20(2)         --------->AHL20(1)                                         <------        --------->AHL20(2)        --------->YAB1                                              <------      --------->AHL20(2)     --------->TOE2(3)                             <---------TOE2(3)  -------     --------->AHL20(1)     ----------->GT1                       <---------ARR14(2)          -------     <---------AHL20(1) <---------AHL20(2)                        --------->ARR14(2)      <---------AHL20(2)    --------->AHL20(2)  --------->AHL20(1) --------->AHL20(2)   --------->ARR11(3)        --------->AHL20(2)  --------->AHL20(2)    <---------AHL20(1) <---------AHL20(2)   <---------ARR11(3)       --------->AHL20(2) -------->AHL20(2)<---------AHL20(2) --------->YAB1             --------->AHL20(1)       <---------AHL20(2)   aaaaaaatatatatatatatatatattatattgttaatataatatttattttgtcattctgcaaaatatatccgattaacatatgttttaaaaaaattta  6308400        <-----------GT1  <---------AHL20(2)  <---------YAB1                                  <---------RVE1(1) --------AHL20(2)                                 <---------CCA1(1) ----AHL20(2)                                    --------->ARR11(3)               ---------->DOF2 --->AHL20(2)                                    <---------AHL20(1)         --------->TOE1(3) ---AHL20(2)                                     <---------ARR11(3)         --------->TOE2(3) ---AHL20(1)                                     --------->AHL20(1)     <------ZmHOX2a(1) -->AHL20(2)                                   <---------TOE2(3)    <---------MYB52(1) --------->GLK1(2) -->AHL20(1)            <---------YAB1         <---------YAB1  <-----------GT1  <---------YAB1   ttttataatttttcattttgcaagtttttattctgcaatttatgccattaagatattatgcaatgttaccgataggaaccttataaaagaatttgggctt  6308500                                                                                                    -                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              <------                 ---------->DOF2                                                            ---------                 --------->ZAT14                       <---------RAP2.6(3)                  <--------           ----------->RAV1(1)                         ------>NtERF2                      <------MYB46(1)         --------->At4g35610                           ----------->RAV1(1)                <------MYB83        --------->ANAC58                              <---------ETT(1)                  <--------P  <        --------->ANAC58         <---------ANAC46     --------->RAP2.6(2)           <-----------RAV1(2)    <-----------GT1          ------->TEIL            <xxxxxxxxxxxxxxxxsmallRNA(i) -------------------   cccatttcaccagcaccagtatagcccgatggacttcgtatagaaaccaaaattggccgacaaaaaaaaaaaactaaacccaaaatccaggttggatacg  6308600                                                                               *TSS                                                                              --------->ALFIN1                                                                            --------->TGA1a         <------------CBF                                                   <---------TGA1a <---------ICU4                                                        <---------At4g35610 -------->ICU4                                                        ------->TEIL ----->TGA2(2)                                                     <---------ANAC58 -------TGA1                                                       <---------ANAC55(2) --->bZIP60(2)                                                     --------->ANAC55(2) --->ANAC55(2)                                                     <---------ANAC58 --->ANAC55(1)                                                     <---------REM1(1) ----ANAC55(2)                                                     <---------ANAC46 --->ANAC46                                                        <---------bZIP60(1) --->ANAC58                        ------>NtERF2                   --------->bZIP60(1) --->ANAC58                       <---------PCF2                   <---------bZIP60(2) -----STF1                       <------NtERF2                    ----------->STF1 -TEIL------------>CBF          <---------MYB46(3)               <---------TGA2(2) >ARR14(2)                     <---------ANAC46                 ----------->HVH21 -ARR14(2)  --------->ZAT18    --------->ALFIN1                 ----------->TGA1--------->ALFIN1 ---------YAB1       ---------->DOF2       ----------->GT1    --------->At4g35610 ---->TaNAC69(2)    <---------WRKY45<------NtERF2             <---------At4g35610        <-----------GT1   tcatcatttccaattgccctagtcaaagacatggtgggggcattttagtaaaactaatagtttgagatgacgtagctcatgtgtgtggtattcaccagag  6308700                <---------MYB52(2)           ------>NtERF2            <--------P          --------->WRKY38(1)       <---------WOX13(1)          ==================================HOX2a_HOX2a        <---------At4g35610        <-------GAMYB                ------>ZmHOX2a(1)          <------ZmHOX2a(2)        --------->At4g35610       <---------MYB46(3)  --------->At4g35610             ------>NtERF2       <---------DEAR3(1)         --------->MYB55(2)  <---------ZAT2                  --------->LBD16      <------NtERF2-------->P    --------->ALFIN1     --------->ZAT2                <---------LBD16 <      <---------------------WRI1 <---------AtMYB61    <---------At4g35610   --------->TOE2(3)       <    <---------MYB46(3)          <---------MYB52(1) <---------ANAC58         --------->TOE1(3)      <-    <---------DEAR3(1)      --------->MYB52(1)     <---------ANAC58   ---------->ARF1<---------DEAR3(1)   aaatggtcgtcgctgactactaaccagagccatcggtggttgatttcgcgatttcgagctccattcctacttgtctcaccttaatctccggcgatcgaat  6308800            --------->WOX13(1)        --------->LBD16                                                                           <--        ----------->GT1                                                                      --------       <---------ANAC46    --------->ZAT14       <----------DOF2                             <-------      <---------LBD16      --------->ARR14(2) --------->ARR11(3)                        --------->ANAC55(2)    --------->ARR14(2)    <---------MYB52(1)  <---------ARR11(3)<---------ARR11(3)      <---------ANAC58    <---------ARR14(2)   --------->LBD16     <---------CCA1(2)  --------->ARR11(3)      <---------ANAC58 ---------LBD16 --------->WOX13(1)     <---------ANAC46    --------->YAB1               --------->ANAC46 ---------At5g28300     --------->ANAC46 ------>ZmHOX2a(1)<-------TEIL                  <---------ANAC55(1) ----------GT1<---------ATHB12      <----------DOF2  --------->HSFB2a(2)                <---------ANAC55(2)   ttcacggttccggttaatcaatctctccgtaaactcttctttcctgtatatctttcgagattcataaatcttcttcattttgagaagcatacgtgattat  6308900                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->YAB1                                                                 <---------ARR14(2)                                          --------->ANAC55(2)    <---------ARR11(3)                                          <---------ANAC55(2)    --------->ARR14(2)     =====================================HOX2a_HOX2a            --------->AGP1     ------>ZmHOX2a(1)                 <---------MYB52(1)        --------->ARR11(3)   ----------->RAV1(2)             <------ZmHOX2a(2)         ---------->DOF2      --------->bZIP60(2) -------ICU4                      --------->AGP1   <---------ZAT14     <---------ATHB12 ->ICU4                   <---------CCA1(2)        --------->ZAT14<------ZmHOX2a(2)    <---------YAB1 --YAB1            <---------GLK1(1)<-------TEIL   --------->ZAT18--------->CCA1(2)<-----------HVH21<   tcatttcctggttcaacatagaaatcgcatctcttagatccattaagtatttgttcactgaatcaaagatccaattatataggcatgtcatgactcagac  6309000                                                                       <----------DOF2                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                   <---------PCF2                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                 <---------MYB46(3)                                                                <---------ANAC46                                                              <-----------RAV1(1)                                                              ========================RAV                                                           --------->YAB1                                                           <------------ATHB5       --------->AtLEC2                                                           -------->ATHB1       <------NtERF2                                                           <--------ATHB1     --------->ALFIN1                                         <---------ANAC46  --------->ATHB12 --------->ZAT2                                <----------DOF2           <---------ATHB12  --------->At4g35610                          <---------ANAC58              --------->WOX13(1)  <---------At4g35610                          <---------ANAC58 <---------ANAC46<---------ICU4   <---------O2       <-----------GT1<----------DOF2 ------>ZmHOX2a(1)------------>ATHB5 <-----------RAV1(2) ------- <<<<<<ZML2        --------->GLK1(2)  <-----------RAV1(1) --------->ICU4<-----------HVH21---------->DOF2   tagaacaattcacatttggagactctttgcttctcttttcctgttgtgtattgagactcaatcattgtgggtgctttcaggtggccatggacaaagaagt  6309100                                                                       <-----------RAV1(2)                                                                    --------->ZAT18                                                   --------->ANAC46 ----------->HVH21                                         --------->ALFIN1         <---------At4g35610                                     ==============================================bZIP_DOF                                     ---------->DOF2              --------->At4g35610               --------->bZIP60(1) <------ZmHOX2a(2)      --------->ZAT14  --------->ALFIN1               <---------bZIP60(1)<---------ARR11(3)      <---------ZAT14--------->TGA1a        <----        ---------->DOF2      --------->ALFIN1 <---------YAB1 --------->ANAC58        ------>ZmHOX2a(2)   --------->ATHB12       <---------DEAR3(1)----------->GT1  --------->ANAC58      <---------ARR11(3) ---->GT1      ----------->HVH21  --------->ARR11(3)      <---------ZAT18<---------TGA1a --------->ZAT6   tacaaagattgaaagtgatgacacttcatcggtggagatcaaagtgttgttattcgccagagcacgagagctcacaggtgtgcctgatctaacactgaag  6309200  Previous    Next  AGI:  At4g10100.1    Description:  CNX7/SIR5; catalytic. similar to unnamed protein product [Vitis vinifera] (GB:CAO44583.1); contains InterPro domain Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155); contains InterPro domain ThiamineS; (InterPro:IPR003749); contains InterPro domain Molybdopterin converting factor, subunit 1; (InterPro:IPR010034); contains InterPro domain Beta-grasp fold, ferredoxin-type (InterPro:IPR012675) Range:  from: 6308679    to: 6309542    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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